RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
SNX13-207ENST00000475800 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
SNX13-207ENST00000475800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.76□□□□□ -1.01
SNX13-207ENST00000475800 M0R143 59 aa8.75□□□□□ -1.01
SNX13-207ENST00000475800 SPINK1P00995 79 aa8.75□□□□□ -1.01
SNX13-207ENST00000475800 Q6ZQY7 126 aa8.75□□□□□ -1.01
SNX13-207ENST00000475800 A0A1B0GX51 115 aa8.74□□□□□ -1.01
SNX13-207ENST00000475800 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
SNX13-207ENST00000475800 K7ERJ3 54 aa8.73□□□□□ -1.01
SNX13-207ENST00000475800 COX6CP09669 75 aa8.73□□□□□ -1.01
SNX13-207ENST00000475800 OCIAD2Q56VL3 154 aa8.73□□□□□ -1.01
SNX13-207ENST00000475800 Q8N377 158 aa8.73□□□□□ -1.01
SNX13-207ENST00000475800 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
SNX13-207ENST00000475800 TRIAP1O43715 76 aa8.71□□□□□ -1.02
SNX13-207ENST00000475800 PSMB2P49721 201 aa8.71□□□□□ -1.02
SNX13-207ENST00000475800 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
SNX13-207ENST00000475800 F8WEM9 126 aa8.7□□□□□ -1.02
SNX13-207ENST00000475800 PRR4Q16378 134 aa8.68□□□□□ -1.02
SNX13-207ENST00000475800 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
SNX13-207ENST00000475800 CD164Q04900 197 aa8.66□□□□□ -1.02
SNX13-207ENST00000475800 SNHG12Q9BXW3 62 aa8.66□□□□□ -1.02
SNX13-207ENST00000475800 DNAL4O96015 105 aa8.65□□□□□ -1.02
SNX13-207ENST00000475800 H3BQ85 93 aa8.64□□□□□ -1.03
SNX13-207ENST00000475800 Q6JHZ5 121 aa8.64□□□□□ -1.03
SNX13-207ENST00000475800 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
SNX13-207ENST00000475800 IGLV8-61A0A075B6I0 122 aa8.63□□□□□ -1.03
SNX13-207ENST00000475800 SCGB1C2P0DMR2 95 aa8.63□□□□□ -1.03
SNX13-207ENST00000475800 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
SNX13-207ENST00000475800 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
SNX13-207ENST00000475800 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
SNX13-207ENST00000475800 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
SNX13-207ENST00000475800 ORMDL1Q9P0S3 153 aa8.6□□□□□ -1.03
SNX13-207ENST00000475800 TRACP01848 142 aa8.59□□□□□ -1.03
SNX13-207ENST00000475800 HRCT1Q6UXD1 115 aa8.59□□□□□ -1.03
SNX13-207ENST00000475800 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
SNX13-207ENST00000475800 LST1O00453 97 aa8.57□□□□□ -1.04
SNX13-207ENST00000475800 FABP2P12104 132 aa8.57□□□□□ -1.04
SNX13-207ENST00000475800 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
SNX13-207ENST00000475800 BATFQ16520 125 aa8.57□□□□□ -1.04
SNX13-207ENST00000475800 Q5XG85 94 aa8.57□□□□□ -1.04
SNX13-207ENST00000475800 MUC2Q02817 5179 aa8.57□□□□□ -1.04
SNX13-207ENST00000475800 TMEM256-PLSCR3K7ERE1 68 aa8.56□□□□□ -1.04
SNX13-207ENST00000475800 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
SNX13-207ENST00000475800 IGFL1Q6UW32 110 aa8.55□□□□□ -1.04
SNX13-207ENST00000475800 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
SNX13-207ENST00000475800 A0A0G2JQZ4 141 aa8.53□□□□□ -1.04
SNX13-207ENST00000475800 H3BMG7 143 aa8.52□□□□□ -1.05
SNX13-207ENST00000475800 H3BUT2 72 aa8.52□□□□□ -1.05
SNX13-207ENST00000475800 TCL1BO95988 128 aa8.52□□□□□ -1.05
SNX13-207ENST00000475800 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
SNX13-207ENST00000475800 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
SNX13-207ENST00000475800 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
SNX13-207ENST00000475800 NAA38Q9BRA0 125 aaKnown RBP8.5□□□□□ -1.05
SNX13-207ENST00000475800 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
SNX13-207ENST00000475800 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
SNX13-207ENST00000475800 Q6Q795 121 aa8.49□□□□□ -1.05
SNX13-207ENST00000475800 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
SNX13-207ENST00000475800 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
SNX13-207ENST00000475800 TEN1Q86WV5 123 aa8.47□□□□□ -1.05
SNX13-207ENST00000475800 BAALC-AS2P0C853 105 aa8.46□□□□□ -1.06
SNX13-207ENST00000475800 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
SNX13-207ENST00000475800 TAX1BP3O14907 124 aa8.45□□□□□ -1.06
SNX13-207ENST00000475800 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
SNX13-207ENST00000475800 ANKRD29Q8N6D5 301 aa8.45□□□□□ -1.06
SNX13-207ENST00000475800 SS18L2Q9UHA2 77 aa8.45□□□□□ -1.06
SNX13-207ENST00000475800 C1orf195Q5TG92 126 aa8.44□□□□□ -1.06
SNX13-207ENST00000475800 A0A1W2PPM0 123 aa8.42□□□□□ -1.06
SNX13-207ENST00000475800 RBM3P98179 157 aaKnown RBP8.41□□□□□ -1.06
SNX13-207ENST00000475800 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
SNX13-207ENST00000475800 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
SNX13-207ENST00000475800 TRBV7-4A0A0J9YYF1 115 aa8.39□□□□□ -1.07
SNX13-207ENST00000475800 A0A1B0GV72 72 aa8.39□□□□□ -1.07
SNX13-207ENST00000475800 DSCR8Q96T75 97 aa8.39□□□□□ -1.07
SNX13-207ENST00000475800 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
SNX13-207ENST00000475800 JMJD7-PLA2G4BH0Y9G9 81 aa8.38□□□□□ -1.07
SNX13-207ENST00000475800 A0A087WSZ3 146 aa8.37□□□□□ -1.07
SNX13-207ENST00000475800 C9JAW5 83 aa8.37□□□□□ -1.07
SNX13-207ENST00000475800 CCKP06307 115 aa8.37□□□□□ -1.07
SNX13-207ENST00000475800 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
SNX13-207ENST00000475800 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
SNX13-207ENST00000475800 PCP4L1A6NKN8 68 aa8.35□□□□□ -1.07
SNX13-207ENST00000475800 H3BT86 120 aa8.34□□□□□ -1.07
SNX13-207ENST00000475800 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
SNX13-207ENST00000475800 PDE6GP18545 87 aa8.33□□□□□ -1.08
SNX13-207ENST00000475800 SPCS1Q9Y6A9 102 aa8.33□□□□□ -1.08
SNX13-207ENST00000475800 XP32Q5T750 250 aa8.31□□□□□ -1.08
SNX13-207ENST00000475800 VPS25Q9BRG1 176 aa8.31□□□□□ -1.08
SNX13-207ENST00000475800 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
SNX13-207ENST00000475800 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
SNX13-207ENST00000475800 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
SNX13-207ENST00000475800 A0A1B0GW54 56 aa8.28□□□□□ -1.08
SNX13-207ENST00000475800 SEC61BP60468 96 aaKnown RBP8.28□□□□□ -1.08
SNX13-207ENST00000475800 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
SNX13-207ENST00000475800 Q6ZQT0 140 aa8.27□□□□□ -1.09
SNX13-207ENST00000475800 Q96NJ1 140 aa8.26□□□□□ -1.09
SNX13-207ENST00000475800 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
SNX13-207ENST00000475800 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
SNX13-207ENST00000475800 K7EP34 96 aa8.23□□□□□ -1.09
SNX13-207ENST00000475800 GTF2H5Q6ZYL4 71 aa8.22□□□□□ -1.09
SNX13-207ENST00000475800 SIGMAR1Q99720 223 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms