RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 NOTCH2Q04721 2471 aa5.79□□□□□ -1.48
LINC01140-201ENST00000461990 DEFB131BA0A096LNP1 70 aa5.79□□□□□ -1.48
LINC01140-201ENST00000461990 IGLV1-51P01701 117 aa5.79□□□□□ -1.48
LINC01140-201ENST00000461990 MTORP42345 2549 aa5.79□□□□□ -1.48
LINC01140-201ENST00000461990 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
LINC01140-201ENST00000461990 Q6ZR54 194 aa5.78□□□□□ -1.48
LINC01140-201ENST00000461990 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
LINC01140-201ENST00000461990 RPL37AP61513 92 aaKnown RBP5.77□□□□□ -1.49
LINC01140-201ENST00000461990 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
LINC01140-201ENST00000461990 FBN2P35556 2912 aa5.77□□□□□ -1.49
LINC01140-201ENST00000461990 C15orf56Q8N910 161 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 X6R8D5 127 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 H0Y9J4 135 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 RETNLBQ9BQ08 111 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 ACANP16112 2415 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 NF1P21359 2839 aa5.76□□□□□ -1.49
LINC01140-201ENST00000461990 A0A087WSZ3 146 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 MAST4O15021 2626 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 PDZD2O15018 2839 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 ANKRD17O75179 2603 aaKnown RBP5.75□□□□□ -1.49
LINC01140-201ENST00000461990 CCL19Q99731 98 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 LINC00472Q9H8W2 130 aa5.75□□□□□ -1.49
LINC01140-201ENST00000461990 MAPK1IP1LQ8NDC0 245 aa5.74□□□□□ -1.49
LINC01140-201ENST00000461990 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
LINC01140-201ENST00000461990 APCP25054 2843 aa5.74□□□□□ -1.49
LINC01140-201ENST00000461990 FN1P02751 2386 aaKnown RBP5.74□□□□□ -1.49
LINC01140-201ENST00000461990 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
LINC01140-201ENST00000461990 IGKV2-24A0A0C4DH68 120 aa5.73□□□□□ -1.49
LINC01140-201ENST00000461990 TEX15Q9BXT5 2789 aa5.73□□□□□ -1.49
LINC01140-201ENST00000461990 ITPR2Q14571 2701 aa5.72□□□□□ -1.49
LINC01140-201ENST00000461990 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
LINC01140-201ENST00000461990 KRTAP10-9P60411 292 aa5.72□□□□□ -1.49
LINC01140-201ENST00000461990 NIPBLQ6KC79 2804 aaeCLIP5.72□□□□□ -1.49
LINC01140-201ENST00000461990 MXRA5Q9NR99 2828 aa5.72□□□□□ -1.49
LINC01140-201ENST00000461990 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.49
LINC01140-201ENST00000461990 CSAG1Q6PB30 78 aa5.71□□□□□ -1.5
LINC01140-201ENST00000461990 DEFB113Q30KQ7 82 aa5.7□□□□□ -1.5
LINC01140-201ENST00000461990 J3QL48 77 aa5.69□□□□□ -1.5
LINC01140-201ENST00000461990 HIVEP2P31629 2446 aa5.69□□□□□ -1.5
LINC01140-201ENST00000461990 A0A0G2JQZ4 141 aa5.69□□□□□ -1.5
LINC01140-201ENST00000461990 A0A1W2PNN7 141 aa5.69□□□□□ -1.5
LINC01140-201ENST00000461990 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
LINC01140-201ENST00000461990 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
LINC01140-201ENST00000461990 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
LINC01140-201ENST00000461990 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
LINC01140-201ENST00000461990 NBEAL2Q6ZNJ1 2754 aa5.65□□□□□ -1.51
LINC01140-201ENST00000461990 REG3GQ6UW15 175 aa5.64□□□□□ -1.51
LINC01140-201ENST00000461990 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
LINC01140-201ENST00000461990 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
LINC01140-201ENST00000461990 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
LINC01140-201ENST00000461990 SPRR1BP22528 89 aa5.63□□□□□ -1.51
LINC01140-201ENST00000461990 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
LINC01140-201ENST00000461990 ACYP2P14621 99 aa5.63□□□□□ -1.51
LINC01140-201ENST00000461990 A0A1B0GU69 56 aa5.62□□□□□ -1.51
LINC01140-201ENST00000461990 UQCR11O14957 56 aa5.62□□□□□ -1.51
LINC01140-201ENST00000461990 ROMO1P60602 79 aa5.62□□□□□ -1.51
LINC01140-201ENST00000461990 ZNF861PO60384 105 aa5.62□□□□□ -1.51
LINC01140-201ENST00000461990 IGHV6-1A0A0B4J1U7 121 aa5.61□□□□□ -1.51
LINC01140-201ENST00000461990 FLNAP21333 2647 aaKnown RBP5.6□□□□□ -1.51
LINC01140-201ENST00000461990 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
LINC01140-201ENST00000461990 Q96NJ1 140 aa5.59□□□□□ -1.51
LINC01140-201ENST00000461990 H3BNG1 76 aa5.59□□□□□ -1.52
LINC01140-201ENST00000461990 HIVEP1P15822 2718 aa5.58□□□□□ -1.52
LINC01140-201ENST00000461990 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
LINC01140-201ENST00000461990 F8P00451 2351 aa5.58□□□□□ -1.52
LINC01140-201ENST00000461990 SPART-AS1P0CW21 52 aa5.57□□□□□ -1.52
LINC01140-201ENST00000461990 TENM2Q9NT68 2774 aa5.57□□□□□ -1.52
LINC01140-201ENST00000461990 ITPR3Q14573 2671 aa5.57□□□□□ -1.52
LINC01140-201ENST00000461990 DEFB4AO15263 64 aa5.57□□□□□ -1.52
LINC01140-201ENST00000461990 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
LINC01140-201ENST00000461990 KRTAP1-1Q07627 177 aa5.56□□□□□ -1.52
LINC01140-201ENST00000461990 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
LINC01140-201ENST00000461990 MRPL34Q9BQ48 92 aaKnown RBP5.55□□□□□ -1.52
LINC01140-201ENST00000461990 LINC01556Q5JQF7 62 aa5.55□□□□□ -1.52
LINC01140-201ENST00000461990 DEFB135Q30KP9 77 aa5.54□□□□□ -1.52
LINC01140-201ENST00000461990 HTN3P15516 51 aa5.53□□□□□ -1.52
LINC01140-201ENST00000461990 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
LINC01140-201ENST00000461990 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
LINC01140-201ENST00000461990 PRLHP81277 87 aa5.52□□□□□ -1.53
LINC01140-201ENST00000461990 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
LINC01140-201ENST00000461990 ZNF469Q96JG9 3925 aaPredicted RBP5.51□□□□□ -1.53
LINC01140-201ENST00000461990 NSD1Q96L73 2696 aaPredicted RBP5.5□□□□□ -1.53
LINC01140-201ENST00000461990 SMR3AQ99954 134 aa5.5□□□□□ -1.53
LINC01140-201ENST00000461990 INAFM1C9JVW0 142 aa5.48□□□□□ -1.53
LINC01140-201ENST00000461990 LCE2BO14633 110 aa5.48□□□□□ -1.53
LINC01140-201ENST00000461990 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
LINC01140-201ENST00000461990 Q5W150 140 aa5.47□□□□□ -1.53
LINC01140-201ENST00000461990 TEP1Q99973 2627 aaKnown RBP5.47□□□□□ -1.53
LINC01140-201ENST00000461990 A8MUU9 505 aa5.46□□□□□ -1.54
LINC01140-201ENST00000461990 P0C880 135 aa5.46□□□□□ -1.54
LINC01140-201ENST00000461990 IGLV5-52A0A0A0MRZ9 124 aa5.46□□□□□ -1.54
LINC01140-201ENST00000461990 DNAH10OSP0CZ25 163 aa5.46□□□□□ -1.54
LINC01140-201ENST00000461990 K7EIL1 84 aa5.45□□□□□ -1.54
LINC01140-201ENST00000461990 ATRQ13535 2644 aa5.45□□□□□ -1.54
LINC01140-201ENST00000461990 VWFP04275 2813 aa5.43□□□□□ -1.54
LINC01140-201ENST00000461990 DNAH1Q9P2D7 4330 aa5.42□□□□□ -1.54
LINC01140-201ENST00000461990 CDK2AP2O75956 126 aa5.41□□□□□ -1.54
LINC01140-201ENST00000461990 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
LINC01140-201ENST00000461990 CASC10Q5T4H9 136 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms