RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 A0A0B4J2C4 111 aa7.04□□□□□ -1.28
PRPF40A-203ENST00000448428 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
PRPF40A-203ENST00000448428 CEND1Q8N111 149 aa7.04□□□□□ -1.28
PRPF40A-203ENST00000448428 Q5XG85 94 aa7.03□□□□□ -1.28
PRPF40A-203ENST00000448428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.03□□□□□ -1.28
PRPF40A-203ENST00000448428 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
PRPF40A-203ENST00000448428 F8WEM9 126 aa7.02□□□□□ -1.29
PRPF40A-203ENST00000448428 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
PRPF40A-203ENST00000448428 MUC2Q02817 5179 aa7.02□□□□□ -1.29
PRPF40A-203ENST00000448428 OCIAD2Q56VL3 154 aa7.01□□□□□ -1.29
PRPF40A-203ENST00000448428 XP32Q5T750 250 aa7.01□□□□□ -1.29
PRPF40A-203ENST00000448428 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
PRPF40A-203ENST00000448428 FXYD2P54710 66 aa7□□□□□ -1.29
PRPF40A-203ENST00000448428 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
PRPF40A-203ENST00000448428 C1orf195Q5TG92 126 aa7□□□□□ -1.29
PRPF40A-203ENST00000448428 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
PRPF40A-203ENST00000448428 H0YGX0 51 aa6.99□□□□□ -1.29
PRPF40A-203ENST00000448428 PPDPFLQ8WWR9 84 aa6.99□□□□□ -1.29
PRPF40A-203ENST00000448428 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
PRPF40A-203ENST00000448428 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
PRPF40A-203ENST00000448428 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 A6NJY4 79 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 Q6JHZ5 121 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 IGFL1Q6UW32 110 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 SNHG12Q9BXW3 62 aa6.98□□□□□ -1.29
PRPF40A-203ENST00000448428 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
PRPF40A-203ENST00000448428 SNCGO76070 127 aa6.96□□□□□ -1.3
PRPF40A-203ENST00000448428 TCL1BO95988 128 aa6.96□□□□□ -1.3
PRPF40A-203ENST00000448428 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
PRPF40A-203ENST00000448428 HSD52Q0P140 79 aa6.95□□□□□ -1.3
PRPF40A-203ENST00000448428 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
PRPF40A-203ENST00000448428 H3BUT2 72 aa6.94□□□□□ -1.3
PRPF40A-203ENST00000448428 TRIAP1O43715 76 aa6.93□□□□□ -1.3
PRPF40A-203ENST00000448428 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-203ENST00000448428 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-203ENST00000448428 UQCR10Q9UDW1 63 aa6.92□□□□□ -1.3
PRPF40A-203ENST00000448428 A0A1B0GX51 115 aa6.91□□□□□ -1.3
PRPF40A-203ENST00000448428 K7ERJ3 54 aa6.91□□□□□ -1.3
PRPF40A-203ENST00000448428 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
PRPF40A-203ENST00000448428 FABP2P12104 132 aa6.88□□□□□ -1.31
PRPF40A-203ENST00000448428 PSMB2P49721 201 aa6.88□□□□□ -1.31
PRPF40A-203ENST00000448428 H3BMG7 143 aa6.87□□□□□ -1.31
PRPF40A-203ENST00000448428 GHRHP01286 108 aa6.87□□□□□ -1.31
PRPF40A-203ENST00000448428 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
PRPF40A-203ENST00000448428 Q6Q795 121 aa6.86□□□□□ -1.31
PRPF40A-203ENST00000448428 TEN1Q86WV5 123 aa6.86□□□□□ -1.31
PRPF40A-203ENST00000448428 LST1O00453 97 aa6.84□□□□□ -1.31
PRPF40A-203ENST00000448428 COX6CP09669 75 aa6.84□□□□□ -1.31
PRPF40A-203ENST00000448428 DNAL4O96015 105 aa6.83□□□□□ -1.32
PRPF40A-203ENST00000448428 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
PRPF40A-203ENST00000448428 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
PRPF40A-203ENST00000448428 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
PRPF40A-203ENST00000448428 A0A087WSZ3 146 aa6.8□□□□□ -1.32
PRPF40A-203ENST00000448428 A0A1W2PNM2 257 aa6.8□□□□□ -1.32
PRPF40A-203ENST00000448428 H3BQ85 93 aa6.8□□□□□ -1.32
PRPF40A-203ENST00000448428 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
PRPF40A-203ENST00000448428 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
PRPF40A-203ENST00000448428 ANKRD29Q8N6D5 301 aa6.79□□□□□ -1.32
PRPF40A-203ENST00000448428 OBSCN-AS1Q96MR7 158 aa6.79□□□□□ -1.32
PRPF40A-203ENST00000448428 A0A1B0GV72 72 aa6.78□□□□□ -1.32
PRPF40A-203ENST00000448428 TRACP01848 142 aa6.78□□□□□ -1.32
PRPF40A-203ENST00000448428 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
PRPF40A-203ENST00000448428 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
PRPF40A-203ENST00000448428 Q96NJ1 140 aa6.77□□□□□ -1.33
PRPF40A-203ENST00000448428 SMIM6P0DI80 62 aa6.75□□□□□ -1.33
PRPF40A-203ENST00000448428 UBE2V1Q13404 147 aa6.75□□□□□ -1.33
PRPF40A-203ENST00000448428 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
PRPF40A-203ENST00000448428 M0R143 59 aa6.73□□□□□ -1.33
PRPF40A-203ENST00000448428 Q75L30 129 aa6.73□□□□□ -1.33
PRPF40A-203ENST00000448428 CCKP06307 115 aa6.72□□□□□ -1.33
PRPF40A-203ENST00000448428 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.34
PRPF40A-203ENST00000448428 NAA38Q9BRA0 125 aaKnown RBP6.71□□□□□ -1.34
PRPF40A-203ENST00000448428 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
PRPF40A-203ENST00000448428 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
PRPF40A-203ENST00000448428 RBM3P98179 157 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-203ENST00000448428 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
PRPF40A-203ENST00000448428 DSCR10P59022 87 aa6.68□□□□□ -1.34
PRPF40A-203ENST00000448428 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
PRPF40A-203ENST00000448428 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
PRPF40A-203ENST00000448428 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
PRPF40A-203ENST00000448428 LOC105371267A0A1B0GV96 52 aa6.67□□□□□ -1.34
PRPF40A-203ENST00000448428 A8MUU9 505 aa6.67□□□□□ -1.34
PRPF40A-203ENST00000448428 MT1HP80294 61 aa6.67□□□□□ -1.34
PRPF40A-203ENST00000448428 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
PRPF40A-203ENST00000448428 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
PRPF40A-203ENST00000448428 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
PRPF40A-203ENST00000448428 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
PRPF40A-203ENST00000448428 VPS25Q9BRG1 176 aa6.66□□□□□ -1.34
PRPF40A-203ENST00000448428 LINC00313P59037 77 aa6.65□□□□□ -1.34
PRPF40A-203ENST00000448428 C9JAW5 83 aa6.64□□□□□ -1.35
PRPF40A-203ENST00000448428 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
PRPF40A-203ENST00000448428 BATFQ16520 125 aa6.62□□□□□ -1.35
PRPF40A-203ENST00000448428 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
PRPF40A-203ENST00000448428 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
PRPF40A-203ENST00000448428 IGHV6-1A0A0B4J1U7 121 aa6.59□□□□□ -1.35
PRPF40A-203ENST00000448428 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
PRPF40A-203ENST00000448428 Q6ZQT0 140 aa6.59□□□□□ -1.35
PRPF40A-203ENST00000448428 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
PRPF40A-203ENST00000448428 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms