RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.73□□□□□ -1.17
TPM3-216ENST00000473036 PPDPFLQ8WWR9 84 aa7.73□□□□□ -1.17
TPM3-216ENST00000473036 LST1O00453 97 aa7.71□□□□□ -1.18
TPM3-216ENST00000473036 SPRR4Q96PI1 79 aa7.71□□□□□ -1.18
TPM3-216ENST00000473036 GTF2H5Q6ZYL4 71 aa7.7□□□□□ -1.18
TPM3-216ENST00000473036 CRYGAP11844 174 aa7.68□□□□□ -1.18
TPM3-216ENST00000473036 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
TPM3-216ENST00000473036 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
TPM3-216ENST00000473036 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
TPM3-216ENST00000473036 NAA38Q9BRA0 125 aaKnown RBP7.68□□□□□ -1.18
TPM3-216ENST00000473036 SPCS1Q9Y6A9 102 aa7.68□□□□□ -1.18
TPM3-216ENST00000473036 TEX49A0A1B0GTD5 131 aa7.67□□□□□ -1.18
TPM3-216ENST00000473036 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
TPM3-216ENST00000473036 ORMDL1Q9P0S3 153 aa7.67□□□□□ -1.18
TPM3-216ENST00000473036 TCL1BO95988 128 aa7.66□□□□□ -1.18
TPM3-216ENST00000473036 Q6ZQY7 126 aa7.66□□□□□ -1.18
TPM3-216ENST00000473036 IGLV5-48A0A075B6I7 105 aa7.65□□□□□ -1.18
TPM3-216ENST00000473036 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
TPM3-216ENST00000473036 FAM218AQ96MZ4 157 aa7.65□□□□□ -1.18
TPM3-216ENST00000473036 ST20-AS1Q8NBB2 130 aa7.64□□□□□ -1.19
TPM3-216ENST00000473036 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
TPM3-216ENST00000473036 K7EP34 96 aa7.63□□□□□ -1.19
TPM3-216ENST00000473036 SPRR1BP22528 89 aa7.63□□□□□ -1.19
TPM3-216ENST00000473036 LAMTOR3Q9UHA4 124 aa7.63□□□□□ -1.19
TPM3-216ENST00000473036 A0A0U1RQV1 116 aa7.62□□□□□ -1.19
TPM3-216ENST00000473036 GAGE2AQ6NT46 116 aa7.62□□□□□ -1.19
TPM3-216ENST00000473036 H3BMG7 143 aa7.61□□□□□ -1.19
TPM3-216ENST00000473036 UBE2V1Q13404 147 aa7.61□□□□□ -1.19
TPM3-216ENST00000473036 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
TPM3-216ENST00000473036 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
TPM3-216ENST00000473036 F8WEM9 126 aa7.6□□□□□ -1.19
TPM3-216ENST00000473036 H3BT86 120 aa7.6□□□□□ -1.19
TPM3-216ENST00000473036 BAALC-AS2P0C853 105 aa7.6□□□□□ -1.19
TPM3-216ENST00000473036 C9JAW5 83 aa7.59□□□□□ -1.19
TPM3-216ENST00000473036 F8W1H4 67 aa7.59□□□□□ -1.19
TPM3-216ENST00000473036 Q8N377 158 aa7.59□□□□□ -1.19
TPM3-216ENST00000473036 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
TPM3-216ENST00000473036 MUC2Q02817 5179 aa7.58□□□□□ -1.2
TPM3-216ENST00000473036 JMJD7-PLA2G4BH0Y9G9 81 aa7.57□□□□□ -1.2
TPM3-216ENST00000473036 LINC01547P58512 204 aaPredicted RBP7.57□□□□□ -1.2
TPM3-216ENST00000473036 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
TPM3-216ENST00000473036 ANKRD29Q8N6D5 301 aa7.56□□□□□ -1.2
TPM3-216ENST00000473036 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
TPM3-216ENST00000473036 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
TPM3-216ENST00000473036 SSBP3-AS1Q7Z2R9 100 aa7.55□□□□□ -1.2
TPM3-216ENST00000473036 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
TPM3-216ENST00000473036 Q6JHZ5 121 aa7.54□□□□□ -1.2
TPM3-216ENST00000473036 Q8NBF4 154 aa7.54□□□□□ -1.2
TPM3-216ENST00000473036 MOBPQ13875 183 aa7.53□□□□□ -1.2
TPM3-216ENST00000473036 A0A1B0GV90 55 aa7.52□□□□□ -1.21
TPM3-216ENST00000473036 PDE6GP18545 87 aa7.52□□□□□ -1.21
TPM3-216ENST00000473036 SMIM29Q86T20 159 aa7.52□□□□□ -1.21
TPM3-216ENST00000473036 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
TPM3-216ENST00000473036 RBM3P98179 157 aaKnown RBP7.51□□□□□ -1.21
TPM3-216ENST00000473036 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
TPM3-216ENST00000473036 DSCR8Q96T75 97 aa7.5□□□□□ -1.21
TPM3-216ENST00000473036 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
TPM3-216ENST00000473036 C4orf48Q5BLP8 95 aa7.48□□□□□ -1.21
TPM3-216ENST00000473036 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
TPM3-216ENST00000473036 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
TPM3-216ENST00000473036 PRR4Q16378 134 aa7.47□□□□□ -1.21
TPM3-216ENST00000473036 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
TPM3-216ENST00000473036 A0A1B0GW54 56 aa7.46□□□□□ -1.22
TPM3-216ENST00000473036 CD164Q04900 197 aa7.46□□□□□ -1.22
TPM3-216ENST00000473036 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.22
TPM3-216ENST00000473036 TEN1Q86WV5 123 aa7.45□□□□□ -1.22
TPM3-216ENST00000473036 A0A0G2JQZ4 141 aa7.44□□□□□ -1.22
TPM3-216ENST00000473036 LOC110117498A0A087WWA1 95 aa7.43□□□□□ -1.22
TPM3-216ENST00000473036 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
TPM3-216ENST00000473036 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
TPM3-216ENST00000473036 MTURNQ8N3F0 131 aa7.43□□□□□ -1.22
TPM3-216ENST00000473036 TRBV7-4A0A0J9YYF1 115 aa7.42□□□□□ -1.22
TPM3-216ENST00000473036 SPINK1P00995 79 aa7.42□□□□□ -1.22
TPM3-216ENST00000473036 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
TPM3-216ENST00000473036 Q6Q795 121 aa7.42□□□□□ -1.22
TPM3-216ENST00000473036 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
TPM3-216ENST00000473036 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
TPM3-216ENST00000473036 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
TPM3-216ENST00000473036 CCKP06307 115 aa7.39□□□□□ -1.23
TPM3-216ENST00000473036 HRCT1Q6UXD1 115 aa7.39□□□□□ -1.23
TPM3-216ENST00000473036 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
TPM3-216ENST00000473036 C14orf132Q9NPU4 83 aa7.38□□□□□ -1.23
TPM3-216ENST00000473036 Q6ZQT0 140 aa7.37□□□□□ -1.23
TPM3-216ENST00000473036 SS18L2Q9UHA2 77 aa7.37□□□□□ -1.23
TPM3-216ENST00000473036 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
TPM3-216ENST00000473036 A0A1B0GV72 72 aa7.36□□□□□ -1.23
TPM3-216ENST00000473036 J3QR89 54 aa7.36□□□□□ -1.23
TPM3-216ENST00000473036 Q5XG85 94 aa7.35□□□□□ -1.23
TPM3-216ENST00000473036 TRBV7-7A0A0K0K1E9 115 aa7.34□□□□□ -1.23
TPM3-216ENST00000473036 ACYP1P07311 99 aa7.34□□□□□ -1.23
TPM3-216ENST00000473036 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
TPM3-216ENST00000473036 A0A1W2PNM2 257 aa7.32□□□□□ -1.24
TPM3-216ENST00000473036 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
TPM3-216ENST00000473036 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
TPM3-216ENST00000473036 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
TPM3-216ENST00000473036 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
TPM3-216ENST00000473036 A0A087WSZ3 146 aa7.28□□□□□ -1.24
TPM3-216ENST00000473036 FAM240AA0A1B0GVK7 77 aa7.28□□□□□ -1.24
TPM3-216ENST00000473036 NREPQ16612 68 aa7.27□□□□□ -1.25
TPM3-216ENST00000473036 UBL5Q9BZL1 73 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms