RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 IGFL1Q6UW32 110 aa11.99□□□□□ -0.49
SEMA3B-208ENST00000456210 MP68P56378 58 aa11.99□□□□□ -0.49
SEMA3B-208ENST00000456210 PSPHP1O15172 72 aa11.98□□□□□ -0.49
SEMA3B-208ENST00000456210 MEGF8Q7Z7M0 2845 aa11.98□□□□□ -0.49
SEMA3B-208ENST00000456210 REG3GQ6UW15 175 aa11.98□□□□□ -0.49
SEMA3B-208ENST00000456210 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
SEMA3B-208ENST00000456210 PRR4Q16378 134 aa11.97□□□□□ -0.49
SEMA3B-208ENST00000456210 SEC61GP60059 68 aa11.96□□□□□ -0.49
SEMA3B-208ENST00000456210 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
SEMA3B-208ENST00000456210 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
SEMA3B-208ENST00000456210 SPANXA2-OT1Q8N9U9 137 aa11.95□□□□□ -0.5
SEMA3B-208ENST00000456210 WFDC13Q8IUB5 93 aa11.94□□□□□ -0.5
SEMA3B-208ENST00000456210 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
SEMA3B-208ENST00000456210 H3BPC8 53 aa11.93□□□□□ -0.5
SEMA3B-208ENST00000456210 PMAIP1Q13794 54 aa11.93□□□□□ -0.5
SEMA3B-208ENST00000456210 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
SEMA3B-208ENST00000456210 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
SEMA3B-208ENST00000456210 A0A1W2PNN7 141 aa11.91□□□□□ -0.5
SEMA3B-208ENST00000456210 A0A087WSZ3 146 aa11.9□□□□□ -0.5
SEMA3B-208ENST00000456210 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
SEMA3B-208ENST00000456210 LINC00208Q96KT6 92 aa11.9□□□□□ -0.5
SEMA3B-208ENST00000456210 A8MUN3 132 aa11.9□□□□□ -0.51
SEMA3B-208ENST00000456210 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.51
SEMA3B-208ENST00000456210 COL7A1Q02388 2944 aa11.89□□□□□ -0.51
SEMA3B-208ENST00000456210 Q5VV11 94 aa11.88□□□□□ -0.51
SEMA3B-208ENST00000456210 C11orf45Q8TAV5 145 aa11.88□□□□□ -0.51
SEMA3B-208ENST00000456210 K7EIL1 84 aa11.87□□□□□ -0.51
SEMA3B-208ENST00000456210 DNAH1Q9P2D7 4330 aa11.86□□□□□ -0.51
SEMA3B-208ENST00000456210 H0Y9P7 68 aa11.86□□□□□ -0.51
SEMA3B-208ENST00000456210 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
SEMA3B-208ENST00000456210 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
SEMA3B-208ENST00000456210 CASC2Q6XLA1 102 aa11.84□□□□□ -0.51
SEMA3B-208ENST00000456210 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.51
SEMA3B-208ENST00000456210 LIMD2Q9BT23 127 aa11.83□□□□□ -0.52
SEMA3B-208ENST00000456210 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-208ENST00000456210 Q8N9P0 234 aaPredicted RBP11.82□□□□□ -0.52
SEMA3B-208ENST00000456210 PRLHP81277 87 aa11.82□□□□□ -0.52
SEMA3B-208ENST00000456210 C9orf163Q8N9P6 203 aa11.81□□□□□ -0.52
SEMA3B-208ENST00000456210 A8MWP4 228 aa11.8□□□□□ -0.52
SEMA3B-208ENST00000456210 UBE2AP49459 152 aa11.78□□□□□ -0.52
SEMA3B-208ENST00000456210 LINC00472Q9H8W2 130 aa11.77□□□□□ -0.52
SEMA3B-208ENST00000456210 FBN3Q75N90 2809 aa11.77□□□□□ -0.52
SEMA3B-208ENST00000456210 TGP01266 2768 aa11.77□□□□□ -0.53
SEMA3B-208ENST00000456210 SPRR1BP22528 89 aa11.77□□□□□ -0.53
SEMA3B-208ENST00000456210 C16orf90A8MZG2 172 aa11.75□□□□□ -0.53
SEMA3B-208ENST00000456210 A0A096LNI7 61 aa11.74□□□□□ -0.53
SEMA3B-208ENST00000456210 A8MU10 97 aa11.74□□□□□ -0.53
SEMA3B-208ENST00000456210 DNAH9Q9NYC9 4486 aa11.73□□□□□ -0.53
SEMA3B-208ENST00000456210 CHKB-CPT1BH3BT56 60 aa11.72□□□□□ -0.53
SEMA3B-208ENST00000456210 HUWE1Q7Z6Z7 4374 aaKnown RBP11.71□□□□□ -0.53
SEMA3B-208ENST00000456210 H0Y9J4 135 aa11.71□□□□□ -0.54
SEMA3B-208ENST00000456210 PRR15LQ9BU68 103 aa11.71□□□□□ -0.54
SEMA3B-208ENST00000456210 Q75L30 129 aa11.7□□□□□ -0.54
SEMA3B-208ENST00000456210 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
SEMA3B-208ENST00000456210 LOC101927531A0A1B0GV80 90 aa11.69□□□□□ -0.54
SEMA3B-208ENST00000456210 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
SEMA3B-208ENST00000456210 COA5Q86WW8 74 aa11.67□□□□□ -0.54
SEMA3B-208ENST00000456210 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
SEMA3B-208ENST00000456210 STAB2Q8WWQ8 2551 aa11.66□□□□□ -0.54
SEMA3B-208ENST00000456210 CD164Q04900 197 aa11.64□□□□□ -0.55
SEMA3B-208ENST00000456210 KRTAP11-1Q8IUC1 163 aa11.62□□□□□ -0.55
SEMA3B-208ENST00000456210 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
SEMA3B-208ENST00000456210 ATP11AUNQ6ZP68 121 aa11.61□□□□□ -0.55
SEMA3B-208ENST00000456210 LCA10Q71F78 164 aa11.61□□□□□ -0.55
SEMA3B-208ENST00000456210 KTN1-AS1Q86SY8 53 aa11.59□□□□□ -0.55
SEMA3B-208ENST00000456210 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-208ENST00000456210 TP53AIP1Q9HCN2 124 aa11.59□□□□□ -0.55
SEMA3B-208ENST00000456210 A6NED7 52 aa11.56□□□□□ -0.56
SEMA3B-208ENST00000456210 MOBPQ13875 183 aa11.56□□□□□ -0.56
SEMA3B-208ENST00000456210 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
SEMA3B-208ENST00000456210 Q6ZR54 194 aa11.55□□□□□ -0.56
SEMA3B-208ENST00000456210 LINC01558Q9Y6Z2 57 aa11.55□□□□□ -0.56
SEMA3B-208ENST00000456210 Q96NJ1 140 aa11.54□□□□□ -0.56
SEMA3B-208ENST00000456210 CDC42SE1Q9NRR8 79 aa11.54□□□□□ -0.56
SEMA3B-208ENST00000456210 KRTAP1-5Q9BYS1 174 aa11.53□□□□□ -0.56
SEMA3B-208ENST00000456210 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.57
SEMA3B-208ENST00000456210 CHTF8P0CG12 524 aa11.51□□□□□ -0.57
SEMA3B-208ENST00000456210 PCOTHQ58A44 107 aa11.51□□□□□ -0.57
SEMA3B-208ENST00000456210 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
SEMA3B-208ENST00000456210 A6NN06 94 aa11.51□□□□□ -0.57
SEMA3B-208ENST00000456210 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
SEMA3B-208ENST00000456210 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
SEMA3B-208ENST00000456210 NDUFS5O43920 106 aa11.48□□□□□ -0.57
SEMA3B-208ENST00000456210 C8orf17Q9NRJ1 99 aa11.48□□□□□ -0.57
SEMA3B-208ENST00000456210 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
SEMA3B-208ENST00000456210 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
SEMA3B-208ENST00000456210 SPAG11AQ6PDA7 123 aa11.44□□□□□ -0.58
SEMA3B-208ENST00000456210 LYSTQ99698 3801 aa11.41□□□□□ -0.58
SEMA3B-208ENST00000456210 HRES1P13985 223 aa11.41□□□□□ -0.58
SEMA3B-208ENST00000456210 SRRM2Q9UQ35 2752 aaKnown RBP11.41□□□□□ -0.58
SEMA3B-208ENST00000456210 A0A1B0GVX0 72 aa11.4□□□□□ -0.58
SEMA3B-208ENST00000456210 RBM12B-AS1Q9P1G2 102 aa11.4□□□□□ -0.58
SEMA3B-208ENST00000456210 DNAH7Q8WXX0 4024 aa11.39□□□□□ -0.59
SEMA3B-208ENST00000456210 UBE2DNLQ8IWF7 75 aa11.39□□□□□ -0.59
SEMA3B-208ENST00000456210 APLNQ9ULZ1 77 aa11.39□□□□□ -0.59
SEMA3B-208ENST00000456210 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
SEMA3B-208ENST00000456210 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
SEMA3B-208ENST00000456210 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
SEMA3B-208ENST00000456210 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
SEMA3B-208ENST00000456210 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms