RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-223	ENST00000452489	ABCA12	Q86UK0	2595 aa		11.68	□□□□□ -0.54
PTPA-223	ENST00000452489	LINC01554	Q52M75	96 aa		11.66	□□□□□ -0.54
PTPA-223	ENST00000452489		A8MWP4	228 aa		11.66	□□□□□ -0.54
PTPA-223	ENST00000452489	SPART-AS1	P0CW21	52 aa		11.66	□□□□□ -0.54
PTPA-223	ENST00000452489	MDFI	Q99750	246 aa		11.66	□□□□□ -0.54
PTPA-223	ENST00000452489	HRES1	P13985	223 aa		11.65	□□□□□ -0.54
PTPA-223	ENST00000452489	PLA2G2D	Q9UNK4	145 aa		11.64	□□□□□ -0.55
PTPA-223	ENST00000452489	MTOR	P42345	2549 aa		11.64	□□□□□ -0.55
PTPA-223	ENST00000452489	VWF	P04275	2813 aa		11.63	□□□□□ -0.55
PTPA-223	ENST00000452489	KRTAP10-9	P60411	292 aa		11.61	□□□□□ -0.55
PTPA-223	ENST00000452489	MMP24-AS1	A0A0U1RRL7	71 aa		11.6	□□□□□ -0.55
PTPA-223	ENST00000452489		H0Y9J4	135 aa		11.6	□□□□□ -0.55
PTPA-223	ENST00000452489	MYO18B	Q8IUG5	2567 aa		11.6	□□□□□ -0.55
PTPA-223	ENST00000452489	LINC00472	Q9H8W2	130 aa		11.6	□□□□□ -0.55
PTPA-223	ENST00000452489	REG3G	Q6UW15	175 aa		11.59	□□□□□ -0.55
PTPA-223	ENST00000452489	PRLH	P81277	87 aa		11.59	□□□□□ -0.55
PTPA-223	ENST00000452489	FAM208B	Q5VWN6	2430 aa		11.59	□□□□□ -0.55
PTPA-223	ENST00000452489	IGSF10	Q6WRI0	2623 aa		11.59	□□□□□ -0.55
PTPA-223	ENST00000452489	HIVEP1	P15822	2718 aa		11.58	□□□□□ -0.56
PTPA-223	ENST00000452489	IGLV8-61	A0A075B6I0	122 aa		11.58	□□□□□ -0.56
PTPA-223	ENST00000452489	TLX1NB	P0CAT3	122 aa		11.58	□□□□□ -0.56
PTPA-223	ENST00000452489	USP24	Q9UPU5	2620 aa		11.57	□□□□□ -0.56
PTPA-223	ENST00000452489	PKD1L1	Q8TDX9	2849 aa		11.57	□□□□□ -0.56
PTPA-223	ENST00000452489	PLA2G1B	P04054	148 aa	Known RBP	11.56	□□□□□ -0.56
PTPA-223	ENST00000452489	CSMD3	Q7Z407	3707 aa		11.55	□□□□□ -0.56
PTPA-223	ENST00000452489	ITPR3	Q14573	2671 aa		11.54	□□□□□ -0.56
PTPA-223	ENST00000452489	PRR26	Q8N8Z3	221 aa		11.54	□□□□□ -0.56
PTPA-223	ENST00000452489	IGKV2-24	A0A0C4DH68	120 aa		11.53	□□□□□ -0.56
PTPA-223	ENST00000452489	SRRM2	Q9UQ35	2752 aa	Known RBP	11.53	□□□□□ -0.56
PTPA-223	ENST00000452489	BAHCC1	Q9P281	2608 aa		11.52	□□□□□ -0.57
PTPA-223	ENST00000452489	TRRAP	Q9Y4A5	3859 aa		11.51	□□□□□ -0.57
PTPA-223	ENST00000452489	TENM2	Q9NT68	2774 aa		11.5	□□□□□ -0.57
PTPA-223	ENST00000452489	CASC10	Q5T4H9	136 aa		11.49	□□□□□ -0.57
PTPA-223	ENST00000452489	KRTAP10-3	P60369	221 aa		11.49	□□□□□ -0.57
PTPA-223	ENST00000452489	DEFB113	Q30KQ7	82 aa		11.49	□□□□□ -0.57
PTPA-223	ENST00000452489	UBR5	O95071	2799 aa	Predicted RBP	11.48	□□□□□ -0.57
PTPA-223	ENST00000452489	FLNA	P21333	2647 aa	Known RBP	11.47	□□□□□ -0.57
PTPA-223	ENST00000452489		A0A096LNI7	61 aa		11.46	□□□□□ -0.57
PTPA-223	ENST00000452489		Q6ZR54	194 aa		11.46	□□□□□ -0.58
PTPA-223	ENST00000452489	KRTAP1-3	Q8IUG1	177 aa		11.45	□□□□□ -0.58
PTPA-223	ENST00000452489	RTL8C	O15255	209 aa		11.44	□□□□□ -0.58
PTPA-223	ENST00000452489	LINC01556	Q5JQF7	62 aa		11.44	□□□□□ -0.58
PTPA-223	ENST00000452489	TP53AIP1	Q9HCN2	124 aa		11.43	□□□□□ -0.58
PTPA-223	ENST00000452489	ASB16-AS1	Q495Z4	193 aa		11.4	□□□□□ -0.59
PTPA-223	ENST00000452489	ACAN	P16112	2415 aa		11.39	□□□□□ -0.59
PTPA-223	ENST00000452489	ZNF462	Q96JM2	2506 aa		11.39	□□□□□ -0.59
PTPA-223	ENST00000452489	DEFB131B	A0A096LNP1	70 aa		11.38	□□□□□ -0.59
PTPA-223	ENST00000452489		H3BNG1	76 aa		11.36	□□□□□ -0.59
PTPA-223	ENST00000452489	CSAG1	Q6PB30	78 aa		11.35	□□□□□ -0.59
PTPA-223	ENST00000452489	C8orf17	Q9NRJ1	99 aa		11.35	□□□□□ -0.59
PTPA-223	ENST00000452489		K7EIL1	84 aa		11.33	□□□□□ -0.6
PTPA-223	ENST00000452489		Q96NJ1	140 aa		11.33	□□□□□ -0.6
PTPA-223	ENST00000452489	RETNLB	Q9BQ08	111 aa		11.32	□□□□□ -0.6
PTPA-223	ENST00000452489	KRTAP11-1	Q8IUC1	163 aa		11.3	□□□□□ -0.6
PTPA-223	ENST00000452489	IGHV6-1	A0A0B4J1U7	121 aa		11.3	□□□□□ -0.6
PTPA-223	ENST00000452489	SPATA8	Q6RVD6	105 aa		11.29	□□□□□ -0.6
PTPA-223	ENST00000452489	PDZD2	O15018	2839 aa		11.29	□□□□□ -0.6
PTPA-223	ENST00000452489	FBN1	P35555	2871 aa	Known RBP	11.28	□□□□□ -0.6
PTPA-223	ENST00000452489	SPRR1B	P22528	89 aa		11.28	□□□□□ -0.6
PTPA-223	ENST00000452489	DNAH10OS	P0CZ25	163 aa		11.26	□□□□□ -0.61
PTPA-223	ENST00000452489	ALMS1	Q8TCU4	4167 aa		11.26	□□□□□ -0.61
PTPA-223	ENST00000452489		A0A1B0GU69	56 aa		11.26	□□□□□ -0.61
PTPA-223	ENST00000452489		A0A087X002	238 aa		11.24	□□□□□ -0.61
PTPA-223	ENST00000452489	NOTCH2NL	Q7Z3S9	236 aa		11.24	□□□□□ -0.61
PTPA-223	ENST00000452489	KRTAP1-1	Q07627	177 aa		11.23	□□□□□ -0.61
PTPA-223	ENST00000452489	MRPL34	Q9BQ48	92 aa	Known RBP	11.23	□□□□□ -0.61
PTPA-223	ENST00000452489	MIR22HG	Q0VDD5	57 aa		11.22	□□□□□ -0.61
PTPA-223	ENST00000452489	ACYP2	P14621	99 aa		11.22	□□□□□ -0.61
PTPA-223	ENST00000452489	TEP1	Q99973	2627 aa	Known RBP	11.21	□□□□□ -0.61
PTPA-223	ENST00000452489	TENM1	Q9UKZ4	2725 aa		11.21	□□□□□ -0.61
PTPA-223	ENST00000452489		A0A1B0GVX0	72 aa		11.2	□□□□□ -0.62
PTPA-223	ENST00000452489		Q5W150	140 aa		11.2	□□□□□ -0.62
PTPA-223	ENST00000452489	DNAH1	Q9P2D7	4330 aa		11.19	□□□□□ -0.62
PTPA-223	ENST00000452489	TENM3	Q9P273	2699 aa		11.19	□□□□□ -0.62
PTPA-223	ENST00000452489	TENM4	Q6N022	2769 aa		11.18	□□□□□ -0.62
PTPA-223	ENST00000452489	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPA-223	ENST00000452489	IGLV9-49	A0A0B4J1Y8	123 aa		11.16	□□□□□ -0.62
PTPA-223	ENST00000452489	UQCR11	O14957	56 aa		11.13	□□□□□ -0.63
PTPA-223	ENST00000452489	CHTF8	P0CG12	524 aa		11.12	□□□□□ -0.63
PTPA-223	ENST00000452489	COL7A1	Q02388	2944 aa		11.12	□□□□□ -0.63
PTPA-223	ENST00000452489	CDK2AP2	O75956	126 aa		11.1	□□□□□ -0.63
PTPA-223	ENST00000452489	KRTAP13-3	Q3SY46	172 aa		11.1	□□□□□ -0.63
PTPA-223	ENST00000452489	C1orf134	Q5TEV5	83 aa		11.09	□□□□□ -0.63
PTPA-223	ENST00000452489	DMAC1	Q96GE9	116 aa		11.09	□□□□□ -0.63
PTPA-223	ENST00000452489	HELZ2	Q9BYK8	2649 aa	Known RBP	11.08	□□□□□ -0.64
PTPA-223	ENST00000452489	DNAH10	Q8IVF4	4471 aa		11.08	□□□□□ -0.64
PTPA-223	ENST00000452489	ZNF861P	O60384	105 aa		11.06	□□□□□ -0.64
PTPA-223	ENST00000452489	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.04	□□□□□ -0.64
PTPA-223	ENST00000452489	NOTCH2	Q04721	2471 aa		11.03	□□□□□ -0.64
PTPA-223	ENST00000452489	SMR3A	Q99954	134 aa		11.02	□□□□□ -0.65
PTPA-223	ENST00000452489	ANK2	Q01484	3957 aa		11.02	□□□□□ -0.65
PTPA-223	ENST00000452489	LYST	Q99698	3801 aa		10.98	□□□□□ -0.65
PTPA-223	ENST00000452489	ATR	Q13535	2644 aa		10.98	□□□□□ -0.65
PTPA-223	ENST00000452489	HECTD1	Q9ULT8	2610 aa		10.98	□□□□□ -0.65
PTPA-223	ENST00000452489	SPINK6	Q6UWN8	80 aa		10.95	□□□□□ -0.66
PTPA-223	ENST00000452489	KRTAP13-1	Q8IUC0	172 aa		10.95	□□□□□ -0.66
PTPA-223	ENST00000452489	FASN	P49327	2511 aa	Known RBP	10.94	□□□□□ -0.66
PTPA-223	ENST00000452489	ROMO1	P60602	79 aa		10.93	□□□□□ -0.66
PTPA-223	ENST00000452489	OXLD1	Q5BKU9	147 aa		10.92	□□□□□ -0.66
PTPA-223	ENST00000452489	ITPR2	Q14571	2701 aa		10.91	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms