RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 Q8NBF4 154 aa7.93□□□□□ -1.14
SEMA3D-203ENST00000463315 RAB37Q96AX2 223 aa7.93□□□□□ -1.14
SEMA3D-203ENST00000463315 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 HSD52Q0P140 79 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 MOBPQ13875 183 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 C12orf57Q99622 126 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 LAMTOR3Q9UHA4 124 aa7.92□□□□□ -1.14
SEMA3D-203ENST00000463315 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
SEMA3D-203ENST00000463315 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
SEMA3D-203ENST00000463315 H0YGX0 51 aa7.88□□□□□ -1.15
SEMA3D-203ENST00000463315 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
SEMA3D-203ENST00000463315 LINC01547P58512 204 aaPredicted RBP7.88□□□□□ -1.15
SEMA3D-203ENST00000463315 PRR4Q16378 134 aa7.88□□□□□ -1.15
SEMA3D-203ENST00000463315 C9orf153Q5TBE3 101 aa7.88□□□□□ -1.15
SEMA3D-203ENST00000463315 SNCGO76070 127 aa7.87□□□□□ -1.15
SEMA3D-203ENST00000463315 FXYD2P54710 66 aa7.87□□□□□ -1.15
SEMA3D-203ENST00000463315 DEFB105AQ8NG35 78 aa7.87□□□□□ -1.15
SEMA3D-203ENST00000463315 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
SEMA3D-203ENST00000463315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.86□□□□□ -1.15
SEMA3D-203ENST00000463315 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
SEMA3D-203ENST00000463315 H7C2G1 150 aa7.85□□□□□ -1.15
SEMA3D-203ENST00000463315 Q8N377 158 aa7.85□□□□□ -1.15
SEMA3D-203ENST00000463315 LRP2P98164 4655 aa7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 CD164Q04900 197 aa7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 Q6ZQY7 126 aa7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
SEMA3D-203ENST00000463315 A0A1B0GX51 115 aa7.83□□□□□ -1.16
SEMA3D-203ENST00000463315 Q1RN00 199 aa7.83□□□□□ -1.16
SEMA3D-203ENST00000463315 UBR4Q5T4S7 5183 aa7.81□□□□□ -1.16
SEMA3D-203ENST00000463315 F8WEM9 126 aa7.79□□□□□ -1.16
SEMA3D-203ENST00000463315 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
SEMA3D-203ENST00000463315 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
SEMA3D-203ENST00000463315 LIMD2Q9BT23 127 aa7.79□□□□□ -1.16
SEMA3D-203ENST00000463315 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
SEMA3D-203ENST00000463315 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
SEMA3D-203ENST00000463315 COX6CP09669 75 aa7.78□□□□□ -1.16
SEMA3D-203ENST00000463315 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
SEMA3D-203ENST00000463315 TRIAP1O43715 76 aa7.77□□□□□ -1.17
SEMA3D-203ENST00000463315 Q5XG85 94 aa7.77□□□□□ -1.17
SEMA3D-203ENST00000463315 Q6JHZ5 121 aa7.77□□□□□ -1.17
SEMA3D-203ENST00000463315 M0R143 59 aa7.76□□□□□ -1.17
SEMA3D-203ENST00000463315 FAM218AQ96MZ4 157 aa7.76□□□□□ -1.17
SEMA3D-203ENST00000463315 H3BQ85 93 aa7.75□□□□□ -1.17
SEMA3D-203ENST00000463315 PSMB2P49721 201 aa7.75□□□□□ -1.17
SEMA3D-203ENST00000463315 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
SEMA3D-203ENST00000463315 TSTD3H0UI37 97 aa7.74□□□□□ -1.17
SEMA3D-203ENST00000463315 K7ERJ3 54 aa7.74□□□□□ -1.17
SEMA3D-203ENST00000463315 KRTAP4-2Q9BYR5 136 aa7.73□□□□□ -1.17
SEMA3D-203ENST00000463315 LPAP08519 4548 aa7.72□□□□□ -1.17
SEMA3D-203ENST00000463315 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
SEMA3D-203ENST00000463315 DNAL4O96015 105 aa7.7□□□□□ -1.18
SEMA3D-203ENST00000463315 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
SEMA3D-203ENST00000463315 NDUFV3P56181 108 aaKnown RBP7.69□□□□□ -1.18
SEMA3D-203ENST00000463315 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
SEMA3D-203ENST00000463315 CDIP1Q9H305 208 aa7.69□□□□□ -1.18
SEMA3D-203ENST00000463315 TCL1BO95988 128 aa7.68□□□□□ -1.18
SEMA3D-203ENST00000463315 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
SEMA3D-203ENST00000463315 IGFL1Q6UW32 110 aa7.68□□□□□ -1.18
SEMA3D-203ENST00000463315 ORMDL1Q9P0S3 153 aa7.68□□□□□ -1.18
SEMA3D-203ENST00000463315 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
SEMA3D-203ENST00000463315 TRACP01848 142 aa7.67□□□□□ -1.18
SEMA3D-203ENST00000463315 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
SEMA3D-203ENST00000463315 KRTAP4-11Q9BYQ6 195 aa7.67□□□□□ -1.18
SEMA3D-203ENST00000463315 SCGB1C2P0DMR2 95 aa7.66□□□□□ -1.18
SEMA3D-203ENST00000463315 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
SEMA3D-203ENST00000463315 Q6Q795 121 aa7.66□□□□□ -1.18
SEMA3D-203ENST00000463315 A0A0G2JQZ4 141 aa7.65□□□□□ -1.18
SEMA3D-203ENST00000463315 LST1O00453 97 aa7.65□□□□□ -1.18
SEMA3D-203ENST00000463315 FABP2P12104 132 aa7.65□□□□□ -1.18
SEMA3D-203ENST00000463315 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
SEMA3D-203ENST00000463315 H3BMG7 143 aa7.64□□□□□ -1.19
SEMA3D-203ENST00000463315 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
SEMA3D-203ENST00000463315 H3BUT2 72 aa7.62□□□□□ -1.19
SEMA3D-203ENST00000463315 UBE2V1Q13404 147 aa7.62□□□□□ -1.19
SEMA3D-203ENST00000463315 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
SEMA3D-203ENST00000463315 TEN1Q86WV5 123 aa7.62□□□□□ -1.19
SEMA3D-203ENST00000463315 LYRM7Q5U5X0 104 aa7.6□□□□□ -1.19
SEMA3D-203ENST00000463315 SS18L2Q9UHA2 77 aa7.59□□□□□ -1.19
SEMA3D-203ENST00000463315 ATXN8Q156A1 80 aa7.57□□□□□ -1.2
SEMA3D-203ENST00000463315 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
SEMA3D-203ENST00000463315 ANKRD29Q8N6D5 301 aa7.56□□□□□ -1.2
SEMA3D-203ENST00000463315 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
SEMA3D-203ENST00000463315 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
SEMA3D-203ENST00000463315 BATFQ16520 125 aa7.54□□□□□ -1.2
SEMA3D-203ENST00000463315 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
SEMA3D-203ENST00000463315 A0A1W2PNM2 257 aa7.52□□□□□ -1.21
SEMA3D-203ENST00000463315 RBM3P98179 157 aaKnown RBP7.52□□□□□ -1.21
SEMA3D-203ENST00000463315 A0A087WSZ3 146 aa7.51□□□□□ -1.21
SEMA3D-203ENST00000463315 C9orf118A6NHY6 69 aa7.51□□□□□ -1.21
SEMA3D-203ENST00000463315 NAA38Q9BRA0 125 aaKnown RBP7.51□□□□□ -1.21
SEMA3D-203ENST00000463315 MUC2Q02817 5179 aa7.5□□□□□ -1.21
SEMA3D-203ENST00000463315 C21orf62-AS1Q17RA5 79 aa7.5□□□□□ -1.21
SEMA3D-203ENST00000463315 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
SEMA3D-203ENST00000463315 CCKP06307 115 aa7.49□□□□□ -1.21
SEMA3D-203ENST00000463315 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
SEMA3D-203ENST00000463315 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
SEMA3D-203ENST00000463315 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms