RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 PRO1933Q9H354 126 aa14.7□□□□□ -0.06
PDCD4-205ENST00000467574 IGLV7-46A0A075B6I9 117 aa14.69□□□□□ -0.06
PDCD4-205ENST00000467574 H0YGX0 51 aa14.67□□□□□ -0.06
PDCD4-205ENST00000467574 FP248Q71RG6 208 aaPredicted RBP14.67□□□□□ -0.06
PDCD4-205ENST00000467574 TRIAP1O43715 76 aa14.65□□□□□ -0.06
PDCD4-205ENST00000467574 TPRXLQ17RH7 258 aa14.65□□□□□ -0.06
PDCD4-205ENST00000467574 HRCT1Q6UXD1 115 aa14.64□□□□□ -0.07
PDCD4-205ENST00000467574 A0A0G2JQZ4 141 aa14.63□□□□□ -0.07
PDCD4-205ENST00000467574 LOC105371267A0A1B0GV96 52 aa14.63□□□□□ -0.07
PDCD4-205ENST00000467574 CD164Q04900 197 aa14.63□□□□□ -0.07
PDCD4-205ENST00000467574 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
PDCD4-205ENST00000467574 IGLV8-61A0A075B6I0 122 aa14.58□□□□□ -0.08
PDCD4-205ENST00000467574 F8WEM9 126 aa14.58□□□□□ -0.08
PDCD4-205ENST00000467574 A0A1B0GX51 115 aa14.57□□□□□ -0.08
PDCD4-205ENST00000467574 LIMD2Q9BT23 127 aa14.57□□□□□ -0.08
PDCD4-205ENST00000467574 OCIAD2Q56VL3 154 aa14.54□□□□□ -0.08
PDCD4-205ENST00000467574 CLEC2BQ92478 149 aa14.54□□□□□ -0.08
PDCD4-205ENST00000467574 SNCGO76070 127 aa14.53□□□□□ -0.08
PDCD4-205ENST00000467574 KRTAP13-3Q3SY46 172 aa14.53□□□□□ -0.08
PDCD4-205ENST00000467574 Q5XG85 94 aa14.52□□□□□ -0.09
PDCD4-205ENST00000467574 PSMB2P49721 201 aa14.51□□□□□ -0.09
PDCD4-205ENST00000467574 MUC17Q685J3 4493 aa14.51□□□□□ -0.09
PDCD4-205ENST00000467574 Q6JHZ5 121 aa14.5□□□□□ -0.09
PDCD4-205ENST00000467574 IGFL1Q6UW32 110 aa14.5□□□□□ -0.09
PDCD4-205ENST00000467574 SNHG12Q9BXW3 62 aa14.5□□□□□ -0.09
PDCD4-205ENST00000467574 CDIP1Q9H305 208 aa14.49□□□□□ -0.09
PDCD4-205ENST00000467574 H3BUT2 72 aa14.46□□□□□ -0.09
PDCD4-205ENST00000467574 M0R143 59 aa14.45□□□□□ -0.1
PDCD4-205ENST00000467574 COX6CP09669 75 aa14.45□□□□□ -0.1
PDCD4-205ENST00000467574 NDUFV3P56181 108 aaKnown RBP14.43□□□□□ -0.1
PDCD4-205ENST00000467574 TSTD3H0UI37 97 aa14.42□□□□□ -0.1
PDCD4-205ENST00000467574 MUC2Q02817 5179 aa14.42□□□□□ -0.1
PDCD4-205ENST00000467574 TRBV7-7A0A0K0K1E9 115 aa14.39□□□□□ -0.11
PDCD4-205ENST00000467574 C1orf195Q5TG92 126 aa14.39□□□□□ -0.11
PDCD4-205ENST00000467574 DNAL4O96015 105 aa14.38□□□□□ -0.11
PDCD4-205ENST00000467574 GHRHP01286 108 aa14.38□□□□□ -0.11
PDCD4-205ENST00000467574 FABP2P12104 132 aa14.37□□□□□ -0.11
PDCD4-205ENST00000467574 ORMDL1Q9P0S3 153 aa14.36□□□□□ -0.11
PDCD4-205ENST00000467574 LST1O00453 97 aa14.35□□□□□ -0.11
PDCD4-205ENST00000467574 TCL1BO95988 128 aa14.33□□□□□ -0.12
PDCD4-205ENST00000467574 TRACP01848 142 aa14.33□□□□□ -0.12
PDCD4-205ENST00000467574 H3BMG7 143 aa14.32□□□□□ -0.12
PDCD4-205ENST00000467574 SCGB1C2P0DMR2 95 aa14.32□□□□□ -0.12
PDCD4-205ENST00000467574 ASB16-AS1Q495Z4 193 aa14.31□□□□□ -0.12
PDCD4-205ENST00000467574 H3BQ85 93 aa14.3□□□□□ -0.12
PDCD4-205ENST00000467574 Q6Q795 121 aa14.3□□□□□ -0.12
PDCD4-205ENST00000467574 NAA38Q9BRA0 125 aaKnown RBP14.29□□□□□ -0.12
PDCD4-205ENST00000467574 TMEM256-PLSCR3K7ERE1 68 aa14.27□□□□□ -0.13
PDCD4-205ENST00000467574 XP32Q5T750 250 aa14.27□□□□□ -0.13
PDCD4-205ENST00000467574 TEN1Q86WV5 123 aa14.25□□□□□ -0.13
PDCD4-205ENST00000467574 BATFQ16520 125 aa14.23□□□□□ -0.13
PDCD4-205ENST00000467574 UBE2V1Q13404 147 aa14.22□□□□□ -0.13
PDCD4-205ENST00000467574 A0A1W2PNM2 257 aa14.21□□□□□ -0.13
PDCD4-205ENST00000467574 C9orf92A6NGG3 77 aa14.21□□□□□ -0.13
PDCD4-205ENST00000467574 A0A1B0GV72 72 aa14.2□□□□□ -0.14
PDCD4-205ENST00000467574 ATXN8Q156A1 80 aa14.16□□□□□ -0.14
PDCD4-205ENST00000467574 A0A087WSZ3 146 aa14.15□□□□□ -0.14
PDCD4-205ENST00000467574 ANKRD29Q8N6D5 301 aa14.15□□□□□ -0.14
PDCD4-205ENST00000467574 SS18L2Q9UHA2 77 aa14.15□□□□□ -0.14
PDCD4-205ENST00000467574 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
PDCD4-205ENST00000467574 SEC61BP60468 96 aaKnown RBP14.12□□□□□ -0.15
PDCD4-205ENST00000467574 TRBV7-4A0A0J9YYF1 115 aa14.1□□□□□ -0.15
PDCD4-205ENST00000467574 TAX1BP3O14907 124 aa14.09□□□□□ -0.15
PDCD4-205ENST00000467574 Q96NJ1 140 aa14.09□□□□□ -0.15
PDCD4-205ENST00000467574 LYRM7Q5U5X0 104 aa14.08□□□□□ -0.16
PDCD4-205ENST00000467574 C9orf118A6NHY6 69 aa14.06□□□□□ -0.16
PDCD4-205ENST00000467574 KRTAP4-1Q9BYQ7 146 aa14.06□□□□□ -0.16
PDCD4-205ENST00000467574 CCKP06307 115 aa14.05□□□□□ -0.16
PDCD4-205ENST00000467574 RBM3P98179 157 aaKnown RBP14.05□□□□□ -0.16
PDCD4-205ENST00000467574 TRBV20-1A0A075B6N2 111 aa14.04□□□□□ -0.16
PDCD4-205ENST00000467574 FAT4Q6V0I7 4981 aa14.03□□□□□ -0.16
PDCD4-205ENST00000467574 A0A1W2PPM0 123 aa13.99□□□□□ -0.17
PDCD4-205ENST00000467574 DSCR8Q96T75 97 aa13.99□□□□□ -0.17
PDCD4-205ENST00000467574 C9JAW5 83 aa13.96□□□□□ -0.17
PDCD4-205ENST00000467574 RPL37P61927 97 aaKnown RBP13.96□□□□□ -0.17
PDCD4-205ENST00000467574 PCOTHQ58A44 107 aa13.96□□□□□ -0.17
PDCD4-205ENST00000467574 A0A0U1RQV1 116 aa13.94□□□□□ -0.18
PDCD4-205ENST00000467574 OBSCN-AS1Q96MR7 158 aa13.94□□□□□ -0.18
PDCD4-205ENST00000467574 VPS25Q9BRG1 176 aa13.94□□□□□ -0.18
PDCD4-205ENST00000467574 JMJD7-PLA2G4BH0Y9G9 81 aa13.92□□□□□ -0.18
PDCD4-205ENST00000467574 LINC00472Q9H8W2 130 aa13.91□□□□□ -0.18
PDCD4-205ENST00000467574 Q6ZQT0 140 aa13.89□□□□□ -0.19
PDCD4-205ENST00000467574 LOC110117498A0A087WWA1 95 aa13.88□□□□□ -0.19
PDCD4-205ENST00000467574 SIGMAR1Q99720 223 aa13.88□□□□□ -0.19
PDCD4-205ENST00000467574 IGKV4-1P06312 121 aa13.85□□□□□ -0.19
PDCD4-205ENST00000467574 COL5A1-AS1Q5SY13 56 aa13.85□□□□□ -0.19
PDCD4-205ENST00000467574 MTURNQ8N3F0 131 aa13.85□□□□□ -0.19
PDCD4-205ENST00000467574 H3BT86 120 aa13.84□□□□□ -0.19
PDCD4-205ENST00000467574 C14orf132Q9NPU4 83 aa13.84□□□□□ -0.19
PDCD4-205ENST00000467574 DEFB116Q30KQ4 102 aa13.83□□□□□ -0.2
PDCD4-205ENST00000467574 Q75L30 129 aa13.83□□□□□ -0.2
PDCD4-205ENST00000467574 SPCS1Q9Y6A9 102 aa13.81□□□□□ -0.2
PDCD4-205ENST00000467574 PDE6GP18545 87 aa13.8□□□□□ -0.2
PDCD4-205ENST00000467574 DSCR10P59022 87 aa13.79□□□□□ -0.2
PDCD4-205ENST00000467574 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
PDCD4-205ENST00000467574 LCE2AQ5TA79 106 aaPredicted RBP13.77□□□□□ -0.21
PDCD4-205ENST00000467574 C20orf166-AS1Q96NR2 134 aa13.77□□□□□ -0.21
PDCD4-205ENST00000467574 A0A1B0GW54 56 aa13.75□□□□□ -0.21
PDCD4-205ENST00000467574 PCP4L1A6NKN8 68 aa13.75□□□□□ -0.21
PDCD4-205ENST00000467574 A8MUU9 505 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms