RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
LMCD1-206ENST00000456506 SLC25A20O43772 301 aa6.51□□□□□ -1.37
LMCD1-206ENST00000456506 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
LMCD1-206ENST00000456506 NPC2P61916 151 aa6.51□□□□□ -1.37
LMCD1-206ENST00000456506 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
LMCD1-206ENST00000456506 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
LMCD1-206ENST00000456506 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
LMCD1-206ENST00000456506 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
LMCD1-206ENST00000456506 K7ERJ3 54 aa6.48□□□□□ -1.37
LMCD1-206ENST00000456506 Q6ZRX8 168 aa6.48□□□□□ -1.37
LMCD1-206ENST00000456506 RAB37Q96AX2 223 aa6.48□□□□□ -1.37
LMCD1-206ENST00000456506 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
LMCD1-206ENST00000456506 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
LMCD1-206ENST00000456506 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
LMCD1-206ENST00000456506 CBY1Q9Y3M2 126 aa6.44□□□□□ -1.38
LMCD1-206ENST00000456506 IGLV8-61A0A075B6I0 122 aa6.42□□□□□ -1.38
LMCD1-206ENST00000456506 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
LMCD1-206ENST00000456506 H3BUT2 72 aa6.42□□□□□ -1.38
LMCD1-206ENST00000456506 ST20-AS1Q8NBB2 130 aa6.42□□□□□ -1.38
LMCD1-206ENST00000456506 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
LMCD1-206ENST00000456506 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
LMCD1-206ENST00000456506 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 TRIAP1O43715 76 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 COX6CP09669 75 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 SPRR1BP22528 89 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 LYRM7Q5U5X0 104 aa6.4□□□□□ -1.38
LMCD1-206ENST00000456506 TRBV20-1A0A075B6N2 111 aa6.39□□□□□ -1.39
LMCD1-206ENST00000456506 FABP2P12104 132 aa6.39□□□□□ -1.39
LMCD1-206ENST00000456506 TRAV23DV6A0A075B6W5 121 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 A0A1B0GV90 55 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 H0YGX0 51 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 H7C2G1 150 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 Q1RN00 199 aa6.38□□□□□ -1.39
LMCD1-206ENST00000456506 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
LMCD1-206ENST00000456506 PSMB2P49721 201 aa6.37□□□□□ -1.39
LMCD1-206ENST00000456506 A0A1B0GX51 115 aa6.36□□□□□ -1.39
LMCD1-206ENST00000456506 ZNF73O43830 326 aaPredicted RBP6.36□□□□□ -1.39
LMCD1-206ENST00000456506 VAMP3Q15836 100 aa6.36□□□□□ -1.39
LMCD1-206ENST00000456506 K7EP34 96 aa6.35□□□□□ -1.39
LMCD1-206ENST00000456506 C6orf99Q4VX62 202 aa6.35□□□□□ -1.39
LMCD1-206ENST00000456506 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
LMCD1-206ENST00000456506 LST1O00453 97 aa6.34□□□□□ -1.39
LMCD1-206ENST00000456506 TCL1BO95988 128 aa6.34□□□□□ -1.39
LMCD1-206ENST00000456506 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
LMCD1-206ENST00000456506 ELOF1P60002 83 aaKnown RBP6.34□□□□□ -1.39
LMCD1-206ENST00000456506 GTF2H5Q6ZYL4 71 aa6.34□□□□□ -1.39
LMCD1-206ENST00000456506 SPCS1Q9Y6A9 102 aa6.34□□□□□ -1.39
LMCD1-206ENST00000456506 TRACP01848 142 aa6.33□□□□□ -1.4
LMCD1-206ENST00000456506 UBE2V1Q13404 147 aa6.33□□□□□ -1.4
LMCD1-206ENST00000456506 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
LMCD1-206ENST00000456506 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
LMCD1-206ENST00000456506 LINC00575Q6W349 94 aa6.32□□□□□ -1.4
LMCD1-206ENST00000456506 COX7BP24311 80 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
LMCD1-206ENST00000456506 CD164Q04900 197 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 Q5XG85 94 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
LMCD1-206ENST00000456506 H3BMG7 143 aa6.29□□□□□ -1.4
LMCD1-206ENST00000456506 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
LMCD1-206ENST00000456506 PRO0461Q9UI25 63 aa6.29□□□□□ -1.4
LMCD1-206ENST00000456506 USH2AO75445 5202 aa6.28□□□□□ -1.4
LMCD1-206ENST00000456506 M0R2T5 61 aa6.28□□□□□ -1.4
LMCD1-206ENST00000456506 SNCGO76070 127 aa6.28□□□□□ -1.4
LMCD1-206ENST00000456506 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
LMCD1-206ENST00000456506 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
LMCD1-206ENST00000456506 hADV29S1A0JD25 119 aa6.27□□□□□ -1.41
LMCD1-206ENST00000456506 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
LMCD1-206ENST00000456506 F8W1H4 67 aa6.27□□□□□ -1.41
LMCD1-206ENST00000456506 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
LMCD1-206ENST00000456506 H3BQ85 93 aa6.26□□□□□ -1.41
LMCD1-206ENST00000456506 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
LMCD1-206ENST00000456506 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
LMCD1-206ENST00000456506 H3BT86 120 aa6.25□□□□□ -1.41
LMCD1-206ENST00000456506 OCIAD2Q56VL3 154 aa6.25□□□□□ -1.41
LMCD1-206ENST00000456506 A0A0G2JQZ4 141 aa6.24□□□□□ -1.41
LMCD1-206ENST00000456506 C9JAW5 83 aa6.24□□□□□ -1.41
LMCD1-206ENST00000456506 GHRHP01286 108 aa6.24□□□□□ -1.41
LMCD1-206ENST00000456506 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
LMCD1-206ENST00000456506 DNAL4O96015 105 aa6.23□□□□□ -1.41
LMCD1-206ENST00000456506 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
LMCD1-206ENST00000456506 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 BAALC-AS2P0C853 105 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 ANKRD29Q8N6D5 301 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 ORMDL1Q9P0S3 153 aa6.22□□□□□ -1.41
LMCD1-206ENST00000456506 TMEM256-PLSCR3K7ERE1 68 aa6.21□□□□□ -1.42
LMCD1-206ENST00000456506 Q6ZQY7 126 aa6.21□□□□□ -1.42
LMCD1-206ENST00000456506 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
LMCD1-206ENST00000456506 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
LMCD1-206ENST00000456506 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
LMCD1-206ENST00000456506 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
LMCD1-206ENST00000456506 MTURNQ8N3F0 131 aa6.17□□□□□ -1.42
LMCD1-206ENST00000456506 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
LMCD1-206ENST00000456506 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms