RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 Q8NDZ9 215 aa6.08□□□□□ -1.44
SCN5A-210ENST00000455624 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
SCN5A-210ENST00000455624 SPRR1BP22528 89 aa6.07□□□□□ -1.44
SCN5A-210ENST00000455624 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
SCN5A-210ENST00000455624 KRTAP26-1Q6PEX3 210 aa6.06□□□□□ -1.44
SCN5A-210ENST00000455624 CEP350Q5VT06 3117 aa6.06□□□□□ -1.44
SCN5A-210ENST00000455624 DNAH14Q0VDD8 3507 aa6.06□□□□□ -1.44
SCN5A-210ENST00000455624 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
SCN5A-210ENST00000455624 C5orf42Q9H799 3197 aa6.05□□□□□ -1.44
SCN5A-210ENST00000455624 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
SCN5A-210ENST00000455624 Q5VV11 94 aa6.04□□□□□ -1.44
SCN5A-210ENST00000455624 ANKRD17O75179 2603 aaKnown RBP6.04□□□□□ -1.44
SCN5A-210ENST00000455624 POLQO75417 2590 aa6.03□□□□□ -1.44
SCN5A-210ENST00000455624 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
SCN5A-210ENST00000455624 H3BS24 57 aa6□□□□□ -1.45
SCN5A-210ENST00000455624 Q6ZR54 194 aa6□□□□□ -1.45
SCN5A-210ENST00000455624 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
SCN5A-210ENST00000455624 BRCA2P51587 3418 aa5.95□□□□□ -1.46
SCN5A-210ENST00000455624 PRRC2CQ9Y520 2896 aaKnown RBP5.92□□□□□ -1.46
SCN5A-210ENST00000455624 SZT2Q5T011 3432 aa5.91□□□□□ -1.46
SCN5A-210ENST00000455624 EPG5Q9HCE0 2579 aa5.9□□□□□ -1.46
SCN5A-210ENST00000455624 MKI67P46013 3256 aaKnown RBP5.9□□□□□ -1.46
SCN5A-210ENST00000455624 MGAM2Q2M2H8 2515 aa5.89□□□□□ -1.47
SCN5A-210ENST00000455624 HECTD1Q9ULT8 2610 aa5.88□□□□□ -1.47
SCN5A-210ENST00000455624 FLNBO75369 2602 aaKnown RBP5.87□□□□□ -1.47
SCN5A-210ENST00000455624 PANO1I0J062 215 aa5.87□□□□□ -1.47
SCN5A-210ENST00000455624 A0A087X002 238 aa5.86□□□□□ -1.47
SCN5A-210ENST00000455624 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.47
SCN5A-210ENST00000455624 A8MUU9 505 aa5.82□□□□□ -1.48
SCN5A-210ENST00000455624 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
SCN5A-210ENST00000455624 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
SCN5A-210ENST00000455624 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
SCN5A-210ENST00000455624 UNC80Q8N2C7 3258 aa5.8□□□□□ -1.48
SCN5A-210ENST00000455624 XIRP2A4UGR9 3374 aa5.8□□□□□ -1.48
SCN5A-210ENST00000455624 HTTP42858 3142 aa5.8□□□□□ -1.48
SCN5A-210ENST00000455624 LAMA3Q16787 3333 aa5.79□□□□□ -1.48
SCN5A-210ENST00000455624 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
SCN5A-210ENST00000455624 RANBP2P49792 3224 aaKnown RBP5.77□□□□□ -1.49
SCN5A-210ENST00000455624 USP34Q70CQ2 3546 aa5.77□□□□□ -1.49
SCN5A-210ENST00000455624 A8MU10 97 aa5.76□□□□□ -1.49
SCN5A-210ENST00000455624 CHD7Q9P2D1 2997 aa5.76□□□□□ -1.49
SCN5A-210ENST00000455624 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
SCN5A-210ENST00000455624 A6NN06 94 aa5.75□□□□□ -1.49
SCN5A-210ENST00000455624 AKAP13Q12802 2813 aa5.73□□□□□ -1.49
SCN5A-210ENST00000455624 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
SCN5A-210ENST00000455624 KRTAP21-3Q3LHN1 58 aa5.72□□□□□ -1.49
SCN5A-210ENST00000455624 CDH23Q9H251 3354 aa5.71□□□□□ -1.49
SCN5A-210ENST00000455624 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.5
SCN5A-210ENST00000455624 FREM2Q5SZK8 3169 aa5.7□□□□□ -1.5
SCN5A-210ENST00000455624 LAMA2P24043 3122 aaKnown RBP5.7□□□□□ -1.5
SCN5A-210ENST00000455624 ATRQ13535 2644 aa5.69□□□□□ -1.5
SCN5A-210ENST00000455624 CFAP54Q96N23 3096 aa5.69□□□□□ -1.5
SCN5A-210ENST00000455624 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
SCN5A-210ENST00000455624 Q6ZRN7 208 aaPredicted RBP5.68□□□□□ -1.5
SCN5A-210ENST00000455624 TNP1P09430 55 aa5.66□□□□□ -1.5
SCN5A-210ENST00000455624 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
SCN5A-210ENST00000455624 SPTBN5Q9NRC6 3674 aaKnown RBP5.64□□□□□ -1.51
SCN5A-210ENST00000455624 MYO15AQ9UKN7 3530 aa5.64□□□□□ -1.51
SCN5A-210ENST00000455624 VCANP13611 3396 aa5.63□□□□□ -1.51
SCN5A-210ENST00000455624 MAST4O15021 2626 aa5.63□□□□□ -1.51
SCN5A-210ENST00000455624 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
SCN5A-210ENST00000455624 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
SCN5A-210ENST00000455624 CHD9Q3L8U1 2897 aa5.62□□□□□ -1.51
SCN5A-210ENST00000455624 HELZ2Q9BYK8 2649 aaKnown RBP5.61□□□□□ -1.51
SCN5A-210ENST00000455624 TRIOO75962 3097 aa5.61□□□□□ -1.51
SCN5A-210ENST00000455624 CFAP46Q8IYW2 2715 aa5.61□□□□□ -1.51
SCN5A-210ENST00000455624 REV3LO60673 3130 aa5.6□□□□□ -1.51
SCN5A-210ENST00000455624 COL6A3P12111 3177 aa5.6□□□□□ -1.51
SCN5A-210ENST00000455624 CELSR3Q9NYQ7 3312 aa5.59□□□□□ -1.51
SCN5A-210ENST00000455624 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.51
SCN5A-210ENST00000455624 FLNAP21333 2647 aaKnown RBP5.59□□□□□ -1.51
SCN5A-210ENST00000455624 KRTAP13-1Q8IUC0 172 aa5.57□□□□□ -1.52
SCN5A-210ENST00000455624 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
SCN5A-210ENST00000455624 SPEGQ15772 3267 aa5.57□□□□□ -1.52
SCN5A-210ENST00000455624 WDFY3Q8IZQ1 3526 aa5.55□□□□□ -1.52
SCN5A-210ENST00000455624 ITPR3Q14573 2671 aa5.54□□□□□ -1.52
SCN5A-210ENST00000455624 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
SCN5A-210ENST00000455624 LAMA1P25391 3075 aa5.53□□□□□ -1.52
SCN5A-210ENST00000455624 NDUFAF8A1L188 74 aa5.52□□□□□ -1.53
SCN5A-210ENST00000455624 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
SCN5A-210ENST00000455624 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
SCN5A-210ENST00000455624 TRANK1O15050 2925 aa5.5□□□□□ -1.53
SCN5A-210ENST00000455624 DCHS1Q96JQ0 3298 aa5.48□□□□□ -1.53
SCN5A-210ENST00000455624 WDFY4Q6ZS81 3184 aa5.47□□□□□ -1.53
SCN5A-210ENST00000455624 CHD6Q8TD26 2715 aa5.47□□□□□ -1.53
SCN5A-210ENST00000455624 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
SCN5A-210ENST00000455624 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.53
SCN5A-210ENST00000455624 XP32Q5T750 250 aa5.44□□□□□ -1.54
SCN5A-210ENST00000455624 ZZEF1O43149 2961 aa5.44□□□□□ -1.54
SCN5A-210ENST00000455624 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
SCN5A-210ENST00000455624 NBEAQ8NFP9 2946 aa5.43□□□□□ -1.54
SCN5A-210ENST00000455624 CENPEQ02224 2701 aa5.43□□□□□ -1.54
SCN5A-210ENST00000455624 FRYLO94915 3013 aa5.39□□□□□ -1.55
SCN5A-210ENST00000455624 TEX15Q9BXT5 2789 aa5.39□□□□□ -1.55
SCN5A-210ENST00000455624 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
SCN5A-210ENST00000455624 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
SCN5A-210ENST00000455624 ZFHX4Q86UP3 3567 aa5.37□□□□□ -1.55
SCN5A-210ENST00000455624 FRYQ5TBA9 3013 aa5.37□□□□□ -1.55
SCN5A-210ENST00000455624 BAHCC1Q9P281 2608 aa5.37□□□□□ -1.55
SCN5A-210ENST00000455624 CSMD1Q96PZ7 3565 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms