RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 DEFB103AP81534 67 aa1.5□□□□□ -2.17
TTC3-214ENST00000472398 MAST4O15021 2626 aa1.5□□□□□ -2.17
TTC3-214ENST00000472398 DEFB106AQ8N104 65 aa1.49□□□□□ -2.17
TTC3-214ENST00000472398 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
TTC3-214ENST00000472398 MKI67P46013 3256 aaKnown RBP1.49□□□□□ -2.17
TTC3-214ENST00000472398 PIEZO1Q92508 2521 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 A0A1B0GVY2 172 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 KRTAP10-1P60331 282 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 COX6B2Q6YFQ2 88 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 TNRC18O15417 2968 aaPredicted RBP1.48□□□□□ -2.17
TTC3-214ENST00000472398 KRTAP10-3P60369 221 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 WT1-ASQ06250 92 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 SPINK13Q1W4C9 94 aa1.48□□□□□ -2.17
TTC3-214ENST00000472398 MMP24-AS1A0A0U1RRL7 71 aa1.47□□□□□ -2.17
TTC3-214ENST00000472398 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
TTC3-214ENST00000472398 SETXQ7Z333 2677 aaKnown RBP1.47□□□□□ -2.17
TTC3-214ENST00000472398 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
TTC3-214ENST00000472398 UNQ6190/PRO20217Q6UXQ8 127 aa1.46□□□□□ -2.18
TTC3-214ENST00000472398 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
TTC3-214ENST00000472398 ROS1P08922 2347 aa1.46□□□□□ -2.18
TTC3-214ENST00000472398 SPTBN1Q01082 2364 aaKnown RBP1.46□□□□□ -2.18
TTC3-214ENST00000472398 DNAH12Q6ZR08 3092 aa1.46□□□□□ -2.18
TTC3-214ENST00000472398 PCNTO95613 3336 aa1.46□□□□□ -2.18
TTC3-214ENST00000472398 HTTP42858 3142 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 KRTAP10-5P60370 271 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 TOMM7Q9P0U1 55 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 NOTCH3Q9UM47 2321 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 RPL39P5Q59GN2 51 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 CRYBG3Q68DQ2 2970 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 APLNQ9ULZ1 77 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 USP9XQ93008 2570 aaPredicted RBP1.45□□□□□ -2.18
TTC3-214ENST00000472398 NEBP20929 6669 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 CEP290O15078 2479 aa1.45□□□□□ -2.18
TTC3-214ENST00000472398 C5orf42Q9H799 3197 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 SPRR5A0A1B0GTR4 108 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 USMG5Q96IX5 58 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
TTC3-214ENST00000472398 CFAP54Q96N23 3096 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 DEFB108AA8MXU0 73 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 SPRR1AP35321 89 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 GVINP1Q7Z2Y8 2422 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 ZFHX4Q86UP3 3567 aa1.44□□□□□ -2.18
TTC3-214ENST00000472398 KRTAP13-3Q3SY46 172 aa1.43□□□□□ -2.18
TTC3-214ENST00000472398 NAV2Q8IVL1 2488 aa1.43□□□□□ -2.18
TTC3-214ENST00000472398 CLPSL2Q6UWE3 100 aa1.43□□□□□ -2.18
TTC3-214ENST00000472398 CENPFP49454 3210 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 CHD9Q3L8U1 2897 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 PRRC2CQ9Y520 2896 aaKnown RBP1.42□□□□□ -2.18
TTC3-214ENST00000472398 CSPG4Q6UVK1 2322 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 ABCA12Q86UK0 2595 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 CELSR1Q9NYQ6 3014 aa1.42□□□□□ -2.18
TTC3-214ENST00000472398 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 SPTBN2O15020 2390 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 K7EIL1 84 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 TMEM167AQ8TBQ9 72 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 BDP1A6H8Y1 2624 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 ZNF292O60281 2723 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 AKAP13Q12802 2813 aa1.41□□□□□ -2.18
TTC3-214ENST00000472398 SPENQ96T58 3664 aaKnown RBP1.4□□□□□ -2.18
TTC3-214ENST00000472398 PTPN13Q12923 2485 aa1.4□□□□□ -2.18
TTC3-214ENST00000472398 FASNP49327 2511 aaKnown RBP1.4□□□□□ -2.19
TTC3-214ENST00000472398 CHD6Q8TD26 2715 aa1.4□□□□□ -2.19
TTC3-214ENST00000472398 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
TTC3-214ENST00000472398 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
TTC3-214ENST00000472398 TEP1Q99973 2627 aaKnown RBP1.4□□□□□ -2.19
TTC3-214ENST00000472398 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.19
TTC3-214ENST00000472398 EPG5Q9HCE0 2579 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 PRLHP81277 87 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 KLK9Q2XQG4 91 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 BRD3OSQ6XYD6 125 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 FLNBO75369 2602 aaKnown RBP1.39□□□□□ -2.19
TTC3-214ENST00000472398 MUC6Q6W4X9 2439 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 VWFP04275 2813 aa1.39□□□□□ -2.19
TTC3-214ENST00000472398 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
TTC3-214ENST00000472398 DOPEY1Q5JWR5 2465 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 CELSR3Q9NYQ7 3312 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 SPEGQ15772 3267 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 BRCA2P51587 3418 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 DEFB131AP59861 70 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 NOTCH2Q04721 2471 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 TRIOO75962 3097 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 MYO18BQ8IUG5 2567 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 K7EIM0 57 aa1.38□□□□□ -2.19
TTC3-214ENST00000472398 LAMA2P24043 3122 aaKnown RBP1.38□□□□□ -2.19
TTC3-214ENST00000472398 ANKRD11Q6UB99 2663 aaPredicted RBP1.37□□□□□ -2.19
TTC3-214ENST00000472398 ACACAQ13085 2346 aa1.37□□□□□ -2.19
TTC3-214ENST00000472398 MUC3AQ02505 3323 aa1.37□□□□□ -2.19
TTC3-214ENST00000472398 PRUNE2Q8WUY3 3088 aa1.37□□□□□ -2.19
TTC3-214ENST00000472398 PRO0255Q9UI72 69 aa1.37□□□□□ -2.19
TTC3-214ENST00000472398 SPTA1P02549 2419 aa1.36□□□□□ -2.19
TTC3-214ENST00000472398 STATHP02808 62 aa1.36□□□□□ -2.19
TTC3-214ENST00000472398 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
TTC3-214ENST00000472398 COL6A5A8TX70 2615 aa1.36□□□□□ -2.19
TTC3-214ENST00000472398 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
TTC3-214ENST00000472398 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
TTC3-214ENST00000472398 SPINK1P00995 79 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms