RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 UBE2BP63146 152 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 SPAG11BQ08648 103 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 PEA15Q15121 130 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-207ENST00000468723 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 C2orf82Q6UX34 121 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 UNQ6190/PRO20217Q6UXQ8 127 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 TOMM7Q9P0U1 55 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 NAT8BQ9UHF3 227 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 UBE2D4Q9Y2X8 147 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 RNF213Q63HN8 5207 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
GPNMB-207ENST00000468723 TRBV6-5A0A0K0K1A5 114 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 LOC107984640A0A0U1RRK4 108 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 SMIM27A0A1W2PRY6 76 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 TSTD3H0UI37 97 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 MT-ND6P03923 174 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 TRGC2P03986 189 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 TEX261Q6UWH6 196 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 SOSTDC1Q6X4U4 206 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 PRELID3AQ96N28 172 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 SMIM2Q9BVW6 85 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 CNFNQ9BYD5 112 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 CST9LQ9H4G1 147 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 PLAC8Q9NZF1 115 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 LPAP08519 4548 aa1.79□□□□□ -2.12
GPNMB-207ENST00000468723 TRBV27A0A0K0K1C4 114 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 ZNF25P17030 456 aaPredicted RBP1.78□□□□□ -2.12
GPNMB-207ENST00000468723 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
GPNMB-207ENST00000468723 NDUFA6P56556 154 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 HBBP68871 147 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 CIRBPQ14011 172 aaKnown RBP1.78□□□□□ -2.12
GPNMB-207ENST00000468723 TMEM126AQ9H061 195 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 C6orf48Q9UBA6 75 aa1.78□□□□□ -2.12
GPNMB-207ENST00000468723 F8W036 122 aa1.77□□□□□ -2.13
GPNMB-207ENST00000468723 NDUFA1O15239 70 aa1.77□□□□□ -2.13
GPNMB-207ENST00000468723 SPINK8P0C7L1 97 aa1.77□□□□□ -2.13
GPNMB-207ENST00000468723 ADCYAP1P18509 176 aa1.77□□□□□ -2.13
GPNMB-207ENST00000468723 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
GPNMB-207ENST00000468723 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
GPNMB-207ENST00000468723 SPINK6Q6UWN8 80 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 Q8N8P6 123 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
GPNMB-207ENST00000468723 TMEM141Q96I45 108 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 LINC01600Q96MT4 127 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 C20orf78Q9BR46 151 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 SPANXA1Q9NS26 97 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 CDKN2A-AS1Q9UH64 79 aa1.76□□□□□ -2.13
GPNMB-207ENST00000468723 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
GPNMB-207ENST00000468723 MUC17Q685J3 4493 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 TIMM17BO60830 172 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 PPP1R17O96001 155 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 MT-ND4LP03901 98 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 S100A8P05109 93 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 UBE2D1P51668 147 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 CKS1BP61024 79 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 RETNLBQ9BQ08 111 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 C2orf88Q9BSF0 95 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
GPNMB-207ENST00000468723 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
GPNMB-207ENST00000468723 LOC105371267A0A1B0GV96 52 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 K7ERJ3 54 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 MRPS36P82909 103 aaKnown RBP1.74□□□□□ -2.13
GPNMB-207ENST00000468723 COX7B2Q8TF08 81 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 AMELXQ99217 191 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 SMCO4Q9NRQ5 59 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 MRPL35Q9NZE8 188 aaKnown RBP1.74□□□□□ -2.13
GPNMB-207ENST00000468723 LINC00474Q9P2X8 69 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 LAMTOR3Q9UHA4 124 aa1.74□□□□□ -2.13
GPNMB-207ENST00000468723 TRBV30A0A0K0K1B3 111 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 TMEM218A2RU14 115 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 IGIPA6NJ69 53 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 APOC3P02656 99 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 S100PP25815 95 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 PRLHP81277 87 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 CLLU1Q5K131 121 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 HRCT1Q6UXD1 115 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 DIRC1Q969H9 104 aa1.73□□□□□ -2.13
GPNMB-207ENST00000468723 NCR3O14931 201 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 NPC2P61916 151 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 Q1T7F1 81 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 TMEM170BQ5T4T1 132 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 BAGE3Q86Y29 109 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 Q8IZM0 81 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 FAM19A2Q8N3H0 131 aa1.72□□□□□ -2.13
GPNMB-207ENST00000468723 NXT2Q9NPJ8 142 aaKnown RBP1.72□□□□□ -2.13
GPNMB-207ENST00000468723 LRP2P98164 4655 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 F8VRH5 84 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 BAALC-AS2P0C853 105 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 SMIM13P0DJ93 91 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 LINC00158P58513 81 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 COA5Q86WW8 74 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 PRR15Q8IV56 129 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 C18orf32Q8TCD1 76 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
GPNMB-207ENST00000468723 PMCHL2Q9BQD1 86 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms