RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 H0Y9P7 68 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 M0R2N4 97 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 LYNX1P0DP58 116 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 PRB4P10163 310 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-209ENST00000474157 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 COA5Q86WW8 74 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 ROMO1P60602 79 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 Q8IZM0 81 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 Q8NAQ8 132 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
GPNMB-209ENST00000474157 PRB2P02812 416 aaPredicted RBP4.71□□□□□ -1.66
GPNMB-209ENST00000474157 C9orf163Q8N9P6 203 aa4.71□□□□□ -1.66
GPNMB-209ENST00000474157 DEFB108BQ8NET1 73 aa4.71□□□□□ -1.66
GPNMB-209ENST00000474157 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
GPNMB-209ENST00000474157 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
GPNMB-209ENST00000474157 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
GPNMB-209ENST00000474157 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
GPNMB-209ENST00000474157 Q6ZQY7 126 aa4.7□□□□□ -1.66
GPNMB-209ENST00000474157 LINC00612Q8N6U2 182 aa4.7□□□□□ -1.66
GPNMB-209ENST00000474157 MSMBP08118 114 aa4.69□□□□□ -1.66
GPNMB-209ENST00000474157 DEFB112Q30KQ8 113 aa4.68□□□□□ -1.66
GPNMB-209ENST00000474157 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
GPNMB-209ENST00000474157 MUC4Q99102 2169 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 ODF3BA8MYP8 253 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 H3BUA1 57 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 IGLV6-57P01721 117 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 IGHV3-11P01762 117 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 SPINK7P58062 85 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 TOMM7Q9P0U1 55 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 MINOS1-NBL1R4GNA1 71 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 NOTCH3Q9UM47 2321 aa4.67□□□□□ -1.66
GPNMB-209ENST00000474157 PLXNB1O43157 2135 aa4.66□□□□□ -1.66
GPNMB-209ENST00000474157 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
GPNMB-209ENST00000474157 A0A087WSZ3 146 aa4.66□□□□□ -1.66
GPNMB-209ENST00000474157 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
GPNMB-209ENST00000474157 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
GPNMB-209ENST00000474157 DEFB131BA0A096LNP1 70 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 PRB3Q04118 309 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-209ENST00000474157 PRR4Q16378 134 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 REG3GQ6UW15 175 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 Q8N9L7 120 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 ST20-AS1Q8NBB2 130 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 USMG5Q96IX5 58 aa4.65□□□□□ -1.67
GPNMB-209ENST00000474157 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
GPNMB-209ENST00000474157 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
GPNMB-209ENST00000474157 LYPD2Q6UXB3 125 aa4.64□□□□□ -1.67
GPNMB-209ENST00000474157 SPRR4Q96PI1 79 aa4.64□□□□□ -1.67
GPNMB-209ENST00000474157 RYR2Q92736 4967 aa4.63□□□□□ -1.67
GPNMB-209ENST00000474157 TENM2Q9NT68 2774 aa4.63□□□□□ -1.67
GPNMB-209ENST00000474157 IGKV2D-24A0A075B6R9 120 aa4.62□□□□□ -1.67
GPNMB-209ENST00000474157 UQCR11O14957 56 aa4.62□□□□□ -1.67
GPNMB-209ENST00000474157 KRTAP10-3P60369 221 aa4.62□□□□□ -1.67
GPNMB-209ENST00000474157 Q8N9W7 124 aa4.62□□□□□ -1.67
GPNMB-209ENST00000474157 LINC00959A0A1B0GUT2 108 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 A8MTW9 85 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 DSCR10P59022 87 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 Q6ZR54 194 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 Q8NDZ9 215 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
GPNMB-209ENST00000474157 HYDINQ4G0P3 5121 aa4.6□□□□□ -1.67
GPNMB-209ENST00000474157 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
GPNMB-209ENST00000474157 RHPN1-AS1Q9BWJ2 59 aa4.6□□□□□ -1.67
GPNMB-209ENST00000474157 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
GPNMB-209ENST00000474157 KLK12Q9UKR0 248 aa4.6□□□□□ -1.67
GPNMB-209ENST00000474157 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
GPNMB-209ENST00000474157 C1orf137Q5JT78 98 aa4.59□□□□□ -1.67
GPNMB-209ENST00000474157 Q8NBF4 154 aa4.59□□□□□ -1.67
GPNMB-209ENST00000474157 CASC10Q5T4H9 136 aa4.58□□□□□ -1.68
GPNMB-209ENST00000474157 A0A0J9YWU9 116 aa4.57□□□□□ -1.68
GPNMB-209ENST00000474157 K7EIL1 84 aa4.57□□□□□ -1.68
GPNMB-209ENST00000474157 COX7A1P24310 79 aa4.57□□□□□ -1.68
GPNMB-209ENST00000474157 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
GPNMB-209ENST00000474157 RYR1P21817 5038 aa4.57□□□□□ -1.68
GPNMB-209ENST00000474157 HERC2O95714 4834 aa4.56□□□□□ -1.68
GPNMB-209ENST00000474157 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
GPNMB-209ENST00000474157 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
GPNMB-209ENST00000474157 SACSQ9NZJ4 4579 aa4.55□□□□□ -1.68
GPNMB-209ENST00000474157 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
GPNMB-209ENST00000474157 K7ERS5 55 aa4.55□□□□□ -1.68
GPNMB-209ENST00000474157 REG3AQ06141 175 aa4.55□□□□□ -1.68
GPNMB-209ENST00000474157 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
GPNMB-209ENST00000474157 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
GPNMB-209ENST00000474157 IGLV1-50A0A075B6I6 118 aa4.54□□□□□ -1.68
GPNMB-209ENST00000474157 K7EQZ3 153 aa4.54□□□□□ -1.68
GPNMB-209ENST00000474157 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
GPNMB-209ENST00000474157 BRD3OSQ6XYD6 125 aa4.54□□□□□ -1.68
GPNMB-209ENST00000474157 SPINK13Q1W4C9 94 aa4.53□□□□□ -1.68
GPNMB-209ENST00000474157 PRR34Q9NV39 138 aa4.53□□□□□ -1.68
GPNMB-209ENST00000474157 DHRS4-AS1Q9P1J3 65 aa4.53□□□□□ -1.68
GPNMB-209ENST00000474157 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
GPNMB-209ENST00000474157 A8MWP4 228 aa4.52□□□□□ -1.69
GPNMB-209ENST00000474157 ZNF861PO60384 105 aa4.52□□□□□ -1.69
GPNMB-209ENST00000474157 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
GPNMB-209ENST00000474157 A0A1B0GU69 56 aa4.51□□□□□ -1.69
GPNMB-209ENST00000474157 HRES1P13985 223 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms