RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PKHD1L1Q86WI1 4243 aa3.75□□□□□ -1.81
SF3B1-206ENST00000462613 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
SF3B1-206ENST00000462613 SPINK1P00995 79 aa3.74□□□□□ -1.81
SF3B1-206ENST00000462613 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
SF3B1-206ENST00000462613 FABP2P12104 132 aa3.73□□□□□ -1.81
SF3B1-206ENST00000462613 Q6JHZ5 121 aa3.73□□□□□ -1.81
SF3B1-206ENST00000462613 Q8N377 158 aa3.73□□□□□ -1.81
SF3B1-206ENST00000462613 CLEC2BQ92478 149 aa3.73□□□□□ -1.81
SF3B1-206ENST00000462613 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
SF3B1-206ENST00000462613 TMEM256-PLSCR3K7ERE1 68 aa3.72□□□□□ -1.81
SF3B1-206ENST00000462613 TRACP01848 142 aa3.72□□□□□ -1.81
SF3B1-206ENST00000462613 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-206ENST00000462613 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
SF3B1-206ENST00000462613 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
SF3B1-206ENST00000462613 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
SF3B1-206ENST00000462613 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
SF3B1-206ENST00000462613 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
SF3B1-206ENST00000462613 LST1O00453 97 aa3.71□□□□□ -1.82
SF3B1-206ENST00000462613 NDUFV3P56181 108 aaKnown RBP3.71□□□□□ -1.82
SF3B1-206ENST00000462613 CD164Q04900 197 aa3.71□□□□□ -1.82
SF3B1-206ENST00000462613 PCP4L1A6NKN8 68 aa3.7□□□□□ -1.82
SF3B1-206ENST00000462613 H3BUT2 72 aa3.7□□□□□ -1.82
SF3B1-206ENST00000462613 PRR4Q16378 134 aa3.7□□□□□ -1.82
SF3B1-206ENST00000462613 COL5A1-AS1Q5SY13 56 aa3.7□□□□□ -1.82
SF3B1-206ENST00000462613 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
SF3B1-206ENST00000462613 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
SF3B1-206ENST00000462613 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
SF3B1-206ENST00000462613 H3BMG7 143 aa3.69□□□□□ -1.82
SF3B1-206ENST00000462613 HRCT1Q6UXD1 115 aa3.69□□□□□ -1.82
SF3B1-206ENST00000462613 NAA38Q9BRA0 125 aaKnown RBP3.69□□□□□ -1.82
SF3B1-206ENST00000462613 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
SF3B1-206ENST00000462613 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
SF3B1-206ENST00000462613 TCL1BO95988 128 aa3.68□□□□□ -1.82
SF3B1-206ENST00000462613 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
SF3B1-206ENST00000462613 A0A1W2PPM0 123 aa3.67□□□□□ -1.82
SF3B1-206ENST00000462613 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
SF3B1-206ENST00000462613 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
SF3B1-206ENST00000462613 FP248Q71RG6 208 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-206ENST00000462613 ANKRD29Q8N6D5 301 aa3.67□□□□□ -1.82
SF3B1-206ENST00000462613 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
SF3B1-206ENST00000462613 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
SF3B1-206ENST00000462613 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
SF3B1-206ENST00000462613 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
SF3B1-206ENST00000462613 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
SF3B1-206ENST00000462613 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
SF3B1-206ENST00000462613 C9JAW5 83 aa3.65□□□□□ -1.83
SF3B1-206ENST00000462613 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.83
SF3B1-206ENST00000462613 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
SF3B1-206ENST00000462613 C21orf62-AS1Q17RA5 79 aa3.65□□□□□ -1.83
SF3B1-206ENST00000462613 SPCS1Q9Y6A9 102 aa3.65□□□□□ -1.83
SF3B1-206ENST00000462613 TRBV7-7A0A0K0K1E9 115 aa3.64□□□□□ -1.83
SF3B1-206ENST00000462613 A0A1B0GV72 72 aa3.64□□□□□ -1.83
SF3B1-206ENST00000462613 Q5XG85 94 aa3.64□□□□□ -1.83
SF3B1-206ENST00000462613 A0A0G2JQZ4 141 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 H3BT86 120 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 CCKP06307 115 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 PDE6GP18545 87 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 Q6Q795 121 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 GTF2H5Q6ZYL4 71 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 VPS25Q9BRG1 176 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 CDIP1Q9H305 208 aa3.63□□□□□ -1.83
SF3B1-206ENST00000462613 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
SF3B1-206ENST00000462613 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
SF3B1-206ENST00000462613 TNXBP22105 4242 aa3.62□□□□□ -1.83
SF3B1-206ENST00000462613 A0A087WSZ3 146 aa3.61□□□□□ -1.83
SF3B1-206ENST00000462613 ASB16-AS1Q495Z4 193 aa3.61□□□□□ -1.83
SF3B1-206ENST00000462613 A0A1B0GW54 56 aa3.6□□□□□ -1.83
SF3B1-206ENST00000462613 K7EP34 96 aa3.6□□□□□ -1.83
SF3B1-206ENST00000462613 A0A1W2PNM2 257 aa3.59□□□□□ -1.83
SF3B1-206ENST00000462613 C1orf195Q5TG92 126 aa3.59□□□□□ -1.83
SF3B1-206ENST00000462613 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
SF3B1-206ENST00000462613 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
SF3B1-206ENST00000462613 C14orf132Q9NPU4 83 aa3.58□□□□□ -1.84
SF3B1-206ENST00000462613 HERC1Q15751 4861 aa3.57□□□□□ -1.84
SF3B1-206ENST00000462613 Q6ZQT0 140 aa3.57□□□□□ -1.84
SF3B1-206ENST00000462613 SIGMAR1Q99720 223 aa3.57□□□□□ -1.84
SF3B1-206ENST00000462613 F8W1H4 67 aa3.56□□□□□ -1.84
SF3B1-206ENST00000462613 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
SF3B1-206ENST00000462613 OBSCN-AS1Q96MR7 158 aa3.56□□□□□ -1.84
SF3B1-206ENST00000462613 J3KT08 172 aa3.55□□□□□ -1.84
SF3B1-206ENST00000462613 IGKV4-1P06312 121 aa3.55□□□□□ -1.84
SF3B1-206ENST00000462613 C9orf92A6NGG3 77 aa3.54□□□□□ -1.84
SF3B1-206ENST00000462613 NDUFB1O75438 58 aa3.54□□□□□ -1.84
SF3B1-206ENST00000462613 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
SF3B1-206ENST00000462613 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
SF3B1-206ENST00000462613 NREPQ16612 68 aa3.53□□□□□ -1.84
SF3B1-206ENST00000462613 PRO0461Q9UI25 63 aa3.52□□□□□ -1.85
SF3B1-206ENST00000462613 SMCPP49901 116 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-206ENST00000462613 XP32Q5T750 250 aa3.51□□□□□ -1.85
SF3B1-206ENST00000462613 Q96NJ1 140 aa3.51□□□□□ -1.85
SF3B1-206ENST00000462613 LINC00472Q9H8W2 130 aa3.51□□□□□ -1.85
SF3B1-206ENST00000462613 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
SF3B1-206ENST00000462613 LINC00313P59037 77 aa3.5□□□□□ -1.85
SF3B1-206ENST00000462613 DEFB116Q30KQ4 102 aa3.5□□□□□ -1.85
SF3B1-206ENST00000462613 ETDBQ3ZM63 59 aa3.5□□□□□ -1.85
SF3B1-206ENST00000462613 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
SF3B1-206ENST00000462613 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
SF3B1-206ENST00000462613 A0A0U1RQV1 116 aa3.49□□□□□ -1.85
SF3B1-206ENST00000462613 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
SF3B1-206ENST00000462613 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms