RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 C1orf195Q5TG92 126 aa11.01□□□□□ -0.65
COL6A1-203ENST00000466285 TAL2Q16559 108 aa11□□□□□ -0.65
COL6A1-203ENST00000466285 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
COL6A1-203ENST00000466285 CD164Q04900 197 aa10.99□□□□□ -0.65
COL6A1-203ENST00000466285 LINC00518Q8N0U6 118 aa10.98□□□□□ -0.65
COL6A1-203ENST00000466285 HIST1H4GQ99525 98 aa10.98□□□□□ -0.65
COL6A1-203ENST00000466285 C12orf57Q99622 126 aa10.98□□□□□ -0.65
COL6A1-203ENST00000466285 PRO1933Q9H354 126 aa10.98□□□□□ -0.65
COL6A1-203ENST00000466285 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
COL6A1-203ENST00000466285 A4D1N5 150 aa10.96□□□□□ -0.65
COL6A1-203ENST00000466285 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
COL6A1-203ENST00000466285 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
COL6A1-203ENST00000466285 RPL37P61927 97 aaKnown RBP10.95□□□□□ -0.66
COL6A1-203ENST00000466285 Q5XG85 94 aa10.94□□□□□ -0.66
COL6A1-203ENST00000466285 HSD52Q0P140 79 aa10.93□□□□□ -0.66
COL6A1-203ENST00000466285 CEND1Q8N111 149 aa10.93□□□□□ -0.66
COL6A1-203ENST00000466285 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
COL6A1-203ENST00000466285 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
COL6A1-203ENST00000466285 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
COL6A1-203ENST00000466285 FXYD2P54710 66 aa10.89□□□□□ -0.67
COL6A1-203ENST00000466285 CFC1P0CG37 223 aa10.88□□□□□ -0.67
COL6A1-203ENST00000466285 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
COL6A1-203ENST00000466285 A6NDN8 102 aa10.87□□□□□ -0.67
COL6A1-203ENST00000466285 TSTD3H0UI37 97 aa10.85□□□□□ -0.67
COL6A1-203ENST00000466285 M0R2T5 61 aa10.84□□□□□ -0.67
COL6A1-203ENST00000466285 SMIM11BQ8TCY0 68 aa10.84□□□□□ -0.67
COL6A1-203ENST00000466285 TMEM238LA0A1B0GVL6 79 aa10.83□□□□□ -0.68
COL6A1-203ENST00000466285 A6NJY4 79 aa10.83□□□□□ -0.68
COL6A1-203ENST00000466285 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
COL6A1-203ENST00000466285 BVES-AS1Q5T3Y7 98 aa10.81□□□□□ -0.68
COL6A1-203ENST00000466285 RAB37Q96AX2 223 aa10.76□□□□□ -0.69
COL6A1-203ENST00000466285 NHP2Q9NX24 153 aaKnown RBP10.76□□□□□ -0.69
COL6A1-203ENST00000466285 PRO1854Q9UHT4 67 aa10.76□□□□□ -0.69
COL6A1-203ENST00000466285 K7ERJ3 54 aa10.74□□□□□ -0.69
COL6A1-203ENST00000466285 M0R143 59 aa10.74□□□□□ -0.69
COL6A1-203ENST00000466285 TCL1BO95988 128 aa10.73□□□□□ -0.69
COL6A1-203ENST00000466285 IGFL1Q6UW32 110 aa10.73□□□□□ -0.69
COL6A1-203ENST00000466285 Q6ZQY7 126 aa10.72□□□□□ -0.69
COL6A1-203ENST00000466285 LINC00575Q6W349 94 aa10.71□□□□□ -0.69
COL6A1-203ENST00000466285 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
COL6A1-203ENST00000466285 OBSCN-AS1Q96MR7 158 aa10.7□□□□□ -0.7
COL6A1-203ENST00000466285 F8WEM9 126 aa10.68□□□□□ -0.7
COL6A1-203ENST00000466285 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
COL6A1-203ENST00000466285 USH2AO75445 5202 aa10.67□□□□□ -0.7
COL6A1-203ENST00000466285 Q6Q795 121 aa10.66□□□□□ -0.7
COL6A1-203ENST00000466285 SSPOA2VEC9 5147 aa10.65□□□□□ -0.7
COL6A1-203ENST00000466285 TRIAP1O43715 76 aa10.65□□□□□ -0.7
COL6A1-203ENST00000466285 VAMP3Q15836 100 aa10.65□□□□□ -0.7
COL6A1-203ENST00000466285 hADV29S1A0JD25 119 aa10.63□□□□□ -0.71
COL6A1-203ENST00000466285 H3BUT2 72 aa10.63□□□□□ -0.71
COL6A1-203ENST00000466285 Q75L30 129 aa10.63□□□□□ -0.71
COL6A1-203ENST00000466285 H0YGX0 51 aa10.62□□□□□ -0.71
COL6A1-203ENST00000466285 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
COL6A1-203ENST00000466285 Q6JHZ5 121 aa10.61□□□□□ -0.71
COL6A1-203ENST00000466285 FAM218AQ96MZ4 157 aa10.61□□□□□ -0.71
COL6A1-203ENST00000466285 SNHG12Q9BXW3 62 aa10.58□□□□□ -0.72
COL6A1-203ENST00000466285 A0A1B0GX51 115 aa10.57□□□□□ -0.72
COL6A1-203ENST00000466285 KRTAP9-8Q9BYQ0 159 aa10.57□□□□□ -0.72
COL6A1-203ENST00000466285 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
COL6A1-203ENST00000466285 BATFQ16520 125 aa10.55□□□□□ -0.72
COL6A1-203ENST00000466285 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.54□□□□□ -0.72
COL6A1-203ENST00000466285 Q96NJ1 140 aa10.54□□□□□ -0.72
COL6A1-203ENST00000466285 TAX1BP3O14907 124 aa10.52□□□□□ -0.73
COL6A1-203ENST00000466285 COX6CP09669 75 aa10.52□□□□□ -0.73
COL6A1-203ENST00000466285 PSMB2P49721 201 aa10.52□□□□□ -0.73
COL6A1-203ENST00000466285 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-203ENST00000466285 LST1O00453 97 aa10.5□□□□□ -0.73
COL6A1-203ENST00000466285 PPDPFLQ8WWR9 84 aa10.49□□□□□ -0.73
COL6A1-203ENST00000466285 C20orf166-AS1Q96NR2 134 aa10.49□□□□□ -0.73
COL6A1-203ENST00000466285 NAA38Q9BRA0 125 aaKnown RBP10.48□□□□□ -0.73
COL6A1-203ENST00000466285 C9orf118A6NHY6 69 aa10.47□□□□□ -0.73
COL6A1-203ENST00000466285 PCP4L1A6NKN8 68 aa10.47□□□□□ -0.73
COL6A1-203ENST00000466285 A8MUU9 505 aa10.47□□□□□ -0.73
COL6A1-203ENST00000466285 TRACP01848 142 aa10.46□□□□□ -0.73
COL6A1-203ENST00000466285 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
COL6A1-203ENST00000466285 SNCGO76070 127 aa10.44□□□□□ -0.74
COL6A1-203ENST00000466285 COL5A1-AS1Q5SY13 56 aa10.44□□□□□ -0.74
COL6A1-203ENST00000466285 KRTAP9-7A8MTY7 169 aa10.43□□□□□ -0.74
COL6A1-203ENST00000466285 SCGB1C2P0DMR2 95 aa10.43□□□□□ -0.74
COL6A1-203ENST00000466285 DSCR10P59022 87 aa10.43□□□□□ -0.74
COL6A1-203ENST00000466285 A0A087WSZ3 146 aa10.41□□□□□ -0.74
COL6A1-203ENST00000466285 MT2AP02795 61 aa10.41□□□□□ -0.74
COL6A1-203ENST00000466285 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
COL6A1-203ENST00000466285 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.74
COL6A1-203ENST00000466285 FCGBPQ9Y6R7 5405 aaPredicted RBP10.39□□□□□ -0.75
COL6A1-203ENST00000466285 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
COL6A1-203ENST00000466285 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
COL6A1-203ENST00000466285 H3BQ85 93 aa10.37□□□□□ -0.75
COL6A1-203ENST00000466285 DNAL4O96015 105 aa10.37□□□□□ -0.75
COL6A1-203ENST00000466285 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
COL6A1-203ENST00000466285 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
COL6A1-203ENST00000466285 ORMDL1Q9P0S3 153 aa10.37□□□□□ -0.75
COL6A1-203ENST00000466285 GHRHP01286 108 aa10.36□□□□□ -0.75
COL6A1-203ENST00000466285 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
COL6A1-203ENST00000466285 MT1FP04733 61 aa10.35□□□□□ -0.75
COL6A1-203ENST00000466285 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
COL6A1-203ENST00000466285 FABP2P12104 132 aa10.33□□□□□ -0.76
COL6A1-203ENST00000466285 TMEM256-PLSCR3K7ERE1 68 aa10.32□□□□□ -0.76
COL6A1-203ENST00000466285 LCE2BO14633 110 aa10.32□□□□□ -0.76
COL6A1-203ENST00000466285 UBE2V1Q13404 147 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms