RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.75□□□□□ -0.53
VARS-218ENST00000459667 Q8N377 158 aa11.75□□□□□ -0.53
VARS-218ENST00000459667 SMIM29Q86T20 159 aa11.73□□□□□ -0.53
VARS-218ENST00000459667 PRO1933Q9H354 126 aa11.73□□□□□ -0.53
VARS-218ENST00000459667 F8WEM9 126 aa11.72□□□□□ -0.53
VARS-218ENST00000459667 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
VARS-218ENST00000459667 HRCT1Q6UXD1 115 aa11.7□□□□□ -0.54
VARS-218ENST00000459667 PPDPFLQ8WWR9 84 aa11.7□□□□□ -0.54
VARS-218ENST00000459667 K7ERJ3 54 aa11.68□□□□□ -0.54
VARS-218ENST00000459667 PSMB2P49721 201 aa11.67□□□□□ -0.54
VARS-218ENST00000459667 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
VARS-218ENST00000459667 LIMD2Q9BT23 127 aa11.67□□□□□ -0.54
VARS-218ENST00000459667 A0A1B0GX51 115 aa11.66□□□□□ -0.54
VARS-218ENST00000459667 TRIAP1O43715 76 aa11.66□□□□□ -0.54
VARS-218ENST00000459667 CD164Q04900 197 aa11.66□□□□□ -0.54
VARS-218ENST00000459667 GHRHP01286 108 aa11.65□□□□□ -0.54
VARS-218ENST00000459667 COX6CP09669 75 aa11.65□□□□□ -0.54
VARS-218ENST00000459667 LOC105371267A0A1B0GV96 52 aa11.64□□□□□ -0.55
VARS-218ENST00000459667 M0R143 59 aa11.64□□□□□ -0.55
VARS-218ENST00000459667 FAM218AQ96MZ4 157 aa11.64□□□□□ -0.55
VARS-218ENST00000459667 SNHG12Q9BXW3 62 aa11.64□□□□□ -0.55
VARS-218ENST00000459667 KRTAP13-3Q3SY46 172 aa11.63□□□□□ -0.55
VARS-218ENST00000459667 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
VARS-218ENST00000459667 Q6JHZ5 121 aa11.61□□□□□ -0.55
VARS-218ENST00000459667 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
VARS-218ENST00000459667 DNAL4O96015 105 aa11.58□□□□□ -0.56
VARS-218ENST00000459667 IGLV8-61A0A075B6I0 122 aa11.57□□□□□ -0.56
VARS-218ENST00000459667 CLEC2BQ92478 149 aa11.57□□□□□ -0.56
VARS-218ENST00000459667 SCGB1C2P0DMR2 95 aa11.54□□□□□ -0.56
VARS-218ENST00000459667 H3BQ85 93 aa11.53□□□□□ -0.56
VARS-218ENST00000459667 FABP2P12104 132 aa11.53□□□□□ -0.56
VARS-218ENST00000459667 MUC17Q685J3 4493 aa11.53□□□□□ -0.56
VARS-218ENST00000459667 Q5XG85 94 aa11.52□□□□□ -0.57
VARS-218ENST00000459667 MUC2Q02817 5179 aa11.51□□□□□ -0.57
VARS-218ENST00000459667 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
VARS-218ENST00000459667 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
VARS-218ENST00000459667 ORMDL1Q9P0S3 153 aa11.51□□□□□ -0.57
VARS-218ENST00000459667 H3BUT2 72 aa11.49□□□□□ -0.57
VARS-218ENST00000459667 TCL1BO95988 128 aa11.49□□□□□ -0.57
VARS-218ENST00000459667 TRACP01848 142 aa11.46□□□□□ -0.57
VARS-218ENST00000459667 H3BMG7 143 aa11.45□□□□□ -0.58
VARS-218ENST00000459667 TMEM256-PLSCR3K7ERE1 68 aa11.45□□□□□ -0.58
VARS-218ENST00000459667 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
VARS-218ENST00000459667 LST1O00453 97 aa11.44□□□□□ -0.58
VARS-218ENST00000459667 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
VARS-218ENST00000459667 BATFQ16520 125 aa11.43□□□□□ -0.58
VARS-218ENST00000459667 XP32Q5T750 250 aa11.43□□□□□ -0.58
VARS-218ENST00000459667 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
VARS-218ENST00000459667 A0A0U1RQV1 116 aa11.41□□□□□ -0.58
VARS-218ENST00000459667 SEC61BP60468 96 aaKnown RBP11.4□□□□□ -0.58
VARS-218ENST00000459667 C9orf92A6NGG3 77 aa11.39□□□□□ -0.59
VARS-218ENST00000459667 LYRM7Q5U5X0 104 aa11.38□□□□□ -0.59
VARS-218ENST00000459667 Q6Q795 121 aa11.38□□□□□ -0.59
VARS-218ENST00000459667 TEN1Q86WV5 123 aa11.38□□□□□ -0.59
VARS-218ENST00000459667 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
VARS-218ENST00000459667 ATXN8Q156A1 80 aa11.37□□□□□ -0.59
VARS-218ENST00000459667 NAA38Q9BRA0 125 aaKnown RBP11.37□□□□□ -0.59
VARS-218ENST00000459667 SS18L2Q9UHA2 77 aa11.36□□□□□ -0.59
VARS-218ENST00000459667 ANKRD29Q8N6D5 301 aa11.34□□□□□ -0.59
VARS-218ENST00000459667 A0A1B0GV72 72 aa11.31□□□□□ -0.6
VARS-218ENST00000459667 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
VARS-218ENST00000459667 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
VARS-218ENST00000459667 A0A087WSZ3 146 aa11.28□□□□□ -0.6
VARS-218ENST00000459667 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
VARS-218ENST00000459667 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
VARS-218ENST00000459667 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
VARS-218ENST00000459667 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
VARS-218ENST00000459667 TRBV7-4A0A0J9YYF1 115 aa11.25□□□□□ -0.61
VARS-218ENST00000459667 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
VARS-218ENST00000459667 DSCR8Q96T75 97 aa11.24□□□□□ -0.61
VARS-218ENST00000459667 CCKP06307 115 aa11.23□□□□□ -0.61
VARS-218ENST00000459667 TAX1BP3O14907 124 aa11.22□□□□□ -0.61
VARS-218ENST00000459667 PCOTHQ58A44 107 aa11.21□□□□□ -0.61
VARS-218ENST00000459667 A0A1W2PPM0 123 aa11.19□□□□□ -0.62
VARS-218ENST00000459667 JMJD7-PLA2G4BH0Y9G9 81 aa11.19□□□□□ -0.62
VARS-218ENST00000459667 C9JAW5 83 aa11.18□□□□□ -0.62
VARS-218ENST00000459667 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
VARS-218ENST00000459667 RPL37P61927 97 aaKnown RBP11.16□□□□□ -0.62
VARS-218ENST00000459667 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
VARS-218ENST00000459667 COL5A1-AS1Q5SY13 56 aa11.14□□□□□ -0.63
VARS-218ENST00000459667 LCE2AQ5TA79 106 aaPredicted RBP11.13□□□□□ -0.63
VARS-218ENST00000459667 OBSCN-AS1Q96MR7 158 aa11.12□□□□□ -0.63
VARS-218ENST00000459667 PDE6GP18545 87 aa11.11□□□□□ -0.63
VARS-218ENST00000459667 Q96NJ1 140 aa11.11□□□□□ -0.63
VARS-218ENST00000459667 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
VARS-218ENST00000459667 H3BT86 120 aa11.09□□□□□ -0.63
VARS-218ENST00000459667 SPCS1Q9Y6A9 102 aa11.08□□□□□ -0.64
VARS-218ENST00000459667 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
VARS-218ENST00000459667 IGKV4-1P06312 121 aa11.07□□□□□ -0.64
VARS-218ENST00000459667 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
VARS-218ENST00000459667 Q6ZQT0 140 aa11.06□□□□□ -0.64
VARS-218ENST00000459667 A0A1B0GW54 56 aa11.04□□□□□ -0.64
VARS-218ENST00000459667 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
VARS-218ENST00000459667 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
VARS-218ENST00000459667 Q75L30 129 aa11.02□□□□□ -0.65
VARS-218ENST00000459667 MTURNQ8N3F0 131 aa11.01□□□□□ -0.65
VARS-218ENST00000459667 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
VARS-218ENST00000459667 J3KT08 172 aa10.97□□□□□ -0.65
VARS-218ENST00000459667 DSCR10P59022 87 aa10.97□□□□□ -0.65
VARS-218ENST00000459667 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms