RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 WIPF1O43516 503 aa10.8□□□□□ -0.68
LAMP1-203ENST00000472564 C9orf92A6NGG3 77 aa10.78□□□□□ -0.68
LAMP1-203ENST00000472564 CELSR3Q9NYQ7 3312 aa10.78□□□□□ -0.68
LAMP1-203ENST00000472564 Q1T7F1 81 aa10.78□□□□□ -0.68
LAMP1-203ENST00000472564 KTN1-AS1Q86SY8 53 aa10.78□□□□□ -0.68
LAMP1-203ENST00000472564 PRR26Q8N8Z3 221 aa10.78□□□□□ -0.68
LAMP1-203ENST00000472564 CD164Q04900 197 aa10.77□□□□□ -0.68
LAMP1-203ENST00000472564 SPRR1AP35321 89 aa10.76□□□□□ -0.69
LAMP1-203ENST00000472564 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
LAMP1-203ENST00000472564 CDC42SE1Q9NRR8 79 aa10.74□□□□□ -0.69
LAMP1-203ENST00000472564 IGSF10Q6WRI0 2623 aa10.72□□□□□ -0.69
LAMP1-203ENST00000472564 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
LAMP1-203ENST00000472564 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
LAMP1-203ENST00000472564 SPINT4Q6UDR6 99 aa10.71□□□□□ -0.7
LAMP1-203ENST00000472564 KALRNO60229 2985 aa10.7□□□□□ -0.7
LAMP1-203ENST00000472564 Q5XG85 94 aa10.7□□□□□ -0.7
LAMP1-203ENST00000472564 Q8N1X5 172 aa10.7□□□□□ -0.7
LAMP1-203ENST00000472564 LAMA1P25391 3075 aa10.69□□□□□ -0.7
LAMP1-203ENST00000472564 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
LAMP1-203ENST00000472564 LCA10Q71F78 164 aa10.67□□□□□ -0.7
LAMP1-203ENST00000472564 VCANP13611 3396 aa10.67□□□□□ -0.7
LAMP1-203ENST00000472564 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.7
LAMP1-203ENST00000472564 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.7
LAMP1-203ENST00000472564 TNP2Q05952 138 aa10.64□□□□□ -0.71
LAMP1-203ENST00000472564 FLNCQ14315 2725 aa10.61□□□□□ -0.71
LAMP1-203ENST00000472564 TACC2O95359 2948 aa10.61□□□□□ -0.71
LAMP1-203ENST00000472564 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
LAMP1-203ENST00000472564 ATMQ13315 3056 aa10.6□□□□□ -0.71
LAMP1-203ENST00000472564 NSD1Q96L73 2696 aaPredicted RBP10.6□□□□□ -0.71
LAMP1-203ENST00000472564 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
LAMP1-203ENST00000472564 ADGRG4Q8IZF6 3080 aa10.6□□□□□ -0.71
LAMP1-203ENST00000472564 HRES1P13985 223 aa10.6□□□□□ -0.71
LAMP1-203ENST00000472564 DMXL2Q8TDJ6 3036 aa10.59□□□□□ -0.71
LAMP1-203ENST00000472564 CRIPTQ9P021 101 aa10.58□□□□□ -0.72
LAMP1-203ENST00000472564 ITPR1Q14643 2758 aa10.58□□□□□ -0.72
LAMP1-203ENST00000472564 SPRR1BP22528 89 aa10.58□□□□□ -0.72
LAMP1-203ENST00000472564 LINC00472Q9H8W2 130 aa10.58□□□□□ -0.72
LAMP1-203ENST00000472564 Q75L30 129 aa10.56□□□□□ -0.72
LAMP1-203ENST00000472564 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
LAMP1-203ENST00000472564 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
LAMP1-203ENST00000472564 OXTP01178 125 aa10.53□□□□□ -0.72
LAMP1-203ENST00000472564 BOD1L1Q8NFC6 3051 aa10.52□□□□□ -0.72
LAMP1-203ENST00000472564 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.73
LAMP1-203ENST00000472564 PLAC8Q9NZF1 115 aa10.52□□□□□ -0.73
LAMP1-203ENST00000472564 LINC01558Q9Y6Z2 57 aa10.52□□□□□ -0.73
LAMP1-203ENST00000472564 FRYLO94915 3013 aa10.51□□□□□ -0.73
LAMP1-203ENST00000472564 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
LAMP1-203ENST00000472564 FLG2Q5D862 2391 aaPredicted RBP10.5□□□□□ -0.73
LAMP1-203ENST00000472564 DNAH14Q0VDD8 3507 aa10.5□□□□□ -0.73
LAMP1-203ENST00000472564 A0A0D9SG42 100 aa10.49□□□□□ -0.73
LAMP1-203ENST00000472564 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
LAMP1-203ENST00000472564 J3QL48 77 aa10.47□□□□□ -0.73
LAMP1-203ENST00000472564 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
LAMP1-203ENST00000472564 Q5VV11 94 aa10.45□□□□□ -0.74
LAMP1-203ENST00000472564 BAHCC1Q9P281 2608 aa10.44□□□□□ -0.74
LAMP1-203ENST00000472564 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
LAMP1-203ENST00000472564 KRTAP4-16G5E9R7 235 aaPredicted RBP10.41□□□□□ -0.74
LAMP1-203ENST00000472564 A0A1B0GU33 70 aa10.41□□□□□ -0.74
LAMP1-203ENST00000472564 Q5W150 140 aa10.39□□□□□ -0.75
LAMP1-203ENST00000472564 LINC01554Q52M75 96 aa10.38□□□□□ -0.75
LAMP1-203ENST00000472564 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
LAMP1-203ENST00000472564 LRBAP50851 2863 aa10.38□□□□□ -0.75
LAMP1-203ENST00000472564 ZCCHC13Q8WW36 166 aaKnown RBP10.36□□□□□ -0.75
LAMP1-203ENST00000472564 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
LAMP1-203ENST00000472564 SPINK7P58062 85 aa10.33□□□□□ -0.76
LAMP1-203ENST00000472564 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
LAMP1-203ENST00000472564 CFAP47Q6ZTR5 3102 aa10.31□□□□□ -0.76
LAMP1-203ENST00000472564 ZZEF1O43149 2961 aa10.3□□□□□ -0.76
LAMP1-203ENST00000472564 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
LAMP1-203ENST00000472564 REV3LO60673 3130 aa10.28□□□□□ -0.76
LAMP1-203ENST00000472564 PRAC1Q96KF2 57 aa10.28□□□□□ -0.76
LAMP1-203ENST00000472564 COL6A3P12111 3177 aa10.28□□□□□ -0.76
LAMP1-203ENST00000472564 PANO1I0J062 215 aa10.25□□□□□ -0.77
LAMP1-203ENST00000472564 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
LAMP1-203ENST00000472564 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
LAMP1-203ENST00000472564 Q6ZSA8 131 aa10.23□□□□□ -0.77
LAMP1-203ENST00000472564 NIPBLQ6KC79 2804 aaeCLIP10.23□□□□□ -0.77
LAMP1-203ENST00000472564 HIVEP1P15822 2718 aa10.22□□□□□ -0.77
LAMP1-203ENST00000472564 APCP25054 2843 aa10.22□□□□□ -0.77
LAMP1-203ENST00000472564 Q6ZR54 194 aa10.21□□□□□ -0.78
LAMP1-203ENST00000472564 ZANQ9Y493 2812 aa10.19□□□□□ -0.78
LAMP1-203ENST00000472564 DMAC1Q96GE9 116 aa10.18□□□□□ -0.78
LAMP1-203ENST00000472564 SPEGQ15772 3267 aa10.16□□□□□ -0.78
LAMP1-203ENST00000472564 KRTAP10-2P60368 255 aa10.15□□□□□ -0.79
LAMP1-203ENST00000472564 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
LAMP1-203ENST00000472564 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
LAMP1-203ENST00000472564 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
LAMP1-203ENST00000472564 KMT2BQ9UMN6 2715 aaPredicted RBP10.11□□□□□ -0.79
LAMP1-203ENST00000472564 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
LAMP1-203ENST00000472564 KRTAP7-1Q8IUC3 87 aa10.09□□□□□ -0.79
LAMP1-203ENST00000472564 A0A087X002 238 aa10.08□□□□□ -0.8
LAMP1-203ENST00000472564 NOTCH2NLQ7Z3S9 236 aa10.08□□□□□ -0.8
LAMP1-203ENST00000472564 DCHS2Q6V1P9 2916 aa10.07□□□□□ -0.8
LAMP1-203ENST00000472564 S4R3F8 94 aa10.06□□□□□ -0.8
LAMP1-203ENST00000472564 CAMK2N1Q7Z7J9 78 aa10.05□□□□□ -0.8
LAMP1-203ENST00000472564 LCE6AA0A183 80 aa10.03□□□□□ -0.8
LAMP1-203ENST00000472564 LUZP6Q538Z0 58 aa10.02□□□□□ -0.81
LAMP1-203ENST00000472564 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
LAMP1-203ENST00000472564 RPL37P61927 97 aaKnown RBP9.95□□□□□ -0.82
LAMP1-203ENST00000472564 NF1P21359 2839 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms