RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 A0A1B0GX51 115 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 F8VRH5 84 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 K7EMI3 77 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 PSMB2P49721 201 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 RNASE13Q5GAN3 156 aaKnown RBP3.2□□□□□ -1.9
HDAC3-206ENST00000471968 ANKRD29Q8N6D5 301 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 Q8N8P6 123 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 NRACQ8N912 160 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 CDC42SE2Q9NRR3 84 aa3.2□□□□□ -1.9
HDAC3-206ENST00000471968 LOC107984156A0A0G2JMH3 177 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 TRBV7-7A0A0K0K1E9 115 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 LINC01549A6NIU2 74 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 J3KT08 172 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 PRSS2P07478 247 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 MEIG1Q5JSS6 88 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 ARL17AQ8IVW1 177 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 TIMM21Q9BVV7 248 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 HIGD2AQ9BW72 106 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 TTTY13Q9BZ97 58 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
HDAC3-206ENST00000471968 CSDC2Q9Y534 153 aaKnown RBP3.19□□□□□ -1.9
HDAC3-206ENST00000471968 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
HDAC3-206ENST00000471968 TCL1BO95988 128 aa3.18□□□□□ -1.9
HDAC3-206ENST00000471968 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
HDAC3-206ENST00000471968 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
HDAC3-206ENST00000471968 MOBPQ13875 183 aa3.18□□□□□ -1.9
HDAC3-206ENST00000471968 TMEM141Q96I45 108 aa3.18□□□□□ -1.9
HDAC3-206ENST00000471968 IGLV9-49A0A0B4J1Y8 123 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 H3BT86 120 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 HERVK_113P61574 105 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
HDAC3-206ENST00000471968 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 TMEM170BQ5T4T1 132 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 C2orf82Q6UX34 121 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 C2orf66Q6UXQ4 117 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 SCGB1D4Q6XE38 83 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 OR13C6PQ8NH95 151 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 TOMM7Q9P0U1 55 aa3.17□□□□□ -1.9
HDAC3-206ENST00000471968 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 UQCRQO14949 82 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 GHRHP01286 108 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 ACYP1P07311 99 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 MRPS36P82909 103 aaKnown RBP3.16□□□□□ -1.9
HDAC3-206ENST00000471968 C6orf99Q4VX62 202 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 TOMM6Q96B49 74 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 SCGB3A1Q96QR1 104 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 PRO1854Q9UHT4 67 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 PYGO1Q9Y3Y4 419 aa3.16□□□□□ -1.9
HDAC3-206ENST00000471968 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
HDAC3-206ENST00000471968 IGLV4-3A0A075B6K6 122 aa3.15□□□□□ -1.91
HDAC3-206ENST00000471968 C9JAW5 83 aa3.15□□□□□ -1.91
HDAC3-206ENST00000471968 HERVK_113P63121 156 aa3.15□□□□□ -1.91
HDAC3-206ENST00000471968 C6orf226Q5I0X4 101 aa3.15□□□□□ -1.91
HDAC3-206ENST00000471968 CXCL5P42830 114 aa3.14□□□□□ -1.91
HDAC3-206ENST00000471968 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
HDAC3-206ENST00000471968 C9orf153Q5TBE3 101 aa3.14□□□□□ -1.91
HDAC3-206ENST00000471968 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
HDAC3-206ENST00000471968 TIMM17AQ99595 171 aa3.14□□□□□ -1.91
HDAC3-206ENST00000471968 C11orf86A6NJI1 115 aa3.13□□□□□ -1.91
HDAC3-206ENST00000471968 TMEM258P61165 79 aa3.13□□□□□ -1.91
HDAC3-206ENST00000471968 KIAA0087Q14695 138 aa3.13□□□□□ -1.91
HDAC3-206ENST00000471968 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
HDAC3-206ENST00000471968 ATP11AUNQ6ZP68 121 aa3.13□□□□□ -1.91
HDAC3-206ENST00000471968 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
HDAC3-206ENST00000471968 IGHV3OR16-9A0A0B4J2B5 98 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 ATOX1O00244 68 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 COX6CP09669 75 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 COX7CP15954 63 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 PMVKQ15126 192 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 LINC00643Q86TS7 51 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
HDAC3-206ENST00000471968 TEX49A0A1B0GTD5 131 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 J3QQQ9 107 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 Q1RN00 199 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 Q8IZM0 81 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
HDAC3-206ENST00000471968 TINCRA0A1B0GVN0 87 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 TMEM223A0PJW6 202 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 A4D1N5 150 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 IGIPA6NJ69 53 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 M0R378 163 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 LST1O00453 97 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 LEPROTO15243 131 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 TRIAP1O43715 76 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 HIST1H4AP62805 103 aaKnown RBP3.1□□□□□ -1.91
HDAC3-206ENST00000471968 GAGE2AQ6NT46 116 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 COX7B2Q8TF08 81 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 AMELXQ99217 191 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 LIMD2Q9BT23 127 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 CDKN2A-AS1Q9UH64 79 aa3.1□□□□□ -1.91
HDAC3-206ENST00000471968 TRACP01848 142 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms