RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SNURFQ9Y675 71 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 ZANQ9Y493 2812 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 RIF1Q5UIP0 2472 aaKnown RBP1.46□□□□□ -2.18
HPS3-203ENST00000460822 CHD6Q8TD26 2715 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 TRAV10A0A0B4J240 114 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 TRBV7-4A0A0J9YYF1 115 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 M0R2N4 97 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 DEFB131AP59861 70 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 LINC00474Q9P2X8 69 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 WNK1Q9H4A3 2382 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 SETXQ7Z333 2677 aaKnown RBP1.45□□□□□ -2.18
HPS3-203ENST00000460822 APCP25054 2843 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 ITPR1Q14643 2758 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 CACNA1AO00555 2505 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 TTC28Q96AY4 2481 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 LOC110117498A0A087WWA1 95 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 IGKV3OR2-268A0A0C4DH90 116 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 NDUFC1O43677 76 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 RBM3P98179 157 aaKnown RBP1.45□□□□□ -2.18
HPS3-203ENST00000460822 TPRXLQ17RH7 258 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 RETNLBQ9BQ08 111 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 UNC79Q9P2D8 2635 aa1.45□□□□□ -2.18
HPS3-203ENST00000460822 NIPBLQ6KC79 2804 aaeCLIP1.44□□□□□ -2.18
HPS3-203ENST00000460822 JMJD1CQ15652 2540 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 TLN2Q9Y4G6 2542 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 FBN2P35556 2912 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 MIFP14174 115 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 HAMPP81172 84 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 DIRC1Q969H9 104 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 SPG11Q96JI7 2443 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 MYO9AB2RTY4 2548 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 PTPN13Q12923 2485 aa1.44□□□□□ -2.18
HPS3-203ENST00000460822 NCOR2Q9Y618 2525 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 B4DSR2 109 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 ERC2-IT1O76042 136 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 KRTAP10-10P60014 251 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 ROMO1P60602 79 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 NREPQ16612 68 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 DEFB136Q30KP8 78 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 Q8IZM0 81 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 TMEM254Q8TBM7 123 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 IGF2RP11717 2491 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
HPS3-203ENST00000460822 ZFHX2Q9C0A1 2572 aaPredicted RBP1.43□□□□□ -2.18
HPS3-203ENST00000460822 ZNF469Q96JG9 3925 aaPredicted RBP1.43□□□□□ -2.18
HPS3-203ENST00000460822 TRBV6-8A0A0A6YYG3 113 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 TRGV4A0A0C4DH28 118 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 LINC00959A0A1B0GUT2 108 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 PDE6GP18545 87 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 DEFB123Q8N688 67 aa1.43□□□□□ -2.18
HPS3-203ENST00000460822 ANK3Q12955 4377 aaKnown RBP1.43□□□□□ -2.18
HPS3-203ENST00000460822 UTP20O75691 2785 aaKnown RBP1.42□□□□□ -2.18
HPS3-203ENST00000460822 NF1P21359 2839 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 IGLV1-51P01701 117 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 COX17Q14061 63 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 DEFB112Q30KQ8 113 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 C1orf134Q5TEV5 83 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 Q6ZQY7 126 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 SPACA4Q8TDM5 124 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 NOP10Q9NPE3 64 aaKnown RBP1.42□□□□□ -2.18
HPS3-203ENST00000460822 CFAP46Q8IYW2 2715 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 GCN1Q92616 2671 aaKnown RBP1.42□□□□□ -2.18
HPS3-203ENST00000460822 TEX15Q9BXT5 2789 aa1.42□□□□□ -2.18
HPS3-203ENST00000460822 LRRK2Q5S007 2527 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 TRGV2A0A075B6R0 118 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 DEFB114Q30KQ6 69 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 C9orf116Q5BN46 136 aaPredicted RBP1.41□□□□□ -2.18
HPS3-203ENST00000460822 CLPSL2Q6UWE3 100 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 DYNLRB2Q8TF09 96 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 USP9YO00507 2555 aaPredicted RBP1.41□□□□□ -2.18
HPS3-203ENST00000460822 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 FLNCQ14315 2725 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 hDV103S1A0JD37 113 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 COX7BP24311 80 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 Q1T7F1 81 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 DEFB113Q30KQ7 82 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.41□□□□□ -2.18
HPS3-203ENST00000460822 C4orf3Q8WVX3 66 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 CCL19Q99731 98 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 FN1P02751 2386 aaKnown RBP1.41□□□□□ -2.18
HPS3-203ENST00000460822 EPG5Q9HCE0 2579 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 NBEAL2Q6ZNJ1 2754 aa1.41□□□□□ -2.18
HPS3-203ENST00000460822 USP9XQ93008 2570 aaPredicted RBP1.4□□□□□ -2.18
HPS3-203ENST00000460822 LCE6AA0A183 80 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 PRB1P04280 392 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 CENPEQ02224 2701 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 ZFYVE26Q68DK2 2539 aa1.4□□□□□ -2.19
HPS3-203ENST00000460822 ELOF1P60002 83 aaKnown RBP1.39□□□□□ -2.19
HPS3-203ENST00000460822 SPAG11BQ08648 103 aa1.39□□□□□ -2.19
HPS3-203ENST00000460822 UNQ6190/PRO20217Q6UXQ8 127 aa1.39□□□□□ -2.19
HPS3-203ENST00000460822 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
HPS3-203ENST00000460822 WFDC10AQ9H1F0 79 aa1.39□□□□□ -2.19
HPS3-203ENST00000460822 CHD8Q9HCK8 2581 aa1.39□□□□□ -2.19
HPS3-203ENST00000460822 POLQO75417 2590 aa1.39□□□□□ -2.19
HPS3-203ENST00000460822 SETD2Q9BYW2 2564 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms