RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 F8WEM9 126 aa6.63□□□□□ -1.35
NPHP3-203ENST00000465756 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
NPHP3-203ENST00000465756 LST1O00453 97 aa6.63□□□□□ -1.35
NPHP3-203ENST00000465756 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
NPHP3-203ENST00000465756 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
NPHP3-203ENST00000465756 PSPHP1O15172 72 aa6.62□□□□□ -1.35
NPHP3-203ENST00000465756 SMCR5Q8TEV8 140 aa6.62□□□□□ -1.35
NPHP3-203ENST00000465756 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
NPHP3-203ENST00000465756 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
NPHP3-203ENST00000465756 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
NPHP3-203ENST00000465756 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
NPHP3-203ENST00000465756 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
NPHP3-203ENST00000465756 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
NPHP3-203ENST00000465756 HERC2O95714 4834 aa6.6□□□□□ -1.35
NPHP3-203ENST00000465756 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
NPHP3-203ENST00000465756 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-203ENST00000465756 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-203ENST00000465756 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-203ENST00000465756 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
NPHP3-203ENST00000465756 RYR1P21817 5038 aa6.58□□□□□ -1.36
NPHP3-203ENST00000465756 KCNQ1DNQ9H478 68 aa6.58□□□□□ -1.36
NPHP3-203ENST00000465756 TYMSOSQ8TAI1 123 aa6.57□□□□□ -1.36
NPHP3-203ENST00000465756 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
NPHP3-203ENST00000465756 TRBV10-3A0A0K0K1G6 114 aa6.57□□□□□ -1.36
NPHP3-203ENST00000465756 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
NPHP3-203ENST00000465756 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
NPHP3-203ENST00000465756 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
NPHP3-203ENST00000465756 ORMDL1Q9P0S3 153 aa6.56□□□□□ -1.36
NPHP3-203ENST00000465756 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
NPHP3-203ENST00000465756 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
NPHP3-203ENST00000465756 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
NPHP3-203ENST00000465756 PRLHP81277 87 aa6.55□□□□□ -1.36
NPHP3-203ENST00000465756 IMUPQ9GZP8 106 aa6.55□□□□□ -1.36
NPHP3-203ENST00000465756 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
NPHP3-203ENST00000465756 PMAIP1Q13794 54 aa6.54□□□□□ -1.36
NPHP3-203ENST00000465756 ZNF73O43830 326 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-203ENST00000465756 COX7BP24311 80 aa6.54□□□□□ -1.36
NPHP3-203ENST00000465756 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
NPHP3-203ENST00000465756 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
NPHP3-203ENST00000465756 DEFB105AQ8NG35 78 aa6.53□□□□□ -1.36
NPHP3-203ENST00000465756 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
NPHP3-203ENST00000465756 Q8N9L7 120 aa6.52□□□□□ -1.36
NPHP3-203ENST00000465756 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.36
NPHP3-203ENST00000465756 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
NPHP3-203ENST00000465756 SMIM26A0A096LP01 95 aa6.52□□□□□ -1.37
NPHP3-203ENST00000465756 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
NPHP3-203ENST00000465756 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
NPHP3-203ENST00000465756 IGLV6-57P01721 117 aa6.51□□□□□ -1.37
NPHP3-203ENST00000465756 PKD1P98161 4303 aa6.5□□□□□ -1.37
NPHP3-203ENST00000465756 Q6ZRX8 168 aa6.5□□□□□ -1.37
NPHP3-203ENST00000465756 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
NPHP3-203ENST00000465756 SPRR1AP35321 89 aa6.5□□□□□ -1.37
NPHP3-203ENST00000465756 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
NPHP3-203ENST00000465756 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
NPHP3-203ENST00000465756 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
NPHP3-203ENST00000465756 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
NPHP3-203ENST00000465756 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
NPHP3-203ENST00000465756 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
NPHP3-203ENST00000465756 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
NPHP3-203ENST00000465756 KRTAP13-1Q8IUC0 172 aa6.46□□□□□ -1.37
NPHP3-203ENST00000465756 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
NPHP3-203ENST00000465756 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
NPHP3-203ENST00000465756 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
NPHP3-203ENST00000465756 LITAFQ99732 161 aa6.45□□□□□ -1.38
NPHP3-203ENST00000465756 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
NPHP3-203ENST00000465756 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
NPHP3-203ENST00000465756 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 Q8NBF4 154 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 Q6JHZ5 121 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 H3BQ85 93 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 CCKP06307 115 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 Q5XG85 94 aa6.43□□□□□ -1.38
NPHP3-203ENST00000465756 H0YGX0 51 aa6.42□□□□□ -1.38
NPHP3-203ENST00000465756 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
NPHP3-203ENST00000465756 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
NPHP3-203ENST00000465756 HSPG2P98160 4391 aa6.42□□□□□ -1.38
NPHP3-203ENST00000465756 SPINK1P00995 79 aa6.42□□□□□ -1.38
NPHP3-203ENST00000465756 NREPQ16612 68 aa6.41□□□□□ -1.38
NPHP3-203ENST00000465756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.41□□□□□ -1.38
NPHP3-203ENST00000465756 IGLV9-49A0A0B4J1Y8 123 aa6.4□□□□□ -1.38
NPHP3-203ENST00000465756 DEFB116Q30KQ4 102 aa6.4□□□□□ -1.38
NPHP3-203ENST00000465756 A6NED7 52 aa6.4□□□□□ -1.39
NPHP3-203ENST00000465756 Q6ZQY7 126 aa6.4□□□□□ -1.39
NPHP3-203ENST00000465756 Q8NDZ9 215 aa6.4□□□□□ -1.39
NPHP3-203ENST00000465756 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
NPHP3-203ENST00000465756 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-203ENST00000465756 JMJD7-PLA2G4BH0Y9G9 81 aa6.39□□□□□ -1.39
NPHP3-203ENST00000465756 MOBPQ13875 183 aa6.38□□□□□ -1.39
NPHP3-203ENST00000465756 PKHD1P08F94 4074 aa6.38□□□□□ -1.39
NPHP3-203ENST00000465756 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-203ENST00000465756 TRAV7A0A075B6U4 112 aa6.37□□□□□ -1.39
NPHP3-203ENST00000465756 Q9BRP9 147 aa6.37□□□□□ -1.39
NPHP3-203ENST00000465756 TMEM256-PLSCR3K7ERE1 68 aa6.37□□□□□ -1.39
NPHP3-203ENST00000465756 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
NPHP3-203ENST00000465756 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
NPHP3-203ENST00000465756 BPY2O14599 106 aa6.36□□□□□ -1.39
NPHP3-203ENST00000465756 SPRR1BP22528 89 aa6.36□□□□□ -1.39
NPHP3-203ENST00000465756 A0A087X002 238 aa6.34□□□□□ -1.39
NPHP3-203ENST00000465756 ANAPC11Q9NYG5 84 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms