RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 STAB1Q9NY15 2570 aa5□□□□□ -1.61
RTL9-201ENST00000465301 UTRNP46939 3433 aa5□□□□□ -1.61
RTL9-201ENST00000465301 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
RTL9-201ENST00000465301 ITPR3Q14573 2671 aa4.96□□□□□ -1.62
RTL9-201ENST00000465301 TEP1Q99973 2627 aaKnown RBP4.95□□□□□ -1.62
RTL9-201ENST00000465301 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
RTL9-201ENST00000465301 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
RTL9-201ENST00000465301 CFAP46Q8IYW2 2715 aa4.92□□□□□ -1.62
RTL9-201ENST00000465301 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
RTL9-201ENST00000465301 KRTAP10-1P60331 282 aa4.9□□□□□ -1.63
RTL9-201ENST00000465301 Q5VV11 94 aa4.9□□□□□ -1.63
RTL9-201ENST00000465301 KRTAP26-1Q6PEX3 210 aa4.89□□□□□ -1.63
RTL9-201ENST00000465301 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
RTL9-201ENST00000465301 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
RTL9-201ENST00000465301 CR1P17927 2039 aa4.87□□□□□ -1.63
RTL9-201ENST00000465301 Q6ZR54 194 aa4.86□□□□□ -1.63
RTL9-201ENST00000465301 PANO1I0J062 215 aa4.86□□□□□ -1.63
RTL9-201ENST00000465301 H3BS24 57 aa4.86□□□□□ -1.63
RTL9-201ENST00000465301 CENPFP49454 3210 aa4.84□□□□□ -1.64
RTL9-201ENST00000465301 FLNAP21333 2647 aaKnown RBP4.83□□□□□ -1.64
RTL9-201ENST00000465301 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
RTL9-201ENST00000465301 SRCAPQ6ZRS2 3230 aa4.83□□□□□ -1.64
RTL9-201ENST00000465301 Q5XG85 94 aa4.81□□□□□ -1.64
RTL9-201ENST00000465301 KRTAP1-5Q9BYS1 174 aa4.81□□□□□ -1.64
RTL9-201ENST00000465301 KRTAP21-3Q3LHN1 58 aa4.8□□□□□ -1.64
RTL9-201ENST00000465301 Q8NDZ9 215 aa4.8□□□□□ -1.64
RTL9-201ENST00000465301 COL6A5A8TX70 2615 aa4.79□□□□□ -1.64
RTL9-201ENST00000465301 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
RTL9-201ENST00000465301 UNC79Q9P2D8 2635 aa4.78□□□□□ -1.64
RTL9-201ENST00000465301 A8MUU9 505 aa4.77□□□□□ -1.65
RTL9-201ENST00000465301 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
RTL9-201ENST00000465301 GCN1Q92616 2671 aaKnown RBP4.75□□□□□ -1.65
RTL9-201ENST00000465301 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
RTL9-201ENST00000465301 NBEAL1Q6ZS30 2694 aa4.74□□□□□ -1.65
RTL9-201ENST00000465301 HTTP42858 3142 aa4.73□□□□□ -1.65
RTL9-201ENST00000465301 DMBT1Q9UGM3 2413 aaPredicted RBP4.73□□□□□ -1.65
RTL9-201ENST00000465301 TNP1P09430 55 aa4.73□□□□□ -1.65
RTL9-201ENST00000465301 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
RTL9-201ENST00000465301 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
RTL9-201ENST00000465301 CENPEQ02224 2701 aa4.71□□□□□ -1.66
RTL9-201ENST00000465301 A0A087X002 238 aa4.7□□□□□ -1.66
RTL9-201ENST00000465301 TEX15Q9BXT5 2789 aa4.7□□□□□ -1.66
RTL9-201ENST00000465301 DNAH12Q6ZR08 3092 aa4.69□□□□□ -1.66
RTL9-201ENST00000465301 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
RTL9-201ENST00000465301 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
RTL9-201ENST00000465301 BPTFQ12830 3046 aa4.66□□□□□ -1.66
RTL9-201ENST00000465301 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
RTL9-201ENST00000465301 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
RTL9-201ENST00000465301 BRCA2P51587 3418 aa4.62□□□□□ -1.67
RTL9-201ENST00000465301 TRANK1O15050 2925 aa4.62□□□□□ -1.67
RTL9-201ENST00000465301 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
RTL9-201ENST00000465301 IGSF10Q6WRI0 2623 aa4.62□□□□□ -1.67
RTL9-201ENST00000465301 PCNTO95613 3336 aa4.6□□□□□ -1.67
RTL9-201ENST00000465301 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
RTL9-201ENST00000465301 CEP350Q5VT06 3117 aa4.6□□□□□ -1.67
RTL9-201ENST00000465301 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.67
RTL9-201ENST00000465301 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.68
RTL9-201ENST00000465301 A8MU10 97 aa4.58□□□□□ -1.68
RTL9-201ENST00000465301 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
RTL9-201ENST00000465301 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
RTL9-201ENST00000465301 A6NN06 94 aa4.55□□□□□ -1.68
RTL9-201ENST00000465301 CHD9Q3L8U1 2897 aa4.54□□□□□ -1.68
RTL9-201ENST00000465301 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
RTL9-201ENST00000465301 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
RTL9-201ENST00000465301 FLNCQ14315 2725 aa4.53□□□□□ -1.68
RTL9-201ENST00000465301 PRRC2CQ9Y520 2896 aaKnown RBP4.52□□□□□ -1.69
RTL9-201ENST00000465301 CHD7Q9P2D1 2997 aa4.52□□□□□ -1.69
RTL9-201ENST00000465301 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
RTL9-201ENST00000465301 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
RTL9-201ENST00000465301 ZNF292O60281 2723 aa4.51□□□□□ -1.69
RTL9-201ENST00000465301 MKI67P46013 3256 aaKnown RBP4.5□□□□□ -1.69
RTL9-201ENST00000465301 TNRC18O15417 2968 aaPredicted RBP4.49□□□□□ -1.69
RTL9-201ENST00000465301 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
RTL9-201ENST00000465301 TENM4Q6N022 2769 aa4.47□□□□□ -1.69
RTL9-201ENST00000465301 SPTBN5Q9NRC6 3674 aaKnown RBP4.47□□□□□ -1.69
RTL9-201ENST00000465301 AKAP13Q12802 2813 aa4.47□□□□□ -1.69
RTL9-201ENST00000465301 REV3LO60673 3130 aa4.45□□□□□ -1.7
RTL9-201ENST00000465301 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
RTL9-201ENST00000465301 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
RTL9-201ENST00000465301 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
RTL9-201ENST00000465301 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
RTL9-201ENST00000465301 XP32Q5T750 250 aa4.41□□□□□ -1.7
RTL9-201ENST00000465301 NSD1Q96L73 2696 aaPredicted RBP4.41□□□□□ -1.7
RTL9-201ENST00000465301 MAP1AP78559 2803 aaPredicted RBP4.4□□□□□ -1.7
RTL9-201ENST00000465301 P0C880 135 aa4.4□□□□□ -1.7
RTL9-201ENST00000465301 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
RTL9-201ENST00000465301 UBR5O95071 2799 aaPredicted RBP4.39□□□□□ -1.71
RTL9-201ENST00000465301 XIRP2A4UGR9 3374 aa4.39□□□□□ -1.71
RTL9-201ENST00000465301 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
RTL9-201ENST00000465301 LAMA3Q16787 3333 aa4.38□□□□□ -1.71
RTL9-201ENST00000465301 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
RTL9-201ENST00000465301 SZT2Q5T011 3432 aa4.37□□□□□ -1.71
RTL9-201ENST00000465301 RANBP2P49792 3224 aaKnown RBP4.37□□□□□ -1.71
RTL9-201ENST00000465301 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
RTL9-201ENST00000465301 DSPP15924 2871 aaKnown RBP4.37□□□□□ -1.71
RTL9-201ENST00000465301 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
RTL9-201ENST00000465301 KMT2BQ9UMN6 2715 aaPredicted RBP4.32□□□□□ -1.72
RTL9-201ENST00000465301 LAMA2P24043 3122 aaKnown RBP4.31□□□□□ -1.72
RTL9-201ENST00000465301 HIVEP1P15822 2718 aa4.29□□□□□ -1.72
RTL9-201ENST00000465301 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 340.2 ms