RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 H7C2G1 150 aa5.07□□□□□ -1.6
SHROOM3-203ENST00000469923 DHRS4-AS1Q9P1J3 65 aa5.07□□□□□ -1.6
SHROOM3-203ENST00000469923 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 TAX1BP3O14907 124 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 CFC1P0CG37 223 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 SPRR1BP22528 89 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 RAB37Q96AX2 223 aa5.06□□□□□ -1.6
SHROOM3-203ENST00000469923 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 A0A0U1RQV1 116 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 C9orf92A6NGG3 77 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 ASB16-AS1Q495Z4 193 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 XP32Q5T750 250 aa5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 FP248Q71RG6 208 aaPredicted RBP5.05□□□□□ -1.6
SHROOM3-203ENST00000469923 TRBV7-6A0A0J9YX20 115 aa5.04□□□□□ -1.6
SHROOM3-203ENST00000469923 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
SHROOM3-203ENST00000469923 SLC25A20O43772 301 aa5.03□□□□□ -1.6
SHROOM3-203ENST00000469923 NAA38Q9BRA0 125 aaKnown RBP5.03□□□□□ -1.6
SHROOM3-203ENST00000469923 PRO1854Q9UHT4 67 aa5.03□□□□□ -1.6
SHROOM3-203ENST00000469923 TEX49A0A1B0GTD5 131 aa5.02□□□□□ -1.61
SHROOM3-203ENST00000469923 C9orf118A6NHY6 69 aa5.02□□□□□ -1.61
SHROOM3-203ENST00000469923 LAMTOR3Q9UHA4 124 aa5.02□□□□□ -1.61
SHROOM3-203ENST00000469923 A0A1B0GV90 55 aa5.01□□□□□ -1.61
SHROOM3-203ENST00000469923 H3BUT2 72 aa5.01□□□□□ -1.61
SHROOM3-203ENST00000469923 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
SHROOM3-203ENST00000469923 PCOTHQ58A44 107 aa5□□□□□ -1.61
SHROOM3-203ENST00000469923 LINC00575Q6W349 94 aa5□□□□□ -1.61
SHROOM3-203ENST00000469923 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
SHROOM3-203ENST00000469923 VAMP3Q15836 100 aa4.99□□□□□ -1.61
SHROOM3-203ENST00000469923 C1orf195Q5TG92 126 aa4.99□□□□□ -1.61
SHROOM3-203ENST00000469923 A0A1W2PPM0 123 aa4.98□□□□□ -1.61
SHROOM3-203ENST00000469923 PSMB2P49721 201 aa4.98□□□□□ -1.61
SHROOM3-203ENST00000469923 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
SHROOM3-203ENST00000469923 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
SHROOM3-203ENST00000469923 TRIAP1O43715 76 aa4.97□□□□□ -1.61
SHROOM3-203ENST00000469923 FABP2P12104 132 aa4.97□□□□□ -1.61
SHROOM3-203ENST00000469923 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
SHROOM3-203ENST00000469923 Q6ZQY7 126 aa4.96□□□□□ -1.62
SHROOM3-203ENST00000469923 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
SHROOM3-203ENST00000469923 LYRM7Q5U5X0 104 aa4.95□□□□□ -1.62
SHROOM3-203ENST00000469923 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
SHROOM3-203ENST00000469923 IGLV8-61A0A075B6I0 122 aa4.94□□□□□ -1.62
SHROOM3-203ENST00000469923 K7EP34 96 aa4.94□□□□□ -1.62
SHROOM3-203ENST00000469923 COX6CP09669 75 aa4.94□□□□□ -1.62
SHROOM3-203ENST00000469923 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
SHROOM3-203ENST00000469923 CLEC2BQ92478 149 aa4.93□□□□□ -1.62
SHROOM3-203ENST00000469923 TCL1BO95988 128 aa4.92□□□□□ -1.62
SHROOM3-203ENST00000469923 MT1HP80294 61 aa4.92□□□□□ -1.62
SHROOM3-203ENST00000469923 CD164Q04900 197 aa4.92□□□□□ -1.62
SHROOM3-203ENST00000469923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.92□□□□□ -1.62
SHROOM3-203ENST00000469923 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
SHROOM3-203ENST00000469923 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
SHROOM3-203ENST00000469923 IGFL1Q6UW32 110 aa4.91□□□□□ -1.62
SHROOM3-203ENST00000469923 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
SHROOM3-203ENST00000469923 TRBV20-1A0A075B6N2 111 aa4.9□□□□□ -1.63
SHROOM3-203ENST00000469923 H0YGX0 51 aa4.9□□□□□ -1.63
SHROOM3-203ENST00000469923 LST1O00453 97 aa4.9□□□□□ -1.63
SHROOM3-203ENST00000469923 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
SHROOM3-203ENST00000469923 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
SHROOM3-203ENST00000469923 F8WEM9 126 aa4.89□□□□□ -1.63
SHROOM3-203ENST00000469923 H3BMG7 143 aa4.89□□□□□ -1.63
SHROOM3-203ENST00000469923 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
SHROOM3-203ENST00000469923 Q5XG85 94 aa4.88□□□□□ -1.63
SHROOM3-203ENST00000469923 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
SHROOM3-203ENST00000469923 TRACP01848 142 aa4.87□□□□□ -1.63
SHROOM3-203ENST00000469923 MTURNQ8N3F0 131 aa4.87□□□□□ -1.63
SHROOM3-203ENST00000469923 C9JAW5 83 aa4.86□□□□□ -1.63
SHROOM3-203ENST00000469923 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
SHROOM3-203ENST00000469923 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
SHROOM3-203ENST00000469923 PRO0461Q9UI25 63 aa4.86□□□□□ -1.63
SHROOM3-203ENST00000469923 TRBV7-7A0A0K0K1E9 115 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 A0A1B0GX51 115 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 DNAL4O96015 105 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 Q6JHZ5 121 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 USH2AO75445 5202 aa4.85□□□□□ -1.63
SHROOM3-203ENST00000469923 SNCGO76070 127 aa4.84□□□□□ -1.63
SHROOM3-203ENST00000469923 OBSCN-AS1Q96MR7 158 aa4.84□□□□□ -1.63
SHROOM3-203ENST00000469923 F8W1H4 67 aa4.83□□□□□ -1.64
SHROOM3-203ENST00000469923 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
SHROOM3-203ENST00000469923 SMCPP49901 116 aaPredicted RBP4.83□□□□□ -1.64
SHROOM3-203ENST00000469923 A0A1B0GV72 72 aa4.82□□□□□ -1.64
SHROOM3-203ENST00000469923 H3BT86 120 aa4.82□□□□□ -1.64
SHROOM3-203ENST00000469923 BAALC-AS2P0C853 105 aa4.82□□□□□ -1.64
SHROOM3-203ENST00000469923 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
SHROOM3-203ENST00000469923 ORMDL1Q9P0S3 153 aa4.82□□□□□ -1.64
SHROOM3-203ENST00000469923 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
SHROOM3-203ENST00000469923 ANKRD29Q8N6D5 301 aa4.81□□□□□ -1.64
SHROOM3-203ENST00000469923 A0A1W2PNM2 257 aa4.8□□□□□ -1.64
SHROOM3-203ENST00000469923 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
SHROOM3-203ENST00000469923 Q96NJ1 140 aa4.8□□□□□ -1.64
SHROOM3-203ENST00000469923 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
SHROOM3-203ENST00000469923 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
SHROOM3-203ENST00000469923 Q6Q795 121 aa4.78□□□□□ -1.64
SHROOM3-203ENST00000469923 TEN1Q86WV5 123 aa4.78□□□□□ -1.64
SHROOM3-203ENST00000469923 A0A087WSZ3 146 aa4.77□□□□□ -1.65
SHROOM3-203ENST00000469923 H3BQ85 93 aa4.77□□□□□ -1.65
SHROOM3-203ENST00000469923 DSCR10P59022 87 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms