RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 F8P00451 2351 aa3.02□□□□□ -1.93
PCDH9-203ENST00000456367 A0A0D9SG42 100 aa3.01□□□□□ -1.93
PCDH9-203ENST00000456367 KRTAP10-11P60412 298 aa3.01□□□□□ -1.93
PCDH9-203ENST00000456367 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
PCDH9-203ENST00000456367 CEP295Q9C0D2 2601 aa3.01□□□□□ -1.93
PCDH9-203ENST00000456367 WWC2-AS2Q96NR7 200 aa3□□□□□ -1.93
PCDH9-203ENST00000456367 PLAC8Q9NZF1 115 aa3□□□□□ -1.93
PCDH9-203ENST00000456367 FASNP49327 2511 aaKnown RBP2.99□□□□□ -1.93
PCDH9-203ENST00000456367 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
PCDH9-203ENST00000456367 A8MU10 97 aa2.99□□□□□ -1.93
PCDH9-203ENST00000456367 UNC80Q8N2C7 3258 aa2.99□□□□□ -1.93
PCDH9-203ENST00000456367 KRTAP24-1Q3LI83 254 aa2.98□□□□□ -1.93
PCDH9-203ENST00000456367 MTORP42345 2549 aa2.98□□□□□ -1.93
PCDH9-203ENST00000456367 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
PCDH9-203ENST00000456367 KRTAP1-3Q8IUG1 177 aa2.98□□□□□ -1.93
PCDH9-203ENST00000456367 SPENQ96T58 3664 aaKnown RBP2.98□□□□□ -1.93
PCDH9-203ENST00000456367 K7EIL1 84 aa2.97□□□□□ -1.93
PCDH9-203ENST00000456367 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.93
PCDH9-203ENST00000456367 PANO1I0J062 215 aa2.96□□□□□ -1.94
PCDH9-203ENST00000456367 ASPMQ8IZT6 3477 aa2.96□□□□□ -1.94
PCDH9-203ENST00000456367 C9orf92A6NGG3 77 aa2.96□□□□□ -1.94
PCDH9-203ENST00000456367 KRTAP1-1Q07627 177 aa2.96□□□□□ -1.94
PCDH9-203ENST00000456367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.96□□□□□ -1.94
PCDH9-203ENST00000456367 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
PCDH9-203ENST00000456367 CSMD2Q7Z408 3487 aa2.94□□□□□ -1.94
PCDH9-203ENST00000456367 PRRC2CQ9Y520 2896 aaKnown RBP2.93□□□□□ -1.94
PCDH9-203ENST00000456367 RELNP78509 3460 aa2.93□□□□□ -1.94
PCDH9-203ENST00000456367 POLQO75417 2590 aa2.93□□□□□ -1.94
PCDH9-203ENST00000456367 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
PCDH9-203ENST00000456367 S4R3F8 94 aa2.92□□□□□ -1.94
PCDH9-203ENST00000456367 ACANP16112 2415 aa2.92□□□□□ -1.94
PCDH9-203ENST00000456367 MUC3AQ02505 3323 aa2.92□□□□□ -1.94
PCDH9-203ENST00000456367 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.94
PCDH9-203ENST00000456367 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
PCDH9-203ENST00000456367 FLNBO75369 2602 aaKnown RBP2.9□□□□□ -1.95
PCDH9-203ENST00000456367 A8MUU9 505 aa2.89□□□□□ -1.95
PCDH9-203ENST00000456367 MKI67P46013 3256 aaKnown RBP2.89□□□□□ -1.95
PCDH9-203ENST00000456367 LAMA3Q16787 3333 aa2.89□□□□□ -1.95
PCDH9-203ENST00000456367 RPS29P62273 56 aaKnown RBP2.88□□□□□ -1.95
PCDH9-203ENST00000456367 KRTAP13-1Q8IUC0 172 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 KRTAP7-1Q8IUC3 87 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 HTTP42858 3142 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 SPTBN4Q9H254 2564 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 A0A0C4DFX4 3053 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 DNAH12Q6ZR08 3092 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 EPG5Q9HCE0 2579 aa2.88□□□□□ -1.95
PCDH9-203ENST00000456367 NBPF19A0A087WUL8 3843 aa2.87□□□□□ -1.95
PCDH9-203ENST00000456367 C20orf166-AS1Q96NR2 134 aa2.86□□□□□ -1.95
PCDH9-203ENST00000456367 KRTAP1-5Q9BYS1 174 aa2.86□□□□□ -1.95
PCDH9-203ENST00000456367 LAMA2P24043 3122 aaKnown RBP2.85□□□□□ -1.95
PCDH9-203ENST00000456367 M0QZ58 72 aa2.84□□□□□ -1.95
PCDH9-203ENST00000456367 R4GN34 69 aa2.84□□□□□ -1.95
PCDH9-203ENST00000456367 Q6ZSA8 131 aa2.84□□□□□ -1.96
PCDH9-203ENST00000456367 RANBP2P49792 3224 aaKnown RBP2.81□□□□□ -1.96
PCDH9-203ENST00000456367 CHD7Q9P2D1 2997 aa2.81□□□□□ -1.96
PCDH9-203ENST00000456367 FLNAP21333 2647 aaKnown RBP2.8□□□□□ -1.96
PCDH9-203ENST00000456367 CHD9Q3L8U1 2897 aa2.8□□□□□ -1.96
PCDH9-203ENST00000456367 SVEP1Q4LDE5 3571 aa2.8□□□□□ -1.96
PCDH9-203ENST00000456367 LCE2DQ5TA82 110 aaPredicted RBP2.79□□□□□ -1.96
PCDH9-203ENST00000456367 TNRC18O15417 2968 aaPredicted RBP2.79□□□□□ -1.96
PCDH9-203ENST00000456367 SPEGQ15772 3267 aa2.79□□□□□ -1.96
PCDH9-203ENST00000456367 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
PCDH9-203ENST00000456367 H0YAA0 97 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 CFAP54Q96N23 3096 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 UNC79Q9P2D8 2635 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 TRANK1O15050 2925 aa2.78□□□□□ -1.96
PCDH9-203ENST00000456367 SETXQ7Z333 2677 aaKnown RBP2.78□□□□□ -1.97
PCDH9-203ENST00000456367 EYSQ5T1H1 3165 aa2.77□□□□□ -1.97
PCDH9-203ENST00000456367 Q6ZRN7 208 aaPredicted RBP2.77□□□□□ -1.97
PCDH9-203ENST00000456367 CENPEQ02224 2701 aa2.77□□□□□ -1.97
PCDH9-203ENST00000456367 MAST4O15021 2626 aa2.77□□□□□ -1.97
PCDH9-203ENST00000456367 GCN1Q92616 2671 aaKnown RBP2.77□□□□□ -1.97
PCDH9-203ENST00000456367 ITPR3Q14573 2671 aa2.76□□□□□ -1.97
PCDH9-203ENST00000456367 ATRQ13535 2644 aa2.75□□□□□ -1.97
PCDH9-203ENST00000456367 P0C880 135 aa2.75□□□□□ -1.97
PCDH9-203ENST00000456367 USP24Q9UPU5 2620 aa2.75□□□□□ -1.97
PCDH9-203ENST00000456367 CHD6Q8TD26 2715 aa2.75□□□□□ -1.97
PCDH9-203ENST00000456367 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
PCDH9-203ENST00000456367 LAMA5O15230 3695 aa2.74□□□□□ -1.97
PCDH9-203ENST00000456367 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
PCDH9-203ENST00000456367 COL6A3P12111 3177 aa2.73□□□□□ -1.97
PCDH9-203ENST00000456367 PRUNE2Q8WUY3 3088 aa2.73□□□□□ -1.97
PCDH9-203ENST00000456367 DMBT1Q9UGM3 2413 aaPredicted RBP2.73□□□□□ -1.97
PCDH9-203ENST00000456367 KRTAP10-1P60331 282 aa2.73□□□□□ -1.97
PCDH9-203ENST00000456367 NBEAL1Q6ZS30 2694 aa2.72□□□□□ -1.97
PCDH9-203ENST00000456367 REV3LO60673 3130 aa2.72□□□□□ -1.97
PCDH9-203ENST00000456367 AKAP13Q12802 2813 aa2.72□□□□□ -1.97
PCDH9-203ENST00000456367 MGAM2Q2M2H8 2515 aa2.72□□□□□ -1.97
PCDH9-203ENST00000456367 CUBNO60494 3623 aa2.72□□□□□ -1.97
PCDH9-203ENST00000456367 CELSR3Q9NYQ7 3312 aa2.71□□□□□ -1.98
PCDH9-203ENST00000456367 BSNQ9UPA5 3926 aa2.7□□□□□ -1.98
PCDH9-203ENST00000456367 HELZ2Q9BYK8 2649 aaKnown RBP2.7□□□□□ -1.98
PCDH9-203ENST00000456367 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
PCDH9-203ENST00000456367 KRTAP10-2P60368 255 aa2.7□□□□□ -1.98
PCDH9-203ENST00000456367 FLG2Q5D862 2391 aaPredicted RBP2.7□□□□□ -1.98
PCDH9-203ENST00000456367 ITPR1Q14643 2758 aa2.7□□□□□ -1.98
PCDH9-203ENST00000456367 NBEAL2Q6ZNJ1 2754 aa2.69□□□□□ -1.98
PCDH9-203ENST00000456367 C5orf42Q9H799 3197 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms