RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CEP350Q5VT06 3117 aa6.15□□□□□ -1.43
SCN10A-201ENST00000449082 SPINK7P58062 85 aa6.14□□□□□ -1.43
SCN10A-201ENST00000449082 C5orf42Q9H799 3197 aa6.13□□□□□ -1.43
SCN10A-201ENST00000449082 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
SCN10A-201ENST00000449082 LINC00483Q53H64 154 aa6.11□□□□□ -1.43
SCN10A-201ENST00000449082 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
SCN10A-201ENST00000449082 Q75L30 129 aa6.09□□□□□ -1.43
SCN10A-201ENST00000449082 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
SCN10A-201ENST00000449082 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
SCN10A-201ENST00000449082 Q6ZR54 194 aa6.08□□□□□ -1.44
SCN10A-201ENST00000449082 CHD9Q3L8U1 2897 aa6.07□□□□□ -1.44
SCN10A-201ENST00000449082 R4GN34 69 aa6.07□□□□□ -1.44
SCN10A-201ENST00000449082 OXTP01178 125 aa6.07□□□□□ -1.44
SCN10A-201ENST00000449082 STAB1Q9NY15 2570 aa6.06□□□□□ -1.44
SCN10A-201ENST00000449082 CENPEQ02224 2701 aa6.03□□□□□ -1.44
SCN10A-201ENST00000449082 PANO1I0J062 215 aa6.02□□□□□ -1.44
SCN10A-201ENST00000449082 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
SCN10A-201ENST00000449082 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
SCN10A-201ENST00000449082 A0A0C4DFX4 3053 aa5.99□□□□□ -1.45
SCN10A-201ENST00000449082 ZNF292O60281 2723 aa5.99□□□□□ -1.45
SCN10A-201ENST00000449082 TEP1Q99973 2627 aaKnown RBP5.99□□□□□ -1.45
SCN10A-201ENST00000449082 PCNTO95613 3336 aa5.98□□□□□ -1.45
SCN10A-201ENST00000449082 CHD6Q8TD26 2715 aa5.98□□□□□ -1.45
SCN10A-201ENST00000449082 AKAP13Q12802 2813 aa5.97□□□□□ -1.45
SCN10A-201ENST00000449082 MGAQ8IWI9 3026 aa5.96□□□□□ -1.45
SCN10A-201ENST00000449082 A0A087X002 238 aa5.96□□□□□ -1.45
SCN10A-201ENST00000449082 HTTP42858 3142 aa5.96□□□□□ -1.46
SCN10A-201ENST00000449082 TRANK1O15050 2925 aa5.95□□□□□ -1.46
SCN10A-201ENST00000449082 M0QZ58 72 aa5.94□□□□□ -1.46
SCN10A-201ENST00000449082 COL6A5A8TX70 2615 aa5.94□□□□□ -1.46
SCN10A-201ENST00000449082 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
SCN10A-201ENST00000449082 Q5VV11 94 aa5.93□□□□□ -1.46
SCN10A-201ENST00000449082 SETXQ7Z333 2677 aaKnown RBP5.92□□□□□ -1.46
SCN10A-201ENST00000449082 NBEAL1Q6ZS30 2694 aa5.92□□□□□ -1.46
SCN10A-201ENST00000449082 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
SCN10A-201ENST00000449082 Q6ZRN7 208 aaPredicted RBP5.92□□□□□ -1.46
SCN10A-201ENST00000449082 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
SCN10A-201ENST00000449082 BAHCC1Q9P281 2608 aa5.91□□□□□ -1.46
SCN10A-201ENST00000449082 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
SCN10A-201ENST00000449082 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
SCN10A-201ENST00000449082 RANBP2P49792 3224 aaKnown RBP5.89□□□□□ -1.47
SCN10A-201ENST00000449082 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
SCN10A-201ENST00000449082 Q5XG85 94 aa5.89□□□□□ -1.47
SCN10A-201ENST00000449082 UNC79Q9P2D8 2635 aa5.89□□□□□ -1.47
SCN10A-201ENST00000449082 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
SCN10A-201ENST00000449082 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
SCN10A-201ENST00000449082 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
SCN10A-201ENST00000449082 ROMO1P60602 79 aa5.86□□□□□ -1.47
SCN10A-201ENST00000449082 H3BS24 57 aa5.86□□□□□ -1.47
SCN10A-201ENST00000449082 IGSF10Q6WRI0 2623 aa5.86□□□□□ -1.47
SCN10A-201ENST00000449082 CFAP54Q96N23 3096 aa5.86□□□□□ -1.47
SCN10A-201ENST00000449082 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
SCN10A-201ENST00000449082 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
SCN10A-201ENST00000449082 GCN1Q92616 2671 aaKnown RBP5.85□□□□□ -1.47
SCN10A-201ENST00000449082 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
SCN10A-201ENST00000449082 PRAC1Q96KF2 57 aa5.84□□□□□ -1.47
SCN10A-201ENST00000449082 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
SCN10A-201ENST00000449082 NOTCH1P46531 2555 aa5.82□□□□□ -1.48
SCN10A-201ENST00000449082 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
SCN10A-201ENST00000449082 BRCA2P51587 3418 aa5.81□□□□□ -1.48
SCN10A-201ENST00000449082 LAMA3Q16787 3333 aa5.8□□□□□ -1.48
SCN10A-201ENST00000449082 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
SCN10A-201ENST00000449082 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
SCN10A-201ENST00000449082 DSPP15924 2871 aaKnown RBP5.78□□□□□ -1.48
SCN10A-201ENST00000449082 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
SCN10A-201ENST00000449082 WDFY4Q6ZS81 3184 aa5.78□□□□□ -1.48
SCN10A-201ENST00000449082 ITPR2Q14571 2701 aa5.77□□□□□ -1.49
SCN10A-201ENST00000449082 KRTAP13-1Q8IUC0 172 aa5.77□□□□□ -1.49
SCN10A-201ENST00000449082 DMBT1Q9UGM3 2413 aaPredicted RBP5.76□□□□□ -1.49
SCN10A-201ENST00000449082 KMT2BQ9UMN6 2715 aaPredicted RBP5.74□□□□□ -1.49
SCN10A-201ENST00000449082 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
SCN10A-201ENST00000449082 NSD1Q96L73 2696 aaPredicted RBP5.73□□□□□ -1.49
SCN10A-201ENST00000449082 UBR5O95071 2799 aaPredicted RBP5.72□□□□□ -1.49
SCN10A-201ENST00000449082 A8MUU9 505 aa5.72□□□□□ -1.49
SCN10A-201ENST00000449082 PRUNE2Q8WUY3 3088 aa5.71□□□□□ -1.5
SCN10A-201ENST00000449082 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
SCN10A-201ENST00000449082 CDH23Q9H251 3354 aa5.69□□□□□ -1.5
SCN10A-201ENST00000449082 STAB2Q8WWQ8 2551 aa5.67□□□□□ -1.5
SCN10A-201ENST00000449082 MAP1AP78559 2803 aaPredicted RBP5.67□□□□□ -1.5
SCN10A-201ENST00000449082 TRIOO75962 3097 aa5.67□□□□□ -1.5
SCN10A-201ENST00000449082 LAMA2P24043 3122 aaKnown RBP5.67□□□□□ -1.5
SCN10A-201ENST00000449082 FRYQ5TBA9 3013 aa5.65□□□□□ -1.51
SCN10A-201ENST00000449082 XIRP2A4UGR9 3374 aa5.65□□□□□ -1.51
SCN10A-201ENST00000449082 ITPR1Q14643 2758 aa5.62□□□□□ -1.51
SCN10A-201ENST00000449082 UNC80Q8N2C7 3258 aa5.61□□□□□ -1.51
SCN10A-201ENST00000449082 A8MU10 97 aa5.6□□□□□ -1.51
SCN10A-201ENST00000449082 VPS13AQ96RL7 3174 aa5.58□□□□□ -1.52
SCN10A-201ENST00000449082 HIVEP1P15822 2718 aa5.54□□□□□ -1.52
SCN10A-201ENST00000449082 SZT2Q5T011 3432 aa5.54□□□□□ -1.52
SCN10A-201ENST00000449082 TNP1P09430 55 aa5.52□□□□□ -1.53
SCN10A-201ENST00000449082 UTP20O75691 2785 aaKnown RBP5.51□□□□□ -1.53
SCN10A-201ENST00000449082 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
SCN10A-201ENST00000449082 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
SCN10A-201ENST00000449082 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
SCN10A-201ENST00000449082 DNAH14Q0VDD8 3507 aa5.51□□□□□ -1.53
SCN10A-201ENST00000449082 FLNCQ14315 2725 aa5.5□□□□□ -1.53
SCN10A-201ENST00000449082 XP32Q5T750 250 aa5.5□□□□□ -1.53
SCN10A-201ENST00000449082 TACC2O95359 2948 aa5.49□□□□□ -1.53
SCN10A-201ENST00000449082 ATMQ13315 3056 aa5.48□□□□□ -1.53
SCN10A-201ENST00000449082 KALRNO60229 2985 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms