RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 LCE6AA0A183 80 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 H3BNG1 76 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 PLGLAQ15195 96 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.58□□□□□ -2.5
SATB1-211ENST00000467628 RNF213Q63HN8 5207 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 KIAA1109Q2LD37 5005 aa-0.58□□□□□ -2.5
SATB1-211ENST00000467628 BPTFQ12830 3046 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.59□□□□□ -2.5
SATB1-211ENST00000467628 COL14A1Q05707 1796 aaKnown RBP-0.59□□□□□ -2.5
SATB1-211ENST00000467628 IQCF6A8MYZ5 107 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 H0YAA0 97 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 C3orf79P0CE67 100 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 RPL38P63173 70 aaKnown RBP-0.59□□□□□ -2.5
SATB1-211ENST00000467628 MAP3K1Q13233 1512 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 KIF20BQ96Q89 1820 aa-0.59□□□□□ -2.5
SATB1-211ENST00000467628 MYO3AQ8NEV4 1616 aa-0.6□□□□□ -2.5
SATB1-211ENST00000467628 SPTBN5Q9NRC6 3674 aaKnown RBP-0.6□□□□□ -2.5
SATB1-211ENST00000467628 UBR3Q6ZT12 1888 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 PKD1L3Q7Z443 1732 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 MYMXA0A1B0GTQ4 84 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 LYNX1G3V0Z9 82 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 S100A8P05109 93 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 SMIM11AP58511 58 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 PKIAP61925 76 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 PYY3Q5JQD4 70 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 PRO3102Q9H379 93 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 RABAC1Q9UI14 185 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 NIPBLQ6KC79 2804 aaeCLIP-0.6□□□□□ -2.51
SATB1-211ENST00000467628 MYH4Q9Y623 1939 aa-0.6□□□□□ -2.51
SATB1-211ENST00000467628 TLN2Q9Y4G6 2542 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 ANKRD26Q9UPS8 1709 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 ITPR1Q14643 2758 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.61□□□□□ -2.51
SATB1-211ENST00000467628 CYB5AP00167 134 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 LINC00158P58513 81 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 PRLHP81277 87 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 PEA15Q15121 130 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 PLIN4Q96Q06 1357 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 UBR1Q8IWV7 1749 aa-0.61□□□□□ -2.51
SATB1-211ENST00000467628 MT1HP80294 61 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 KRTAP19-5Q3LI72 72 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 LINC00643Q86TS7 51 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 DYNC1H1Q14204 4646 aaKnown RBP-0.62□□□□□ -2.51
SATB1-211ENST00000467628 NCOA2Q15596 1464 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 NWD1Q149M9 1564 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 DIP2BQ9P265 1576 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 ZNF831Q5JPB2 1677 aa-0.62□□□□□ -2.51
SATB1-211ENST00000467628 LRBAP50851 2863 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 CHD7Q9P2D1 2997 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 COL12A1Q99715 3063 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 MAGI3Q5TCQ9 1506 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 TMEM131LA2VDJ0 1609 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 DEPDC5O75140 1603 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 POLR1AO95602 1720 aaPredicted RBP-0.63□□□□□ -2.51
SATB1-211ENST00000467628 K7EP34 96 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 SNRPFP62306 86 aaKnown RBP-0.63□□□□□ -2.51
SATB1-211ENST00000467628 CCNB3Q8WWL7 1395 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 CCDC88BA6NC98 1476 aa-0.63□□□□□ -2.51
SATB1-211ENST00000467628 SPENQ96T58 3664 aaKnown RBP-0.63□□□□□ -2.51
SATB1-211ENST00000467628 ANKRD50Q9ULJ7 1429 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 NESP48681 1621 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 SUPT6HQ7KZ85 1726 aaKnown RBP-0.64□□□□□ -2.51
SATB1-211ENST00000467628 TIAM2Q8IVF5 1701 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 DOT1LQ8TEK3 1739 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 RYR2Q92736 4967 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 CEBPZOSA8MTT3 80 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 NDUFB1O75438 58 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 DEFB130BP0DP73 79 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 DEFB130AP0DP74 79 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 WFDC9Q8NEX5 89 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 S4R3F8 94 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 CEP295Q9C0D2 2601 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 CSMD1Q96PZ7 3565 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 URB2Q14146 1524 aaKnown RBP-0.64□□□□□ -2.51
SATB1-211ENST00000467628 TRRAPQ9Y4A5 3859 aa-0.64□□□□□ -2.51
SATB1-211ENST00000467628 SCN11AQ9UI33 1791 aa-0.65□□□□□ -2.51
SATB1-211ENST00000467628 S100A16Q96FQ6 103 aaKnown RBP-0.65□□□□□ -2.51
SATB1-211ENST00000467628 ABCC3O15438 1527 aa-0.65□□□□□ -2.51
SATB1-211ENST00000467628 RGPD3A6NKT7 1758 aaPredicted RBP-0.65□□□□□ -2.51
SATB1-211ENST00000467628 RGPD4Q7Z3J3 1758 aa-0.65□□□□□ -2.51
SATB1-211ENST00000467628 PVALEFA0A1B0GWK0 134 aa-0.66□□□□□ -2.52
SATB1-211ENST00000467628 ACYP1P07311 99 aa-0.66□□□□□ -2.52
SATB1-211ENST00000467628 IFI6P09912 130 aa-0.66□□□□□ -2.52
SATB1-211ENST00000467628 TDRG1Q3Y452 100 aa-0.66□□□□□ -2.52
SATB1-211ENST00000467628 V9GYS6 101 aa-0.66□□□□□ -2.52
SATB1-211ENST00000467628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.66□□□□□ -2.52
SATB1-211ENST00000467628 DNAH17Q9UFH2 4485 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 LTN1O94822 1766 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 UMAD1C9J7I0 102 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 IAPPP10997 89 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 HMGA1P17096 107 aaKnown RBP-0.67□□□□□ -2.52
SATB1-211ENST00000467628 DEFB121Q5J5C9 76 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 MYO9AB2RTY4 2548 aa-0.67□□□□□ -2.52
SATB1-211ENST00000467628 AKAP12Q02952 1782 aa-0.68□□□□□ -2.52
SATB1-211ENST00000467628 DEFB131BA0A096LNP1 70 aa-0.68□□□□□ -2.52
SATB1-211ENST00000467628 IFI27P40305 119 aaPredicted RBP-0.68□□□□□ -2.52
SATB1-211ENST00000467628 SPTAN1Q13813 2472 aaKnown RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms