RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
COL5A3-202ENST00000461214 A0A1W2PPM0 123 aa8.57□□□□□ -1.04
COL5A3-202ENST00000461214 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
COL5A3-202ENST00000461214 KRTAP9-2Q9BYQ4 174 aa8.57□□□□□ -1.04
COL5A3-202ENST00000461214 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
COL5A3-202ENST00000461214 CRYGAP11844 174 aa8.56□□□□□ -1.04
COL5A3-202ENST00000461214 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
COL5A3-202ENST00000461214 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
COL5A3-202ENST00000461214 H3BQ85 93 aa8.55□□□□□ -1.04
COL5A3-202ENST00000461214 FABP2P12104 132 aa8.55□□□□□ -1.04
COL5A3-202ENST00000461214 TCL1BO95988 128 aa8.54□□□□□ -1.04
COL5A3-202ENST00000461214 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
COL5A3-202ENST00000461214 A0A087X002 238 aa8.53□□□□□ -1.04
COL5A3-202ENST00000461214 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
COL5A3-202ENST00000461214 ORMDL1Q9P0S3 153 aa8.53□□□□□ -1.04
COL5A3-202ENST00000461214 Q8N377 158 aa8.52□□□□□ -1.05
COL5A3-202ENST00000461214 LAMTOR3Q9UHA4 124 aa8.52□□□□□ -1.05
COL5A3-202ENST00000461214 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
COL5A3-202ENST00000461214 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
COL5A3-202ENST00000461214 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
COL5A3-202ENST00000461214 Q8NBF4 154 aa8.5□□□□□ -1.05
COL5A3-202ENST00000461214 KRTAP9-6A0A140TA67 174 aa8.49□□□□□ -1.05
COL5A3-202ENST00000461214 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
COL5A3-202ENST00000461214 F8WEM9 126 aa8.48□□□□□ -1.05
COL5A3-202ENST00000461214 TMEM256-PLSCR3K7ERE1 68 aa8.48□□□□□ -1.05
COL5A3-202ENST00000461214 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
COL5A3-202ENST00000461214 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
COL5A3-202ENST00000461214 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
COL5A3-202ENST00000461214 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
COL5A3-202ENST00000461214 C9orf153Q5TBE3 101 aa8.47□□□□□ -1.05
COL5A3-202ENST00000461214 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
COL5A3-202ENST00000461214 MOBPQ13875 183 aa8.46□□□□□ -1.06
COL5A3-202ENST00000461214 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
COL5A3-202ENST00000461214 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
COL5A3-202ENST00000461214 K7EP34 96 aa8.44□□□□□ -1.06
COL5A3-202ENST00000461214 NDUFV3P56181 108 aaKnown RBP8.44□□□□□ -1.06
COL5A3-202ENST00000461214 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
COL5A3-202ENST00000461214 TNXBP22105 4242 aa8.44□□□□□ -1.06
COL5A3-202ENST00000461214 C9JAW5 83 aa8.43□□□□□ -1.06
COL5A3-202ENST00000461214 H3BMG7 143 aa8.43□□□□□ -1.06
COL5A3-202ENST00000461214 H3BT86 120 aa8.42□□□□□ -1.06
COL5A3-202ENST00000461214 Q6JHZ5 121 aa8.42□□□□□ -1.06
COL5A3-202ENST00000461214 GTF2H5Q6ZYL4 71 aa8.42□□□□□ -1.06
COL5A3-202ENST00000461214 BAALC-AS2P0C853 105 aa8.41□□□□□ -1.06
COL5A3-202ENST00000461214 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
COL5A3-202ENST00000461214 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
COL5A3-202ENST00000461214 ANKRD29Q8N6D5 301 aa8.39□□□□□ -1.07
COL5A3-202ENST00000461214 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
COL5A3-202ENST00000461214 CD164Q04900 197 aa8.36□□□□□ -1.07
COL5A3-202ENST00000461214 JMJD7-PLA2G4BH0Y9G9 81 aa8.35□□□□□ -1.07
COL5A3-202ENST00000461214 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
COL5A3-202ENST00000461214 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
COL5A3-202ENST00000461214 SPINK1P00995 79 aa8.34□□□□□ -1.07
COL5A3-202ENST00000461214 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
COL5A3-202ENST00000461214 RBM3P98179 157 aaKnown RBP8.33□□□□□ -1.08
COL5A3-202ENST00000461214 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
COL5A3-202ENST00000461214 TRBV7-4A0A0J9YYF1 115 aa8.31□□□□□ -1.08
COL5A3-202ENST00000461214 Q6Q795 121 aa8.31□□□□□ -1.08
COL5A3-202ENST00000461214 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
COL5A3-202ENST00000461214 F8W1H4 67 aa8.3□□□□□ -1.08
COL5A3-202ENST00000461214 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
COL5A3-202ENST00000461214 OBSCN-AS1Q96MR7 158 aa8.3□□□□□ -1.08
COL5A3-202ENST00000461214 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
COL5A3-202ENST00000461214 A0A1B0GV72 72 aa8.29□□□□□ -1.08
COL5A3-202ENST00000461214 A0A1B0GV90 55 aa8.29□□□□□ -1.08
COL5A3-202ENST00000461214 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
COL5A3-202ENST00000461214 TEN1Q86WV5 123 aa8.29□□□□□ -1.08
COL5A3-202ENST00000461214 PDE6GP18545 87 aa8.28□□□□□ -1.08
COL5A3-202ENST00000461214 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
COL5A3-202ENST00000461214 A0A0G2JQZ4 141 aa8.27□□□□□ -1.09
COL5A3-202ENST00000461214 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
COL5A3-202ENST00000461214 Q5XG85 94 aa8.26□□□□□ -1.09
COL5A3-202ENST00000461214 CCKP06307 115 aa8.25□□□□□ -1.09
COL5A3-202ENST00000461214 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
COL5A3-202ENST00000461214 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
COL5A3-202ENST00000461214 Q6ZQT0 140 aa8.24□□□□□ -1.09
COL5A3-202ENST00000461214 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
COL5A3-202ENST00000461214 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
COL5A3-202ENST00000461214 SS18L2Q9UHA2 77 aa8.23□□□□□ -1.09
COL5A3-202ENST00000461214 A0A1B0GW54 56 aa8.22□□□□□ -1.09
COL5A3-202ENST00000461214 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
COL5A3-202ENST00000461214 LPAP08519 4548 aa8.21□□□□□ -1.1
COL5A3-202ENST00000461214 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
COL5A3-202ENST00000461214 VPS25Q9BRG1 176 aa8.19□□□□□ -1.1
COL5A3-202ENST00000461214 A0A087WSZ3 146 aa8.18□□□□□ -1.1
COL5A3-202ENST00000461214 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
COL5A3-202ENST00000461214 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
COL5A3-202ENST00000461214 MUC2Q02817 5179 aa8.15□□□□□ -1.1
COL5A3-202ENST00000461214 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
COL5A3-202ENST00000461214 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
COL5A3-202ENST00000461214 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
COL5A3-202ENST00000461214 PRR4Q16378 134 aa8.09□□□□□ -1.11
COL5A3-202ENST00000461214 Q96NJ1 140 aa8.08□□□□□ -1.12
COL5A3-202ENST00000461214 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
COL5A3-202ENST00000461214 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
COL5A3-202ENST00000461214 FAM240AA0A1B0GVK7 77 aa8.04□□□□□ -1.12
COL5A3-202ENST00000461214 J3KT08 172 aa8.04□□□□□ -1.12
COL5A3-202ENST00000461214 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
COL5A3-202ENST00000461214 ACYP1P07311 99 aa8.02□□□□□ -1.13
COL5A3-202ENST00000461214 NREPQ16612 68 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms