RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 PRR4Q16378 134 aa5.86□□□□□ -1.47
LINC01238-204ENST00000451070 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
LINC01238-204ENST00000451070 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
LINC01238-204ENST00000451070 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
LINC01238-204ENST00000451070 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
LINC01238-204ENST00000451070 CFC1P0CG37 223 aa5.85□□□□□ -1.47
LINC01238-204ENST00000451070 VPREB1P12018 145 aa5.85□□□□□ -1.47
LINC01238-204ENST00000451070 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
LINC01238-204ENST00000451070 FP248Q71RG6 208 aaPredicted RBP5.85□□□□□ -1.47
LINC01238-204ENST00000451070 A0A087X002 238 aa5.84□□□□□ -1.47
LINC01238-204ENST00000451070 TTTY13Q9BZ97 58 aa5.84□□□□□ -1.47
LINC01238-204ENST00000451070 MUC2Q02817 5179 aa5.84□□□□□ -1.48
LINC01238-204ENST00000451070 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
LINC01238-204ENST00000451070 NDUFC1O43677 76 aa5.83□□□□□ -1.48
LINC01238-204ENST00000451070 Q6JHZ5 121 aa5.83□□□□□ -1.48
LINC01238-204ENST00000451070 LINC00167Q96N53 147 aa5.83□□□□□ -1.48
LINC01238-204ENST00000451070 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
LINC01238-204ENST00000451070 RPL37AP8A6NKH3 93 aa5.82□□□□□ -1.48
LINC01238-204ENST00000451070 COX6CP09669 75 aa5.82□□□□□ -1.48
LINC01238-204ENST00000451070 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
LINC01238-204ENST00000451070 COX7B2Q8TF08 81 aa5.82□□□□□ -1.48
LINC01238-204ENST00000451070 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
LINC01238-204ENST00000451070 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
LINC01238-204ENST00000451070 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
LINC01238-204ENST00000451070 ZNF22P17026 224 aaPredicted RBP5.8□□□□□ -1.48
LINC01238-204ENST00000451070 ANAPC11Q9NYG5 84 aa5.8□□□□□ -1.48
LINC01238-204ENST00000451070 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
LINC01238-204ENST00000451070 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
LINC01238-204ENST00000451070 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
LINC01238-204ENST00000451070 TYMSOSQ8TAI1 123 aa5.79□□□□□ -1.48
LINC01238-204ENST00000451070 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
LINC01238-204ENST00000451070 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
LINC01238-204ENST00000451070 LST1O00453 97 aa5.77□□□□□ -1.49
LINC01238-204ENST00000451070 CCKP06307 115 aa5.77□□□□□ -1.49
LINC01238-204ENST00000451070 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
LINC01238-204ENST00000451070 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
LINC01238-204ENST00000451070 NKAPP1Q8N9T2 125 aa5.77□□□□□ -1.49
LINC01238-204ENST00000451070 IGKV2-28A0A075B6P5 120 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 TMEM223A0PJW6 202 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 H7BZZ5 65 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 IGKV2D-28P01615 120 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
LINC01238-204ENST00000451070 NDUFS5O43920 106 aa5.75□□□□□ -1.49
LINC01238-204ENST00000451070 TIMM17BO60830 172 aa5.75□□□□□ -1.49
LINC01238-204ENST00000451070 UBE2AP49459 152 aa5.75□□□□□ -1.49
LINC01238-204ENST00000451070 FAM229BQ4G0N7 80 aa5.75□□□□□ -1.49
LINC01238-204ENST00000451070 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
LINC01238-204ENST00000451070 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 PRLHP81277 87 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 Q8NDZ9 215 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 SND1-IT1Q9HBX3 110 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
LINC01238-204ENST00000451070 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
LINC01238-204ENST00000451070 S100A7L2Q5SY68 101 aa5.73□□□□□ -1.49
LINC01238-204ENST00000451070 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
LINC01238-204ENST00000451070 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
LINC01238-204ENST00000451070 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
LINC01238-204ENST00000451070 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
LINC01238-204ENST00000451070 TRAV13-2A0A0B4J235 113 aa5.72□□□□□ -1.49
LINC01238-204ENST00000451070 M0R378 163 aa5.72□□□□□ -1.49
LINC01238-204ENST00000451070 TRIAP1O43715 76 aa5.72□□□□□ -1.49
LINC01238-204ENST00000451070 COX17Q14061 63 aa5.71□□□□□ -1.5
LINC01238-204ENST00000451070 Q1RN00 199 aa5.71□□□□□ -1.5
LINC01238-204ENST00000451070 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
LINC01238-204ENST00000451070 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
LINC01238-204ENST00000451070 C11orf86A6NJI1 115 aa5.7□□□□□ -1.5
LINC01238-204ENST00000451070 RBM3P98179 157 aaKnown RBP5.7□□□□□ -1.5
LINC01238-204ENST00000451070 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
LINC01238-204ENST00000451070 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
LINC01238-204ENST00000451070 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
LINC01238-204ENST00000451070 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
LINC01238-204ENST00000451070 Q1T7F1 81 aa5.67□□□□□ -1.5
LINC01238-204ENST00000451070 HIGD2AQ9BW72 106 aa5.67□□□□□ -1.5
LINC01238-204ENST00000451070 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
LINC01238-204ENST00000451070 ERC2-IT1O76042 136 aa5.65□□□□□ -1.5
LINC01238-204ENST00000451070 SPRR4Q96PI1 79 aa5.65□□□□□ -1.5
LINC01238-204ENST00000451070 LEPROTO15243 131 aa5.64□□□□□ -1.51
LINC01238-204ENST00000451070 LINC00158P58513 81 aa5.64□□□□□ -1.51
LINC01238-204ENST00000451070 Q6ZVQ6 151 aa5.64□□□□□ -1.51
LINC01238-204ENST00000451070 MUSTN1Q8IVN3 82 aa5.64□□□□□ -1.51
LINC01238-204ENST00000451070 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
LINC01238-204ENST00000451070 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
LINC01238-204ENST00000451070 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
LINC01238-204ENST00000451070 DNAL4O96015 105 aa5.62□□□□□ -1.51
LINC01238-204ENST00000451070 SPRR1AP35321 89 aa5.62□□□□□ -1.51
LINC01238-204ENST00000451070 OBSCN-AS1Q96MR7 158 aa5.62□□□□□ -1.51
LINC01238-204ENST00000451070 F8WEM9 126 aa5.61□□□□□ -1.51
LINC01238-204ENST00000451070 PRYO14603 147 aa5.61□□□□□ -1.51
LINC01238-204ENST00000451070 BAALC-AS2P0C853 105 aa5.61□□□□□ -1.51
LINC01238-204ENST00000451070 LCA10Q71F78 164 aa5.61□□□□□ -1.51
LINC01238-204ENST00000451070 H7C2G1 150 aa5.6□□□□□ -1.51
LINC01238-204ENST00000451070 NCR3O14931 201 aa5.6□□□□□ -1.51
LINC01238-204ENST00000451070 ZNF73O43830 326 aaPredicted RBP5.6□□□□□ -1.51
LINC01238-204ENST00000451070 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
LINC01238-204ENST00000451070 LINC00337Q8N6G1 96 aa5.6□□□□□ -1.51
LINC01238-204ENST00000451070 Q8NBF4 154 aa5.6□□□□□ -1.51
LINC01238-204ENST00000451070 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms