RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 Q8N377 158 aa12.43□□□□□ -0.42
SSNA1-202ENST00000459860 PRO1933Q9H354 126 aa12.43□□□□□ -0.42
SSNA1-202ENST00000459860 F8WEM9 126 aa12.42□□□□□ -0.42
SSNA1-202ENST00000459860 IGLV7-46A0A075B6I9 117 aa12.38□□□□□ -0.43
SSNA1-202ENST00000459860 FP248Q71RG6 208 aaPredicted RBP12.38□□□□□ -0.43
SSNA1-202ENST00000459860 PPDPFLQ8WWR9 84 aa12.38□□□□□ -0.43
SSNA1-202ENST00000459860 HRCT1Q6UXD1 115 aa12.37□□□□□ -0.43
SSNA1-202ENST00000459860 LIMD2Q9BT23 127 aa12.37□□□□□ -0.43
SSNA1-202ENST00000459860 K7ERJ3 54 aa12.36□□□□□ -0.43
SSNA1-202ENST00000459860 PSMB2P49721 201 aa12.35□□□□□ -0.43
SSNA1-202ENST00000459860 CD164Q04900 197 aa12.35□□□□□ -0.43
SSNA1-202ENST00000459860 OCIAD2Q56VL3 154 aa12.35□□□□□ -0.43
SSNA1-202ENST00000459860 A0A1B0GX51 115 aa12.34□□□□□ -0.43
SSNA1-202ENST00000459860 TRIAP1O43715 76 aa12.34□□□□□ -0.43
SSNA1-202ENST00000459860 GHRHP01286 108 aa12.32□□□□□ -0.44
SSNA1-202ENST00000459860 COX6CP09669 75 aa12.32□□□□□ -0.44
SSNA1-202ENST00000459860 FAM218AQ96MZ4 157 aa12.32□□□□□ -0.44
SSNA1-202ENST00000459860 SNHG12Q9BXW3 62 aa12.32□□□□□ -0.44
SSNA1-202ENST00000459860 TPRXLQ17RH7 258 aa12.31□□□□□ -0.44
SSNA1-202ENST00000459860 M0R143 59 aa12.29□□□□□ -0.44
SSNA1-202ENST00000459860 TSTD3H0UI37 97 aa12.28□□□□□ -0.44
SSNA1-202ENST00000459860 Q6JHZ5 121 aa12.28□□□□□ -0.44
SSNA1-202ENST00000459860 CDIP1Q9H305 208 aa12.28□□□□□ -0.44
SSNA1-202ENST00000459860 LOC105371267A0A1B0GV96 52 aa12.27□□□□□ -0.45
SSNA1-202ENST00000459860 DNAL4O96015 105 aa12.26□□□□□ -0.45
SSNA1-202ENST00000459860 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
SSNA1-202ENST00000459860 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
SSNA1-202ENST00000459860 A0A0G2JQZ4 141 aa12.24□□□□□ -0.45
SSNA1-202ENST00000459860 SCGB1C2P0DMR2 95 aa12.2□□□□□ -0.46
SSNA1-202ENST00000459860 FABP2P12104 132 aa12.2□□□□□ -0.46
SSNA1-202ENST00000459860 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
SSNA1-202ENST00000459860 NDUFV3P56181 108 aaKnown RBP12.19□□□□□ -0.46
SSNA1-202ENST00000459860 Q5XG85 94 aa12.19□□□□□ -0.46
SSNA1-202ENST00000459860 H3BQ85 93 aa12.18□□□□□ -0.46
SSNA1-202ENST00000459860 TCL1BO95988 128 aa12.18□□□□□ -0.46
SSNA1-202ENST00000459860 ORMDL1Q9P0S3 153 aa12.18□□□□□ -0.46
SSNA1-202ENST00000459860 H3BUT2 72 aa12.17□□□□□ -0.46
SSNA1-202ENST00000459860 KRTAP13-3Q3SY46 172 aa12.17□□□□□ -0.46
SSNA1-202ENST00000459860 FAT4Q6V0I7 4981 aa12.15□□□□□ -0.46
SSNA1-202ENST00000459860 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
SSNA1-202ENST00000459860 H3BMG7 143 aa12.12□□□□□ -0.47
SSNA1-202ENST00000459860 TMEM256-PLSCR3K7ERE1 68 aa12.11□□□□□ -0.47
SSNA1-202ENST00000459860 TRACP01848 142 aa12.11□□□□□ -0.47
SSNA1-202ENST00000459860 KRTAP9-2Q9BYQ4 174 aa12.11□□□□□ -0.47
SSNA1-202ENST00000459860 LST1O00453 97 aa12.1□□□□□ -0.47
SSNA1-202ENST00000459860 BATFQ16520 125 aa12.09□□□□□ -0.47
SSNA1-202ENST00000459860 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
SSNA1-202ENST00000459860 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
SSNA1-202ENST00000459860 A0A0U1RQV1 116 aa12.08□□□□□ -0.48
SSNA1-202ENST00000459860 C1orf195Q5TG92 126 aa12.08□□□□□ -0.48
SSNA1-202ENST00000459860 ASB16-AS1Q495Z4 193 aa12.05□□□□□ -0.48
SSNA1-202ENST00000459860 Q6Q795 121 aa12.05□□□□□ -0.48
SSNA1-202ENST00000459860 TEN1Q86WV5 123 aa12.05□□□□□ -0.48
SSNA1-202ENST00000459860 NAA38Q9BRA0 125 aaKnown RBP12.04□□□□□ -0.48
SSNA1-202ENST00000459860 SS18L2Q9UHA2 77 aa12.04□□□□□ -0.48
SSNA1-202ENST00000459860 LYRM7Q5U5X0 104 aa12.03□□□□□ -0.48
SSNA1-202ENST00000459860 UBE2V1Q13404 147 aa12.02□□□□□ -0.49
SSNA1-202ENST00000459860 ATXN8Q156A1 80 aa12.02□□□□□ -0.49
SSNA1-202ENST00000459860 A0A1B0GV72 72 aa12.01□□□□□ -0.49
SSNA1-202ENST00000459860 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
SSNA1-202ENST00000459860 C9orf92A6NGG3 77 aa11.98□□□□□ -0.49
SSNA1-202ENST00000459860 XP32Q5T750 250 aa11.97□□□□□ -0.49
SSNA1-202ENST00000459860 SEC61BP60468 96 aaKnown RBP11.96□□□□□ -0.49
SSNA1-202ENST00000459860 A0A087WSZ3 146 aa11.95□□□□□ -0.5
SSNA1-202ENST00000459860 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
SSNA1-202ENST00000459860 TRBV20-1A0A075B6N2 111 aa11.92□□□□□ -0.5
SSNA1-202ENST00000459860 A0A1W2PNM2 257 aa11.92□□□□□ -0.5
SSNA1-202ENST00000459860 TRBV7-4A0A0J9YYF1 115 aa11.91□□□□□ -0.5
SSNA1-202ENST00000459860 RBM3P98179 157 aaKnown RBP11.91□□□□□ -0.5
SSNA1-202ENST00000459860 DSCR8Q96T75 97 aa11.9□□□□□ -0.5
SSNA1-202ENST00000459860 CCKP06307 115 aa11.89□□□□□ -0.51
SSNA1-202ENST00000459860 C9orf118A6NHY6 69 aa11.88□□□□□ -0.51
SSNA1-202ENST00000459860 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
SSNA1-202ENST00000459860 VPS25Q9BRG1 176 aa11.85□□□□□ -0.51
SSNA1-202ENST00000459860 A0A1W2PPM0 123 aa11.83□□□□□ -0.52
SSNA1-202ENST00000459860 JMJD7-PLA2G4BH0Y9G9 81 aa11.83□□□□□ -0.52
SSNA1-202ENST00000459860 C9JAW5 83 aa11.82□□□□□ -0.52
SSNA1-202ENST00000459860 KRTAP9-6A0A140TA67 174 aa11.8□□□□□ -0.52
SSNA1-202ENST00000459860 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
SSNA1-202ENST00000459860 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
SSNA1-202ENST00000459860 Q96NJ1 140 aa11.77□□□□□ -0.53
SSNA1-202ENST00000459860 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
SSNA1-202ENST00000459860 OBSCN-AS1Q96MR7 158 aa11.76□□□□□ -0.53
SSNA1-202ENST00000459860 RPL37P61927 97 aaKnown RBP11.74□□□□□ -0.53
SSNA1-202ENST00000459860 PCOTHQ58A44 107 aa11.74□□□□□ -0.53
SSNA1-202ENST00000459860 H3BT86 120 aa11.73□□□□□ -0.53
SSNA1-202ENST00000459860 IGKV4-1P06312 121 aa11.73□□□□□ -0.53
SSNA1-202ENST00000459860 PDE6GP18545 87 aa11.73□□□□□ -0.53
SSNA1-202ENST00000459860 LOC110117498A0A087WWA1 95 aa11.72□□□□□ -0.53
SSNA1-202ENST00000459860 SPCS1Q9Y6A9 102 aa11.71□□□□□ -0.53
SSNA1-202ENST00000459860 Q6ZQT0 140 aa11.7□□□□□ -0.54
SSNA1-202ENST00000459860 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
SSNA1-202ENST00000459860 LINC00472Q9H8W2 130 aa11.68□□□□□ -0.54
SSNA1-202ENST00000459860 A0A1B0GW54 56 aa11.67□□□□□ -0.54
SSNA1-202ENST00000459860 PCP4L1A6NKN8 68 aa11.67□□□□□ -0.54
SSNA1-202ENST00000459860 MTURNQ8N3F0 131 aa11.67□□□□□ -0.54
SSNA1-202ENST00000459860 DEFB116Q30KQ4 102 aa11.66□□□□□ -0.54
SSNA1-202ENST00000459860 KRTAP4-1Q9BYQ7 146 aa11.65□□□□□ -0.54
SSNA1-202ENST00000459860 Q75L30 129 aa11.63□□□□□ -0.55
SSNA1-202ENST00000459860 DSCR10P59022 87 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms