RNA–Protein interactions for RNA: ENST00000469966.1

CCDC66-212, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-212ENST00000469966 AEBP2Q6ZN18 517 aaPredicted RBP24.41■■□□□ 1.5
CCDC66-212ENST00000469966 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
CCDC66-212ENST00000469966 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
CCDC66-212ENST00000469966 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
CCDC66-212ENST00000469966 FOXD1Q16676 465 aa19.37■□□□□ 0.69
CCDC66-212ENST00000469966 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
CCDC66-212ENST00000469966 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
CCDC66-212ENST00000469966 ADRA2BP18089 450 aa18.22■□□□□ 0.51
CCDC66-212ENST00000469966 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
CCDC66-212ENST00000469966 MSH5O43196 834 aa18.08■□□□□ 0.48
CCDC66-212ENST00000469966 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
CCDC66-212ENST00000469966 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
CCDC66-212ENST00000469966 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
CCDC66-212ENST00000469966 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
CCDC66-212ENST00000469966 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
CCDC66-212ENST00000469966 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
CCDC66-212ENST00000469966 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
CCDC66-212ENST00000469966 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
CCDC66-212ENST00000469966 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
CCDC66-212ENST00000469966 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
CCDC66-212ENST00000469966 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
CCDC66-212ENST00000469966 KCNA4P22459 653 aa15.6■□□□□ 0.09
CCDC66-212ENST00000469966 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
CCDC66-212ENST00000469966 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
CCDC66-212ENST00000469966 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
CCDC66-212ENST00000469966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC66-212ENST00000469966 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
CCDC66-212ENST00000469966 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
CCDC66-212ENST00000469966 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
CCDC66-212ENST00000469966 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
CCDC66-212ENST00000469966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
CCDC66-212ENST00000469966 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
CCDC66-212ENST00000469966 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
CCDC66-212ENST00000469966 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CCDC66-212ENST00000469966 APLP2Q06481 763 aa14.63□□□□□ -0.07
CCDC66-212ENST00000469966 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
CCDC66-212ENST00000469966 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
CCDC66-212ENST00000469966 DSG3P32926 999 aa14.52□□□□□ -0.09
CCDC66-212ENST00000469966 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CCDC66-212ENST00000469966 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
CCDC66-212ENST00000469966 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
CCDC66-212ENST00000469966 ZBTB22O15209 634 aa14.33□□□□□ -0.12
CCDC66-212ENST00000469966 ABCB7O75027 752 aa14.29□□□□□ -0.12
CCDC66-212ENST00000469966 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
CCDC66-212ENST00000469966 POLA2Q14181 598 aa14.15□□□□□ -0.14
CCDC66-212ENST00000469966 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
CCDC66-212ENST00000469966 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
CCDC66-212ENST00000469966 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
CCDC66-212ENST00000469966 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
CCDC66-212ENST00000469966 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
CCDC66-212ENST00000469966 FBLN2P98095 1184 aa13.64□□□□□ -0.23
CCDC66-212ENST00000469966 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
CCDC66-212ENST00000469966 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CCDC66-212ENST00000469966 POTEHQ6S545 545 aa13.56□□□□□ -0.24
CCDC66-212ENST00000469966 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
CCDC66-212ENST00000469966 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
CCDC66-212ENST00000469966 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
CCDC66-212ENST00000469966 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
CCDC66-212ENST00000469966 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
CCDC66-212ENST00000469966 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
CCDC66-212ENST00000469966 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
CCDC66-212ENST00000469966 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
CCDC66-212ENST00000469966 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
CCDC66-212ENST00000469966 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
CCDC66-212ENST00000469966 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
CCDC66-212ENST00000469966 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC66-212ENST00000469966 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC66-212ENST00000469966 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
CCDC66-212ENST00000469966 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
CCDC66-212ENST00000469966 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
CCDC66-212ENST00000469966 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
CCDC66-212ENST00000469966 HAX1O00165 279 aa12.88□□□□□ -0.35
CCDC66-212ENST00000469966 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
CCDC66-212ENST00000469966 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
CCDC66-212ENST00000469966 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
CCDC66-212ENST00000469966 PROM2Q8N271 834 aa12.77□□□□□ -0.37
CCDC66-212ENST00000469966 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
CCDC66-212ENST00000469966 EVX2Q03828 476 aa12.72□□□□□ -0.37
CCDC66-212ENST00000469966 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
CCDC66-212ENST00000469966 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
CCDC66-212ENST00000469966 FKBP8Q14318 412 aa12.58□□□□□ -0.4
CCDC66-212ENST00000469966 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
CCDC66-212ENST00000469966 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
CCDC66-212ENST00000469966 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC66-212ENST00000469966 GABBR2O75899 941 aa12.47□□□□□ -0.41
CCDC66-212ENST00000469966 CLCN6P51797 869 aa12.45□□□□□ -0.42
CCDC66-212ENST00000469966 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
CCDC66-212ENST00000469966 MIER1Q8N108 512 aa12.42□□□□□ -0.42
CCDC66-212ENST00000469966 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
CCDC66-212ENST00000469966 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
CCDC66-212ENST00000469966 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
CCDC66-212ENST00000469966 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
CCDC66-212ENST00000469966 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
CCDC66-212ENST00000469966 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-212ENST00000469966 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
CCDC66-212ENST00000469966 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
CCDC66-212ENST00000469966 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
CCDC66-212ENST00000469966 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
CCDC66-212ENST00000469966 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
CCDC66-212ENST00000469966 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms