RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
HDAC1-206ENST00000476391 TP53AIP1Q9HCN2 124 aa8.65□□□□□ -1.02
HDAC1-206ENST00000476391 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
HDAC1-206ENST00000476391 HRES1P13985 223 aa8.64□□□□□ -1.03
HDAC1-206ENST00000476391 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
HDAC1-206ENST00000476391 REG3GQ6UW15 175 aa8.64□□□□□ -1.03
HDAC1-206ENST00000476391 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
HDAC1-206ENST00000476391 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
HDAC1-206ENST00000476391 DOPEY1Q5JWR5 2465 aa8.62□□□□□ -1.03
HDAC1-206ENST00000476391 Q6ZR54 194 aa8.62□□□□□ -1.03
HDAC1-206ENST00000476391 H3BNG1 76 aa8.61□□□□□ -1.03
HDAC1-206ENST00000476391 CENPEQ02224 2701 aa8.61□□□□□ -1.03
HDAC1-206ENST00000476391 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
HDAC1-206ENST00000476391 NF1P21359 2839 aa8.6□□□□□ -1.03
HDAC1-206ENST00000476391 NAV2Q8IVL1 2488 aa8.6□□□□□ -1.03
HDAC1-206ENST00000476391 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
HDAC1-206ENST00000476391 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
HDAC1-206ENST00000476391 H0Y9J4 135 aa8.58□□□□□ -1.04
HDAC1-206ENST00000476391 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
HDAC1-206ENST00000476391 SONP18583 2426 aaKnown RBP8.57□□□□□ -1.04
HDAC1-206ENST00000476391 HELZ2Q9BYK8 2649 aaKnown RBP8.57□□□□□ -1.04
HDAC1-206ENST00000476391 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
HDAC1-206ENST00000476391 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
HDAC1-206ENST00000476391 MDFIQ99750 246 aa8.56□□□□□ -1.04
HDAC1-206ENST00000476391 POLQO75417 2590 aa8.55□□□□□ -1.04
HDAC1-206ENST00000476391 HIVEP2P31629 2446 aa8.55□□□□□ -1.04
HDAC1-206ENST00000476391 RTL8CO15255 209 aa8.55□□□□□ -1.04
HDAC1-206ENST00000476391 DEFB113Q30KQ7 82 aa8.54□□□□□ -1.04
HDAC1-206ENST00000476391 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.05
HDAC1-206ENST00000476391 FASNP49327 2511 aaKnown RBP8.52□□□□□ -1.05
HDAC1-206ENST00000476391 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
HDAC1-206ENST00000476391 PRLHP81277 87 aa8.51□□□□□ -1.05
HDAC1-206ENST00000476391 SPRR1BP22528 89 aa8.51□□□□□ -1.05
HDAC1-206ENST00000476391 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
HDAC1-206ENST00000476391 J3QKU1 62 aa8.5□□□□□ -1.05
HDAC1-206ENST00000476391 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
HDAC1-206ENST00000476391 F8P00451 2351 aa8.46□□□□□ -1.05
HDAC1-206ENST00000476391 KRTAP10-9P60411 292 aa8.46□□□□□ -1.06
HDAC1-206ENST00000476391 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
HDAC1-206ENST00000476391 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.06
HDAC1-206ENST00000476391 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
HDAC1-206ENST00000476391 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-206ENST00000476391 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
HDAC1-206ENST00000476391 ABCA12Q86UK0 2595 aa8.43□□□□□ -1.06
HDAC1-206ENST00000476391 ACYP2P14621 99 aa8.43□□□□□ -1.06
HDAC1-206ENST00000476391 KRTAP10-3P60369 221 aa8.42□□□□□ -1.06
HDAC1-206ENST00000476391 Q96NJ1 140 aa8.42□□□□□ -1.06
HDAC1-206ENST00000476391 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
HDAC1-206ENST00000476391 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
HDAC1-206ENST00000476391 A0A1B0GU69 56 aa8.4□□□□□ -1.06
HDAC1-206ENST00000476391 TENM2Q9NT68 2774 aa8.4□□□□□ -1.06
HDAC1-206ENST00000476391 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.07
HDAC1-206ENST00000476391 CASC10Q5T4H9 136 aa8.38□□□□□ -1.07
HDAC1-206ENST00000476391 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
HDAC1-206ENST00000476391 ALMS1Q8TCU4 4167 aa8.37□□□□□ -1.07
HDAC1-206ENST00000476391 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
HDAC1-206ENST00000476391 A0A1B0GVX0 72 aa8.37□□□□□ -1.07
HDAC1-206ENST00000476391 UQCR11O14957 56 aa8.36□□□□□ -1.07
HDAC1-206ENST00000476391 MTORP42345 2549 aa8.36□□□□□ -1.07
HDAC1-206ENST00000476391 CCDC168Q8NDH2 2452 aa8.35□□□□□ -1.07
HDAC1-206ENST00000476391 ITPR2Q14571 2701 aa8.35□□□□□ -1.07
HDAC1-206ENST00000476391 ITPR3Q14573 2671 aa8.35□□□□□ -1.07
HDAC1-206ENST00000476391 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
HDAC1-206ENST00000476391 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
HDAC1-206ENST00000476391 A0A096LNI7 61 aa8.33□□□□□ -1.08
HDAC1-206ENST00000476391 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
HDAC1-206ENST00000476391 HIVEP1P15822 2718 aa8.32□□□□□ -1.08
HDAC1-206ENST00000476391 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
HDAC1-206ENST00000476391 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
HDAC1-206ENST00000476391 KRTAP1-1Q07627 177 aa8.29□□□□□ -1.08
HDAC1-206ENST00000476391 J3QL48 77 aa8.29□□□□□ -1.08
HDAC1-206ENST00000476391 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
HDAC1-206ENST00000476391 PDZD2O15018 2839 aa8.28□□□□□ -1.08
HDAC1-206ENST00000476391 BAHCC1Q9P281 2608 aa8.27□□□□□ -1.09
HDAC1-206ENST00000476391 K7EIL1 84 aa8.27□□□□□ -1.09
HDAC1-206ENST00000476391 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
HDAC1-206ENST00000476391 VWFP04275 2813 aa8.26□□□□□ -1.09
HDAC1-206ENST00000476391 KRTAP11-1Q8IUC1 163 aa8.25□□□□□ -1.09
HDAC1-206ENST00000476391 Q5W150 140 aa8.24□□□□□ -1.09
HDAC1-206ENST00000476391 ZNF861PO60384 105 aa8.23□□□□□ -1.09
HDAC1-206ENST00000476391 PKD1L1Q8TDX9 2849 aa8.22□□□□□ -1.09
HDAC1-206ENST00000476391 DNAH1Q9P2D7 4330 aa8.22□□□□□ -1.09
HDAC1-206ENST00000476391 C1orf134Q5TEV5 83 aa8.21□□□□□ -1.09
HDAC1-206ENST00000476391 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.09
HDAC1-206ENST00000476391 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
HDAC1-206ENST00000476391 IGLV9-49A0A0B4J1Y8 123 aa8.19□□□□□ -1.1
HDAC1-206ENST00000476391 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
HDAC1-206ENST00000476391 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
HDAC1-206ENST00000476391 ROMO1P60602 79 aa8.15□□□□□ -1.1
HDAC1-206ENST00000476391 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-206ENST00000476391 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
HDAC1-206ENST00000476391 ACANP16112 2415 aa8.14□□□□□ -1.11
HDAC1-206ENST00000476391 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
HDAC1-206ENST00000476391 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
HDAC1-206ENST00000476391 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
HDAC1-206ENST00000476391 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
HDAC1-206ENST00000476391 SMR3AQ99954 134 aa8.1□□□□□ -1.11
HDAC1-206ENST00000476391 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
HDAC1-206ENST00000476391 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
HDAC1-206ENST00000476391 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms