RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
CPS1-204ENST00000451903 SPRR1AP35321 89 aa3.78□□□□□ -1.8
CPS1-204ENST00000451903 CEP350Q5VT06 3117 aa3.78□□□□□ -1.8
CPS1-204ENST00000451903 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
CPS1-204ENST00000451903 KRTAP10-9P60411 292 aa3.77□□□□□ -1.81
CPS1-204ENST00000451903 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
CPS1-204ENST00000451903 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
CPS1-204ENST00000451903 HECTD1Q9ULT8 2610 aa3.77□□□□□ -1.81
CPS1-204ENST00000451903 MAST4O15021 2626 aa3.76□□□□□ -1.81
CPS1-204ENST00000451903 R4GN34 69 aa3.76□□□□□ -1.81
CPS1-204ENST00000451903 ACANP16112 2415 aa3.76□□□□□ -1.81
CPS1-204ENST00000451903 SPRR1BP22528 89 aa3.76□□□□□ -1.81
CPS1-204ENST00000451903 UTRNP46939 3433 aa3.76□□□□□ -1.81
CPS1-204ENST00000451903 PCNTO95613 3336 aa3.75□□□□□ -1.81
CPS1-204ENST00000451903 HELZ2Q9BYK8 2649 aaKnown RBP3.74□□□□□ -1.81
CPS1-204ENST00000451903 SPTBN5Q9NRC6 3674 aaKnown RBP3.74□□□□□ -1.81
CPS1-204ENST00000451903 BPTFQ12830 3046 aa3.74□□□□□ -1.81
CPS1-204ENST00000451903 A0A1W2PPR1 153 aa3.74□□□□□ -1.81
CPS1-204ENST00000451903 PIEZO2Q9H5I5 2752 aa3.74□□□□□ -1.81
CPS1-204ENST00000451903 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
CPS1-204ENST00000451903 USP9YO00507 2555 aaPredicted RBP3.71□□□□□ -1.82
CPS1-204ENST00000451903 K7EIL1 84 aa3.69□□□□□ -1.82
CPS1-204ENST00000451903 MGAM2Q2M2H8 2515 aa3.68□□□□□ -1.82
CPS1-204ENST00000451903 Q6ZSA8 131 aa3.68□□□□□ -1.82
CPS1-204ENST00000451903 SETD2Q9BYW2 2564 aaPredicted RBP3.67□□□□□ -1.82
CPS1-204ENST00000451903 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
CPS1-204ENST00000451903 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CPS1-204ENST00000451903 H0YAA0 97 aa3.66□□□□□ -1.82
CPS1-204ENST00000451903 ZFHX4Q86UP3 3567 aa3.66□□□□□ -1.82
CPS1-204ENST00000451903 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
CPS1-204ENST00000451903 CENPFP49454 3210 aa3.64□□□□□ -1.83
CPS1-204ENST00000451903 NOTCH1P46531 2555 aa3.63□□□□□ -1.83
CPS1-204ENST00000451903 ATRQ13535 2644 aa3.62□□□□□ -1.83
CPS1-204ENST00000451903 INE1O15225 51 aa3.62□□□□□ -1.83
CPS1-204ENST00000451903 S4R3F8 94 aa3.6□□□□□ -1.83
CPS1-204ENST00000451903 STAB1Q9NY15 2570 aa3.6□□□□□ -1.83
CPS1-204ENST00000451903 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
CPS1-204ENST00000451903 DNAH12Q6ZR08 3092 aa3.56□□□□□ -1.84
CPS1-204ENST00000451903 ITPR3Q14573 2671 aa3.55□□□□□ -1.84
CPS1-204ENST00000451903 M0QZ58 72 aa3.55□□□□□ -1.84
CPS1-204ENST00000451903 TPRXLQ17RH7 258 aa3.54□□□□□ -1.84
CPS1-204ENST00000451903 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
CPS1-204ENST00000451903 MUC3AQ02505 3323 aa3.53□□□□□ -1.84
CPS1-204ENST00000451903 A0A0C4DFX4 3053 aa3.52□□□□□ -1.85
CPS1-204ENST00000451903 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
CPS1-204ENST00000451903 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
CPS1-204ENST00000451903 WDR87Q6ZQQ6 2873 aa3.49□□□□□ -1.85
CPS1-204ENST00000451903 BRCA2P51587 3418 aa3.48□□□□□ -1.85
CPS1-204ENST00000451903 LAMA3Q16787 3333 aa3.48□□□□□ -1.85
CPS1-204ENST00000451903 TEP1Q99973 2627 aaKnown RBP3.47□□□□□ -1.85
CPS1-204ENST00000451903 LAMA2P24043 3122 aaKnown RBP3.47□□□□□ -1.85
CPS1-204ENST00000451903 USP34Q70CQ2 3546 aa3.45□□□□□ -1.86
CPS1-204ENST00000451903 CFAP46Q8IYW2 2715 aa3.45□□□□□ -1.86
CPS1-204ENST00000451903 GCN1Q92616 2671 aaKnown RBP3.45□□□□□ -1.86
CPS1-204ENST00000451903 Q6ZRN7 208 aaPredicted RBP3.45□□□□□ -1.86
CPS1-204ENST00000451903 XIRP2A4UGR9 3374 aa3.44□□□□□ -1.86
CPS1-204ENST00000451903 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
CPS1-204ENST00000451903 HTTP42858 3142 aa3.42□□□□□ -1.86
CPS1-204ENST00000451903 RANBP2P49792 3224 aaKnown RBP3.4□□□□□ -1.86
CPS1-204ENST00000451903 CHD7Q9P2D1 2997 aa3.4□□□□□ -1.87
CPS1-204ENST00000451903 MKI67P46013 3256 aaKnown RBP3.4□□□□□ -1.87
CPS1-204ENST00000451903 COL6A5A8TX70 2615 aa3.39□□□□□ -1.87
CPS1-204ENST00000451903 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
CPS1-204ENST00000451903 CHD9Q3L8U1 2897 aa3.38□□□□□ -1.87
CPS1-204ENST00000451903 TNP1P09430 55 aa3.38□□□□□ -1.87
CPS1-204ENST00000451903 PRUNE2Q8WUY3 3088 aa3.38□□□□□ -1.87
CPS1-204ENST00000451903 VCANP13611 3396 aa3.37□□□□□ -1.87
CPS1-204ENST00000451903 M0R2T5 61 aa3.37□□□□□ -1.87
CPS1-204ENST00000451903 TRANK1O15050 2925 aa3.36□□□□□ -1.87
CPS1-204ENST00000451903 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
CPS1-204ENST00000451903 WDFY3Q8IZQ1 3526 aa3.35□□□□□ -1.87
CPS1-204ENST00000451903 NBEAL1Q6ZS30 2694 aa3.35□□□□□ -1.87
CPS1-204ENST00000451903 SMR3BP02814 79 aaPredicted RBP3.35□□□□□ -1.87
CPS1-204ENST00000451903 SZT2Q5T011 3432 aa3.34□□□□□ -1.87
CPS1-204ENST00000451903 KRTAP1-1Q07627 177 aa3.34□□□□□ -1.88
CPS1-204ENST00000451903 FLNAP21333 2647 aaKnown RBP3.34□□□□□ -1.88
CPS1-204ENST00000451903 KRTAP1-3Q8IUG1 177 aa3.33□□□□□ -1.88
CPS1-204ENST00000451903 EYSQ5T1H1 3165 aa3.33□□□□□ -1.88
CPS1-204ENST00000451903 KRTAP10-11P60412 298 aa3.33□□□□□ -1.88
CPS1-204ENST00000451903 CDH23Q9H251 3354 aa3.32□□□□□ -1.88
CPS1-204ENST00000451903 CHD6Q8TD26 2715 aa3.32□□□□□ -1.88
CPS1-204ENST00000451903 DNAH14Q0VDD8 3507 aa3.32□□□□□ -1.88
CPS1-204ENST00000451903 UNC80Q8N2C7 3258 aa3.31□□□□□ -1.88
CPS1-204ENST00000451903 IGSF10Q6WRI0 2623 aa3.3□□□□□ -1.88
CPS1-204ENST00000451903 Q5VSD8 79 aa3.3□□□□□ -1.88
CPS1-204ENST00000451903 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
CPS1-204ENST00000451903 COL6A3P12111 3177 aa3.3□□□□□ -1.88
CPS1-204ENST00000451903 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
CPS1-204ENST00000451903 DMDP11532 3685 aa3.29□□□□□ -1.88
CPS1-204ENST00000451903 SPEGQ15772 3267 aa3.28□□□□□ -1.88
CPS1-204ENST00000451903 XP32Q5T750 250 aa3.28□□□□□ -1.88
CPS1-204ENST00000451903 ZNF292O60281 2723 aa3.28□□□□□ -1.88
CPS1-204ENST00000451903 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.88
CPS1-204ENST00000451903 PRRC2CQ9Y520 2896 aaKnown RBP3.27□□□□□ -1.89
CPS1-204ENST00000451903 STAB2Q8WWQ8 2551 aa3.27□□□□□ -1.89
CPS1-204ENST00000451903 REV3LO60673 3130 aa3.26□□□□□ -1.89
CPS1-204ENST00000451903 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
CPS1-204ENST00000451903 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
CPS1-204ENST00000451903 FLNCQ14315 2725 aa3.23□□□□□ -1.89
CPS1-204ENST00000451903 CFAP54Q96N23 3096 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms