RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LINC00575Q6W349 94 aa1.19□□□□□ -2.22
LSM5-209ENST00000468872 Q86TA4 180 aa1.19□□□□□ -2.22
LSM5-209ENST00000468872 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
LSM5-209ENST00000468872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.18□□□□□ -2.22
LSM5-209ENST00000468872 UBE2L5PA0A1B0GUS4 154 aa1.18□□□□□ -2.22
LSM5-209ENST00000468872 TMEM262E9PQX1 116 aa1.18□□□□□ -2.22
LSM5-209ENST00000468872 UBE2L3P68036 154 aaKnown RBP1.18□□□□□ -2.22
LSM5-209ENST00000468872 KLKP1Q107X0 134 aa1.18□□□□□ -2.22
LSM5-209ENST00000468872 AQP10Q96PS8 301 aa1.18□□□□□ -2.22
LSM5-209ENST00000468872 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 FAM24AA6NFZ4 105 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 M0R143 59 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 FXYD1O00168 92 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 SSSCA1O60232 199 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 COX7B2Q8TF08 81 aa1.17□□□□□ -2.22
LSM5-209ENST00000468872 TRBV7-1A0A0A6YYK4 115 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 A0A1W2PPM0 123 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 H0YGG7 62 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 ATP5EP56381 51 aaPredicted RBP1.16□□□□□ -2.22
LSM5-209ENST00000468872 S100A10P60903 97 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 SSBP1Q04837 148 aaKnown RBP1.16□□□□□ -2.22
LSM5-209ENST00000468872 C4orf33Q8N1A6 199 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 Q96NJ1 140 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 SNHG12Q9BXW3 62 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
LSM5-209ENST00000468872 PIGBOS1A0A0B4J2F0 54 aa1.15□□□□□ -2.23
LSM5-209ENST00000468872 PKIAP61925 76 aa1.15□□□□□ -2.23
LSM5-209ENST00000468872 BET1LQ9NYM9 111 aa1.15□□□□□ -2.23
LSM5-209ENST00000468872 DEFB4AO15263 64 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 MT-ATP8P03928 68 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 EDDM3BP56851 147 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 Q8N6K4 173 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 TMEM14BQ9NUH8 114 aa1.14□□□□□ -2.23
LSM5-209ENST00000468872 H3BQ15 152 aa1.13□□□□□ -2.23
LSM5-209ENST00000468872 SPINT3P49223 89 aa1.13□□□□□ -2.23
LSM5-209ENST00000468872 C10orf128Q5T292 105 aa1.13□□□□□ -2.23
LSM5-209ENST00000468872 FAM213BQ8TBF2 198 aa1.13□□□□□ -2.23
LSM5-209ENST00000468872 TRBV7-3A0A075B6L6 115 aa1.12□□□□□ -2.23
LSM5-209ENST00000468872 SNCAP37840 140 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 FAM74A4Q5TZK3 123 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 Q5VV11 94 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 VMO1Q7Z5L0 202 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 WFDC6Q9BQY6 131 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 V9GYV3 84 aa1.11□□□□□ -2.23
LSM5-209ENST00000468872 hADV29S1A0JD25 119 aa1.1□□□□□ -2.23
LSM5-209ENST00000468872 CCL18P55774 89 aa1.1□□□□□ -2.23
LSM5-209ENST00000468872 COL5A1-AS1Q5SY13 56 aa1.1□□□□□ -2.23
LSM5-209ENST00000468872 PPP1R1CQ8WVI7 109 aa1.1□□□□□ -2.23
LSM5-209ENST00000468872 NDUFA4L2Q9NRX3 87 aa1.1□□□□□ -2.23
LSM5-209ENST00000468872 DEFB131BA0A096LNP1 70 aa1.09□□□□□ -2.23
LSM5-209ENST00000468872 MT2AP02795 61 aa1.09□□□□□ -2.23
LSM5-209ENST00000468872 MT1FP04733 61 aa1.09□□□□□ -2.23
LSM5-209ENST00000468872 RPL37P61927 97 aaKnown RBP1.09□□□□□ -2.23
LSM5-209ENST00000468872 DEFB106AQ8N104 65 aa1.09□□□□□ -2.23
LSM5-209ENST00000468872 LENEPQ9Y5L5 61 aa1.09□□□□□ -2.23
LSM5-209ENST00000468872 TRGV1A0A0A0MS02 117 aa1.08□□□□□ -2.24
LSM5-209ENST00000468872 PPP1R17O96001 155 aa1.08□□□□□ -2.24
LSM5-209ENST00000468872 GNG11P61952 73 aa1.08□□□□□ -2.24
LSM5-209ENST00000468872 MYOZ3Q8TDC0 251 aa1.08□□□□□ -2.24
LSM5-209ENST00000468872 FAM167A-AS1Q96KT0 104 aa1.08□□□□□ -2.24
LSM5-209ENST00000468872 UBE2D3P61077 147 aa1.07□□□□□ -2.24
LSM5-209ENST00000468872 UBE2D2P62837 147 aa1.07□□□□□ -2.24
LSM5-209ENST00000468872 Q0VG73 95 aa1.07□□□□□ -2.24
LSM5-209ENST00000468872 MGST2Q99735 147 aa1.07□□□□□ -2.24
LSM5-209ENST00000468872 CDC42SE2Q9NRR3 84 aa1.07□□□□□ -2.24
LSM5-209ENST00000468872 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
LSM5-209ENST00000468872 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
LSM5-209ENST00000468872 TRAV22A0A0B4J277 110 aa1.06□□□□□ -2.24
LSM5-209ENST00000468872 SPINK13Q1W4C9 94 aa1.06□□□□□ -2.24
LSM5-209ENST00000468872 AMELXQ99217 191 aa1.06□□□□□ -2.24
LSM5-209ENST00000468872 DPY30Q9C005 99 aa1.06□□□□□ -2.24
LSM5-209ENST00000468872 NAP1L6A6NFF2 107 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 HMGN4O00479 90 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 GNGT2O14610 69 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 SPAG11BQ08648 103 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 SPAG11AQ6PDA7 123 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 ZNF720Q7Z2F6 126 aa1.05□□□□□ -2.24
LSM5-209ENST00000468872 CHKB-CPT1BH3BT56 60 aa1.04□□□□□ -2.24
LSM5-209ENST00000468872 ACYP2P14621 99 aa1.04□□□□□ -2.24
LSM5-209ENST00000468872 GNG2P59768 71 aa1.04□□□□□ -2.24
LSM5-209ENST00000468872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
LSM5-209ENST00000468872 TRAV1-2A0A0B4J238 106 aa1.03□□□□□ -2.24
LSM5-209ENST00000468872 ZNF137PP52743 207 aa1.03□□□□□ -2.24
LSM5-209ENST00000468872 SEC11AP67812 179 aa1.03□□□□□ -2.24
LSM5-209ENST00000468872 BAGE3Q86Y29 109 aa1.03□□□□□ -2.24
LSM5-209ENST00000468872 SCP2D1Q9UJQ7 156 aa1.03□□□□□ -2.24
LSM5-209ENST00000468872 IGLC7A0M8Q6 106 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 G3V318 75 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 M0R135 149 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 LINC00032P0C843 101 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 IGLC1P0CG04 106 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 PMCHL2Q9BQD1 86 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 VAMP8Q9BV40 100 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 AP4S1Q9Y587 144 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 R4GMQ9 66 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 V9GYH0 126 aa1.02□□□□□ -2.25
LSM5-209ENST00000468872 CRYM-AS1A6NIL9 109 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms