RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 NEDD8Q15843 81 aa0.88□□□□□ -2.27
SGCE-210ENST00000472326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.88□□□□□ -2.27
SGCE-210ENST00000472326 ATOH7Q8N100 152 aa0.88□□□□□ -2.27
SGCE-210ENST00000472326 C5orf17Q8NAS9 161 aa0.88□□□□□ -2.27
SGCE-210ENST00000472326 DMAC1Q96GE9 116 aa0.88□□□□□ -2.27
SGCE-210ENST00000472326 MRPL35Q9NZE8 188 aaKnown RBP0.88□□□□□ -2.27
SGCE-210ENST00000472326 TRBV20-1A0A075B6N2 111 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
SGCE-210ENST00000472326 C9orf92A6NGG3 77 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 J3QLW9 94 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 M0R2P5 195 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 NCR3O14931 201 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 ADCYAP1P18509 176 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 CATR1Q13166 79 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 ATP11AUNQ6ZP68 121 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 PFDN5Q99471 154 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 VPS25Q9BRG1 176 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 SAR1AQ9NR31 198 aa0.87□□□□□ -2.27
SGCE-210ENST00000472326 A0A1W2PPM0 123 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 FAM24AA6NFZ4 105 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 SNRPGP15A8MWD9 76 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 COX4I1P13073 169 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 PKIAP61925 76 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 TSC22D3Q99576 134 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 PDCD10Q9BUL8 212 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 COMMD3Q9UBI1 195 aa0.86□□□□□ -2.27
SGCE-210ENST00000472326 FXYD6-FXYD2A0A087WZ82 144 aa0.85□□□□□ -2.27
SGCE-210ENST00000472326 M0R129 80 aa0.85□□□□□ -2.27
SGCE-210ENST00000472326 NCS1P62166 190 aa0.85□□□□□ -2.27
SGCE-210ENST00000472326 OCIAD2Q56VL3 154 aa0.85□□□□□ -2.27
SGCE-210ENST00000472326 GVQW2A0A096LPI5 108 aaPredicted RBP0.84□□□□□ -2.27
SGCE-210ENST00000472326 TRBV10-1A0A0K0K1A3 114 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 HIGD1CA8MV81 97 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 CCDC179H3BU77 68 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 J3QR89 54 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 FXYD1O00168 92 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 SPINK1P00995 79 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 IGLC6P0CF74 106 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 LINC00694P0DN24 101 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 CFAP126Q5VTH2 177 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 LIMD2Q9BT23 127 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 NPVFQ9HCQ7 196 aa0.84□□□□□ -2.27
SGCE-210ENST00000472326 RBAKDNA6NC62 111 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 FXYD4P59646 89 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 RPL37P61927 97 aaKnown RBP0.83□□□□□ -2.28
SGCE-210ENST00000472326 GNG11P61952 73 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 UBE2D2P62837 147 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 Q6ZQY7 126 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 TMEM191AQ9H0A3 160 aa0.83□□□□□ -2.28
SGCE-210ENST00000472326 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 BCE1O60756 84 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 CFDP00746 253 aaPredicted RBP0.82□□□□□ -2.28
SGCE-210ENST00000472326 RBM3P98179 157 aaKnown RBP0.82□□□□□ -2.28
SGCE-210ENST00000472326 CSAG1Q6PB30 78 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 ZNF818PQ6ZRF7 136 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 ARL17AQ8IVW1 177 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 ACBD7Q8N6N7 88 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 ATG5Q9H1Y0 275 aa0.82□□□□□ -2.28
SGCE-210ENST00000472326 LSM2Q9Y333 95 aaKnown RBP0.82□□□□□ -2.28
SGCE-210ENST00000472326 TRBV7-3A0A075B6L6 115 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 TRBV25-1A0A075B6N4 114 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 TRAV23DV6A0A075B6W5 121 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 TEX49A0A1B0GTD5 131 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 EFCAB10A6NFE3 127 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 CEBPZOSA8MTT3 80 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 GNGT2O14610 69 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 NMBP08949 121 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 S100A10P60903 97 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 FAM74A4Q5TZK3 123 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 Q5VV11 94 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 AQP10Q96PS8 301 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 TRGV9Q99603 122 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 SMIM3Q9BZL3 60 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 AGPAT4-IT1Q9H0P7 198 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 ERG28Q9UKR5 140 aa0.81□□□□□ -2.28
SGCE-210ENST00000472326 TRBV30A0A0K0K1B3 111 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 M0R3E3 92 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 HIST1H1DP16402 221 aaKnown RBP0.8□□□□□ -2.28
SGCE-210ENST00000472326 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
SGCE-210ENST00000472326 RPS25P62851 125 aaKnown RBP0.8□□□□□ -2.28
SGCE-210ENST00000472326 CCDC58Q4VC31 144 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 CLLU1Q5K131 121 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 LINC01545Q5VT33 79 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 SNX29P2Q8IUI4 249 aa0.8□□□□□ -2.28
SGCE-210ENST00000472326 IL5P05113 134 aa0.79□□□□□ -2.28
SGCE-210ENST00000472326 GNG2P59768 71 aa0.79□□□□□ -2.28
SGCE-210ENST00000472326 C12orf73Q69YU5 71 aa0.79□□□□□ -2.28
SGCE-210ENST00000472326 Q6AWC8 147 aa0.79□□□□□ -2.28
SGCE-210ENST00000472326 NAA60Q9H7X0 242 aa0.79□□□□□ -2.28
SGCE-210ENST00000472326 TRAV21A0A0B4J279 112 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 A0A0G2JND7 137 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 TRBV6-1A0A0K0K1D8 114 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 FAM236AA0A1B0GUQ0 79 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 FAM236BA0A1B0GV22 79 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 H3BQ15 152 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 MT1BP07438 61 aa0.78□□□□□ -2.28
SGCE-210ENST00000472326 NMSQ5H8A3 153 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms