RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 VCANP13611 3396 aa8.8□□□□□ -1
ITGB4-202ENST00000449880 VPS13AQ96RL7 3174 aa8.78□□□□□ -1
ITGB4-202ENST00000449880 USP24Q9UPU5 2620 aa8.78□□□□□ -1
ITGB4-202ENST00000449880 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
ITGB4-202ENST00000449880 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
ITGB4-202ENST00000449880 H3BS24 57 aa8.76□□□□□ -1.01
ITGB4-202ENST00000449880 SPRR1AP35321 89 aa8.75□□□□□ -1.01
ITGB4-202ENST00000449880 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
ITGB4-202ENST00000449880 HRES1P13985 223 aa8.72□□□□□ -1.01
ITGB4-202ENST00000449880 CASC10Q5T4H9 136 aa8.72□□□□□ -1.01
ITGB4-202ENST00000449880 A0A1B0GU33 70 aa8.69□□□□□ -1.02
ITGB4-202ENST00000449880 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
ITGB4-202ENST00000449880 CELSR3Q9NYQ7 3312 aa8.68□□□□□ -1.02
ITGB4-202ENST00000449880 SPRR1BP22528 89 aa8.68□□□□□ -1.02
ITGB4-202ENST00000449880 Q8NDZ9 215 aa8.67□□□□□ -1.02
ITGB4-202ENST00000449880 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
ITGB4-202ENST00000449880 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
ITGB4-202ENST00000449880 Q8N1X5 172 aa8.65□□□□□ -1.03
ITGB4-202ENST00000449880 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.03
ITGB4-202ENST00000449880 REV3LO60673 3130 aa8.64□□□□□ -1.03
ITGB4-202ENST00000449880 SPINK7P58062 85 aa8.64□□□□□ -1.03
ITGB4-202ENST00000449880 DSPP15924 2871 aaKnown RBP8.64□□□□□ -1.03
ITGB4-202ENST00000449880 Q6ZSA8 131 aa8.64□□□□□ -1.03
ITGB4-202ENST00000449880 CFAP46Q8IYW2 2715 aa8.64□□□□□ -1.03
ITGB4-202ENST00000449880 LUZP6Q538Z0 58 aa8.64□□□□□ -1.03
ITGB4-202ENST00000449880 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
ITGB4-202ENST00000449880 TNP2Q05952 138 aa8.62□□□□□ -1.03
ITGB4-202ENST00000449880 CENPEQ02224 2701 aa8.61□□□□□ -1.03
ITGB4-202ENST00000449880 A0A0D9SG42 100 aa8.6□□□□□ -1.03
ITGB4-202ENST00000449880 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
ITGB4-202ENST00000449880 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
ITGB4-202ENST00000449880 MAST4O15021 2626 aa8.58□□□□□ -1.04
ITGB4-202ENST00000449880 COL6A3P12111 3177 aa8.57□□□□□ -1.04
ITGB4-202ENST00000449880 ATRQ13535 2644 aa8.57□□□□□ -1.04
ITGB4-202ENST00000449880 FRYQ5TBA9 3013 aa8.57□□□□□ -1.04
ITGB4-202ENST00000449880 IGSF10Q6WRI0 2623 aa8.56□□□□□ -1.04
ITGB4-202ENST00000449880 EYSQ5T1H1 3165 aa8.54□□□□□ -1.04
ITGB4-202ENST00000449880 Q5W150 140 aa8.53□□□□□ -1.04
ITGB4-202ENST00000449880 Q6ZR54 194 aa8.53□□□□□ -1.04
ITGB4-202ENST00000449880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
ITGB4-202ENST00000449880 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
ITGB4-202ENST00000449880 LCE6AA0A183 80 aa8.49□□□□□ -1.05
ITGB4-202ENST00000449880 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
ITGB4-202ENST00000449880 M0R2T5 61 aa8.49□□□□□ -1.05
ITGB4-202ENST00000449880 A6NN06 94 aa8.47□□□□□ -1.05
ITGB4-202ENST00000449880 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
ITGB4-202ENST00000449880 FRYLO94915 3013 aa8.47□□□□□ -1.05
ITGB4-202ENST00000449880 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
ITGB4-202ENST00000449880 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.06
ITGB4-202ENST00000449880 SPEGQ15772 3267 aa8.45□□□□□ -1.06
ITGB4-202ENST00000449880 A0A0A0MQY5 61 aa8.45□□□□□ -1.06
ITGB4-202ENST00000449880 USP34Q70CQ2 3546 aa8.44□□□□□ -1.06
ITGB4-202ENST00000449880 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
ITGB4-202ENST00000449880 ROMO1P60602 79 aa8.42□□□□□ -1.06
ITGB4-202ENST00000449880 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
ITGB4-202ENST00000449880 FREM2Q5SZK8 3169 aa8.41□□□□□ -1.06
ITGB4-202ENST00000449880 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
ITGB4-202ENST00000449880 DMXL2Q8TDJ6 3036 aa8.4□□□□□ -1.06
ITGB4-202ENST00000449880 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
ITGB4-202ENST00000449880 A0A087X002 238 aa8.39□□□□□ -1.07
ITGB4-202ENST00000449880 ADGRG4Q8IZF6 3080 aa8.38□□□□□ -1.07
ITGB4-202ENST00000449880 ATMQ13315 3056 aa8.38□□□□□ -1.07
ITGB4-202ENST00000449880 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
ITGB4-202ENST00000449880 LRBAP50851 2863 aa8.36□□□□□ -1.07
ITGB4-202ENST00000449880 TEX15Q9BXT5 2789 aa8.36□□□□□ -1.07
ITGB4-202ENST00000449880 UNC79Q9P2D8 2635 aa8.35□□□□□ -1.07
ITGB4-202ENST00000449880 CHD6Q8TD26 2715 aa8.35□□□□□ -1.07
ITGB4-202ENST00000449880 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
ITGB4-202ENST00000449880 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
ITGB4-202ENST00000449880 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
ITGB4-202ENST00000449880 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.08
ITGB4-202ENST00000449880 S4R3F8 94 aa8.33□□□□□ -1.08
ITGB4-202ENST00000449880 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
ITGB4-202ENST00000449880 MYO15AQ9UKN7 3530 aa8.31□□□□□ -1.08
ITGB4-202ENST00000449880 DMXL1Q9Y485 3027 aa8.31□□□□□ -1.08
ITGB4-202ENST00000449880 KALRNO60229 2985 aa8.3□□□□□ -1.08
ITGB4-202ENST00000449880 FLNCQ14315 2725 aa8.26□□□□□ -1.09
ITGB4-202ENST00000449880 COL12A1Q99715 3063 aa8.26□□□□□ -1.09
ITGB4-202ENST00000449880 SETXQ7Z333 2677 aaKnown RBP8.25□□□□□ -1.09
ITGB4-202ENST00000449880 R4GN34 69 aa8.24□□□□□ -1.09
ITGB4-202ENST00000449880 GCN1Q92616 2671 aaKnown RBP8.24□□□□□ -1.09
ITGB4-202ENST00000449880 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
ITGB4-202ENST00000449880 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
ITGB4-202ENST00000449880 Q5VSD8 79 aa8.23□□□□□ -1.09
ITGB4-202ENST00000449880 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
ITGB4-202ENST00000449880 UTP20O75691 2785 aaKnown RBP8.19□□□□□ -1.1
ITGB4-202ENST00000449880 TEP1Q99973 2627 aaKnown RBP8.18□□□□□ -1.1
ITGB4-202ENST00000449880 ITPR1Q14643 2758 aa8.18□□□□□ -1.1
ITGB4-202ENST00000449880 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
ITGB4-202ENST00000449880 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
ITGB4-202ENST00000449880 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
ITGB4-202ENST00000449880 HRNRQ86YZ3 2850 aaPredicted RBP8.13□□□□□ -1.11
ITGB4-202ENST00000449880 COL6A5A8TX70 2615 aa8.1□□□□□ -1.11
ITGB4-202ENST00000449880 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
ITGB4-202ENST00000449880 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
ITGB4-202ENST00000449880 TACC2O95359 2948 aa8.09□□□□□ -1.11
ITGB4-202ENST00000449880 PANO1I0J062 215 aa8.08□□□□□ -1.12
ITGB4-202ENST00000449880 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
ITGB4-202ENST00000449880 APCP25054 2843 aa8.06□□□□□ -1.12
ITGB4-202ENST00000449880 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms