RNA–Protein interactions for RNA: ENST00000469966.1

CCDC66-212, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-212ENST00000469966 LINC00158P58513 81 aa-0.27□□□□□ -2.45
CCDC66-212ENST00000469966 MXRA5Q9NR99 2828 aa-0.27□□□□□ -2.45
CCDC66-212ENST00000469966 SVEP1Q4LDE5 3571 aa-0.27□□□□□ -2.45
CCDC66-212ENST00000469966 COL6A5A8TX70 2615 aa-0.27□□□□□ -2.45
CCDC66-212ENST00000469966 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
CCDC66-212ENST00000469966 NWD1Q149M9 1564 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 TGP01266 2768 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 DSPP15924 2871 aaKnown RBP-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 BIRC6Q9NR09 4857 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 NDUFA4O00483 81 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 SPRR2AP35326 72 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 DEFA5Q01523 94 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 KRTAP6-2Q3LI66 62 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 FAT3Q8TDW7 4589 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 FLGP20930 4061 aaPredicted RBP-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 DNAH6Q9C0G6 4158 aa-0.28□□□□□ -2.45
CCDC66-212ENST00000469966 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 C4AP0C0L4 1744 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 C4BP0C0L5 1744 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 DNHD1Q96M86 4753 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 SPRR2EP22531 72 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 DNAH11Q96DT5 4516 aa-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 SONP18583 2426 aaKnown RBP-0.29□□□□□ -2.46
CCDC66-212ENST00000469966 NBASA2RRP1 2371 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 TIAM2Q8IVF5 1701 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 DNAH2Q9P225 4427 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 EPG5Q9HCE0 2579 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 AKAP13Q12802 2813 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 DIP2BQ9P265 1576 aa-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
CCDC66-212ENST00000469966 ANK3Q12955 4377 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-212ENST00000469966 MAGI3Q5TCQ9 1506 aa-0.31□□□□□ -2.46
CCDC66-212ENST00000469966 DCAF1Q9Y4B6 1507 aa-0.31□□□□□ -2.46
CCDC66-212ENST00000469966 HTTP42858 3142 aa-0.31□□□□□ -2.46
CCDC66-212ENST00000469966 NIPBLQ6KC79 2804 aaeCLIP-0.32□□□□□ -2.46
CCDC66-212ENST00000469966 ARFGEF2Q9Y6D5 1785 aa-0.32□□□□□ -2.46
CCDC66-212ENST00000469966 PKD1P98161 4303 aa-0.32□□□□□ -2.46
CCDC66-212ENST00000469966 KRTAP20-1Q3LI63 56 aa-0.32□□□□□ -2.46
CCDC66-212ENST00000469966 RIF1Q5UIP0 2472 aaKnown RBP-0.32□□□□□ -2.46
CCDC66-212ENST00000469966 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 FASNP49327 2511 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 ARHGAP35Q9NRY4 1499 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 NESP48681 1621 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 PTPN23Q9H3S7 1636 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 H3BNG1 76 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 TACC2O95359 2948 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 COL12A1Q99715 3063 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 ADAMTS12P58397 1594 aa-0.33□□□□□ -2.46
CCDC66-212ENST00000469966 PLECQ15149 4684 aaKnown RBP-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 ITPR3Q14573 2671 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 NBPF19A0A087WUL8 3843 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 LCE6AA0A183 80 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 C18orf32Q8TCD1 76 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 WDR87Q6ZQQ6 2873 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 SPG11Q96JI7 2443 aa-0.34□□□□□ -2.46
CCDC66-212ENST00000469966 PRRC2CQ9Y520 2896 aaKnown RBP-0.35□□□□□ -2.46
CCDC66-212ENST00000469966 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.46
CCDC66-212ENST00000469966 SPRR2FQ96RM1 72 aa-0.35□□□□□ -2.47
CCDC66-212ENST00000469966 ABCC1P33527 1531 aa-0.35□□□□□ -2.47
CCDC66-212ENST00000469966 USP9XQ93008 2570 aaPredicted RBP-0.36□□□□□ -2.47
CCDC66-212ENST00000469966 ANKRD50Q9ULJ7 1429 aa-0.36□□□□□ -2.47
CCDC66-212ENST00000469966 DYNC1H1Q14204 4646 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-212ENST00000469966 CCDC88BA6NC98 1476 aa-0.36□□□□□ -2.47
CCDC66-212ENST00000469966 TNRC18O15417 2968 aaPredicted RBP-0.36□□□□□ -2.47
CCDC66-212ENST00000469966 MYO18BQ8IUG5 2567 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 KDM5DQ9BY66 1539 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 PKHD1L1Q86WI1 4243 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 MT1AP04731 61 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 AKAP9Q99996 3911 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 LAMA1P25391 3075 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 SACSQ9NZJ4 4579 aa-0.37□□□□□ -2.47
CCDC66-212ENST00000469966 ACACAQ13085 2346 aa-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 CUBNO60494 3623 aa-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 C9orf92A6NGG3 77 aa-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 H0YAA0 97 aa-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 HMGA1P17096 107 aaKnown RBP-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 DMXL1Q9Y485 3027 aa-0.38□□□□□ -2.47
CCDC66-212ENST00000469966 ITPR2Q14571 2701 aa-0.39□□□□□ -2.47
CCDC66-212ENST00000469966 KALRNO60229 2985 aa-0.39□□□□□ -2.47
CCDC66-212ENST00000469966 ANKRD11Q6UB99 2663 aaPredicted RBP-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 DEFB110Q30KQ9 67 aa-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 S4R3F8 94 aa-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 DNAH1Q9P2D7 4330 aa-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 CELSR3Q9NYQ7 3312 aa-0.4□□□□□ -2.47
CCDC66-212ENST00000469966 LAMA3Q16787 3333 aa-0.41□□□□□ -2.47
CCDC66-212ENST00000469966 ZZEF1O43149 2961 aa-0.41□□□□□ -2.47
CCDC66-212ENST00000469966 ITPR1Q14643 2758 aa-0.41□□□□□ -2.47
CCDC66-212ENST00000469966 SCN11AQ9UI33 1791 aa-0.41□□□□□ -2.47
CCDC66-212ENST00000469966 H3BVH4 76 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 DEFB1P60022 68 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 LYSTQ99698 3801 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 DNAH8Q96JB1 4490 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 MTORP42345 2549 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 RELNP78509 3460 aa-0.41□□□□□ -2.48
CCDC66-212ENST00000469966 CCDC168Q8NDH2 2452 aa-0.42□□□□□ -2.48
CCDC66-212ENST00000469966 A0A0C4DFX4 3053 aa-0.42□□□□□ -2.48
CCDC66-212ENST00000469966 MT1HP80294 61 aa-0.42□□□□□ -2.48
CCDC66-212ENST00000469966 PKD1L2Q7Z442 2459 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms