RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
CCDC93-208ENST00000474546 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
CCDC93-208ENST00000474546 Q8N377 158 aa5.26□□□□□ -1.57
CCDC93-208ENST00000474546 HIGD2AQ9BW72 106 aa5.26□□□□□ -1.57
CCDC93-208ENST00000474546 KRTAP4-5Q9BYR2 181 aa5.26□□□□□ -1.57
CCDC93-208ENST00000474546 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
CCDC93-208ENST00000474546 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
CCDC93-208ENST00000474546 UBE2BP63146 152 aa5.25□□□□□ -1.57
CCDC93-208ENST00000474546 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
CCDC93-208ENST00000474546 LINC00474Q9P2X8 69 aa5.25□□□□□ -1.57
CCDC93-208ENST00000474546 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
CCDC93-208ENST00000474546 KRTAP26-1Q6PEX3 210 aa5.24□□□□□ -1.57
CCDC93-208ENST00000474546 C15orf56Q8N910 161 aa5.24□□□□□ -1.57
CCDC93-208ENST00000474546 Q9BRP9 147 aa5.24□□□□□ -1.57
CCDC93-208ENST00000474546 IGLV8-61A0A075B6I0 122 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 IGLV1-50A0A075B6I6 118 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 K7EIL1 84 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 HTN3P15516 51 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 UBE2AP49459 152 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 SEC61GP60059 68 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
CCDC93-208ENST00000474546 Q6ZRP5 223 aa5.22□□□□□ -1.57
CCDC93-208ENST00000474546 A0A1W2PNM2 257 aa5.21□□□□□ -1.58
CCDC93-208ENST00000474546 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
CCDC93-208ENST00000474546 DNAH10OSP0CZ25 163 aa5.21□□□□□ -1.58
CCDC93-208ENST00000474546 Q8N9L7 120 aa5.21□□□□□ -1.58
CCDC93-208ENST00000474546 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
CCDC93-208ENST00000474546 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.2□□□□□ -1.58
CCDC93-208ENST00000474546 IGKV2D-24A0A075B6R9 120 aa5.2□□□□□ -1.58
CCDC93-208ENST00000474546 TRAV22A0A0B4J277 110 aa5.2□□□□□ -1.58
CCDC93-208ENST00000474546 OXLD1Q5BKU9 147 aa5.2□□□□□ -1.58
CCDC93-208ENST00000474546 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
CCDC93-208ENST00000474546 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
CCDC93-208ENST00000474546 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 PSCAO43653 123 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 DSCR10P59022 87 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 LINC00588Q9Y4M8 146 aa5.19□□□□□ -1.58
CCDC93-208ENST00000474546 CD164Q04900 197 aa5.18□□□□□ -1.58
CCDC93-208ENST00000474546 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
CCDC93-208ENST00000474546 WFDC10BQ8IUB3 73 aa5.18□□□□□ -1.58
CCDC93-208ENST00000474546 LINC00208Q96KT6 92 aa5.18□□□□□ -1.58
CCDC93-208ENST00000474546 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
CCDC93-208ENST00000474546 H0Y9J4 135 aa5.17□□□□□ -1.58
CCDC93-208ENST00000474546 NDUFS5O43920 106 aa5.17□□□□□ -1.58
CCDC93-208ENST00000474546 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
CCDC93-208ENST00000474546 K7EQZ3 153 aa5.16□□□□□ -1.58
CCDC93-208ENST00000474546 DEFB4AO15263 64 aa5.16□□□□□ -1.58
CCDC93-208ENST00000474546 RPL37AP61513 92 aaKnown RBP5.16□□□□□ -1.58
CCDC93-208ENST00000474546 KMT2AQ03164 3969 aa5.16□□□□□ -1.58
CCDC93-208ENST00000474546 C14orf177Q52M58 125 aa5.15□□□□□ -1.59
CCDC93-208ENST00000474546 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.59
CCDC93-208ENST00000474546 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
CCDC93-208ENST00000474546 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.59
CCDC93-208ENST00000474546 A8MWP4 228 aa5.14□□□□□ -1.59
CCDC93-208ENST00000474546 SPRR1BP22528 89 aa5.14□□□□□ -1.59
CCDC93-208ENST00000474546 KRTAP10-3P60369 221 aa5.14□□□□□ -1.59
CCDC93-208ENST00000474546 SERTAD4-AS1Q5TG53 156 aa5.14□□□□□ -1.59
CCDC93-208ENST00000474546 CASC2Q6XLA1 102 aa5.14□□□□□ -1.59
CCDC93-208ENST00000474546 H0Y9P7 68 aa5.13□□□□□ -1.59
CCDC93-208ENST00000474546 Q75L30 129 aa5.13□□□□□ -1.59
CCDC93-208ENST00000474546 DEFB131BA0A096LNP1 70 aa5.12□□□□□ -1.59
CCDC93-208ENST00000474546 LOC101927531A0A1B0GV80 90 aa5.12□□□□□ -1.59
CCDC93-208ENST00000474546 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
CCDC93-208ENST00000474546 MOBPQ13875 183 aa5.12□□□□□ -1.59
CCDC93-208ENST00000474546 C11orf45Q8TAV5 145 aa5.12□□□□□ -1.59
CCDC93-208ENST00000474546 HSPG2P98160 4391 aa5.11□□□□□ -1.59
CCDC93-208ENST00000474546 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
CCDC93-208ENST00000474546 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
CCDC93-208ENST00000474546 C16orf90A8MZG2 172 aa5.1□□□□□ -1.59
CCDC93-208ENST00000474546 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
CCDC93-208ENST00000474546 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
CCDC93-208ENST00000474546 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
CCDC93-208ENST00000474546 PSPHP1O15172 72 aa5.09□□□□□ -1.59
CCDC93-208ENST00000474546 CNBPP62633 177 aaKnown RBP5.09□□□□□ -1.59
CCDC93-208ENST00000474546 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
CCDC93-208ENST00000474546 A0A087WSZ3 146 aa5.08□□□□□ -1.6
CCDC93-208ENST00000474546 Q5VV11 94 aa5.08□□□□□ -1.6
CCDC93-208ENST00000474546 C9orf163Q8N9P6 203 aa5.08□□□□□ -1.6
CCDC93-208ENST00000474546 DYNC1H1Q14204 4646 aaKnown RBP5.07□□□□□ -1.6
CCDC93-208ENST00000474546 PHF5AQ7RTV0 110 aaKnown RBP5.07□□□□□ -1.6
CCDC93-208ENST00000474546 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
CCDC93-208ENST00000474546 ST20-AS1Q8NBB2 130 aa5.07□□□□□ -1.6
CCDC93-208ENST00000474546 CDC42SE1Q9NRR8 79 aa5.07□□□□□ -1.6
CCDC93-208ENST00000474546 MUC2Q02817 5179 aa5.07□□□□□ -1.6
CCDC93-208ENST00000474546 A0A087X002 238 aa5.06□□□□□ -1.6
CCDC93-208ENST00000474546 A8MUN3 132 aa5.06□□□□□ -1.6
CCDC93-208ENST00000474546 RNF213Q63HN8 5207 aa5.06□□□□□ -1.6
CCDC93-208ENST00000474546 A6NED7 52 aa5.05□□□□□ -1.6
CCDC93-208ENST00000474546 ASB16-AS1Q495Z4 193 aa5.05□□□□□ -1.6
CCDC93-208ENST00000474546 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
CCDC93-208ENST00000474546 LINC00472Q9H8W2 130 aa5.05□□□□□ -1.6
CCDC93-208ENST00000474546 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
CCDC93-208ENST00000474546 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
CCDC93-208ENST00000474546 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
CCDC93-208ENST00000474546 COA5Q86WW8 74 aa5.04□□□□□ -1.6
CCDC93-208ENST00000474546 CDK2AP2O75956 126 aa5.03□□□□□ -1.6
CCDC93-208ENST00000474546 Q6ZR54 194 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms