RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 TSTD3H0UI37 97 aa12.65□□□□□ -0.38
APOE-204ENST00000446996 M0R143 59 aa12.64□□□□□ -0.39
APOE-204ENST00000446996 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
APOE-204ENST00000446996 K7ERJ3 54 aa12.62□□□□□ -0.39
APOE-204ENST00000446996 TRIAP1O43715 76 aa12.62□□□□□ -0.39
APOE-204ENST00000446996 COX6CP09669 75 aa12.6□□□□□ -0.39
APOE-204ENST00000446996 FAM218AQ96MZ4 157 aa12.59□□□□□ -0.39
APOE-204ENST00000446996 GHRHP01286 108 aa12.58□□□□□ -0.4
APOE-204ENST00000446996 PSMB2P49721 201 aa12.58□□□□□ -0.4
APOE-204ENST00000446996 PRR4Q16378 134 aa12.58□□□□□ -0.4
APOE-204ENST00000446996 CD164Q04900 197 aa12.57□□□□□ -0.4
APOE-204ENST00000446996 F8WEM9 126 aa12.55□□□□□ -0.4
APOE-204ENST00000446996 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
APOE-204ENST00000446996 SNHG12Q9BXW3 62 aa12.52□□□□□ -0.41
APOE-204ENST00000446996 Q6JHZ5 121 aa12.51□□□□□ -0.41
APOE-204ENST00000446996 FP248Q71RG6 208 aaPredicted RBP12.51□□□□□ -0.41
APOE-204ENST00000446996 H3BQ85 93 aa12.5□□□□□ -0.41
APOE-204ENST00000446996 CLEC2BQ92478 149 aa12.5□□□□□ -0.41
APOE-204ENST00000446996 RETNLBQ9BQ08 111 aa12.5□□□□□ -0.41
APOE-204ENST00000446996 RNF213Q63HN8 5207 aa12.49□□□□□ -0.41
APOE-204ENST00000446996 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
APOE-204ENST00000446996 DNAL4O96015 105 aa12.47□□□□□ -0.41
APOE-204ENST00000446996 SCGB1C2P0DMR2 95 aa12.46□□□□□ -0.41
APOE-204ENST00000446996 Q5XG85 94 aa12.45□□□□□ -0.42
APOE-204ENST00000446996 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
APOE-204ENST00000446996 TRACP01848 142 aa12.44□□□□□ -0.42
APOE-204ENST00000446996 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
APOE-204ENST00000446996 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
APOE-204ENST00000446996 ORMDL1Q9P0S3 153 aa12.43□□□□□ -0.42
APOE-204ENST00000446996 LST1O00453 97 aa12.42□□□□□ -0.42
APOE-204ENST00000446996 LPAP08519 4548 aa12.4□□□□□ -0.42
APOE-204ENST00000446996 TPRXLQ17RH7 258 aa12.4□□□□□ -0.42
APOE-204ENST00000446996 IGFL1Q6UW32 110 aa12.4□□□□□ -0.42
APOE-204ENST00000446996 TMEM256-PLSCR3K7ERE1 68 aa12.39□□□□□ -0.43
APOE-204ENST00000446996 FABP2P12104 132 aa12.39□□□□□ -0.43
APOE-204ENST00000446996 A0A0G2JQZ4 141 aa12.38□□□□□ -0.43
APOE-204ENST00000446996 BATFQ16520 125 aa12.36□□□□□ -0.43
APOE-204ENST00000446996 H3BMG7 143 aa12.34□□□□□ -0.43
APOE-204ENST00000446996 H3BUT2 72 aa12.34□□□□□ -0.43
APOE-204ENST00000446996 LYRM7Q5U5X0 104 aa12.34□□□□□ -0.43
APOE-204ENST00000446996 TCL1BO95988 128 aa12.33□□□□□ -0.44
APOE-204ENST00000446996 UBE2V1Q13404 147 aa12.33□□□□□ -0.44
APOE-204ENST00000446996 Q6Q795 121 aa12.33□□□□□ -0.44
APOE-204ENST00000446996 TRBV7-7A0A0K0K1E9 115 aa12.32□□□□□ -0.44
APOE-204ENST00000446996 ATXN8Q156A1 80 aa12.31□□□□□ -0.44
APOE-204ENST00000446996 ASB16-AS1Q495Z4 193 aa12.3□□□□□ -0.44
APOE-204ENST00000446996 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
APOE-204ENST00000446996 KRTAP13-3Q3SY46 172 aa12.28□□□□□ -0.44
APOE-204ENST00000446996 TEN1Q86WV5 123 aa12.28□□□□□ -0.44
APOE-204ENST00000446996 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
APOE-204ENST00000446996 C9orf118A6NHY6 69 aa12.27□□□□□ -0.45
APOE-204ENST00000446996 CDIP1Q9H305 208 aa12.27□□□□□ -0.45
APOE-204ENST00000446996 C1orf195Q5TG92 126 aa12.26□□□□□ -0.45
APOE-204ENST00000446996 TAX1BP3O14907 124 aa12.25□□□□□ -0.45
APOE-204ENST00000446996 BAALC-AS2P0C853 105 aa12.24□□□□□ -0.45
APOE-204ENST00000446996 ANKRD29Q8N6D5 301 aa12.23□□□□□ -0.45
APOE-204ENST00000446996 SS18L2Q9UHA2 77 aa12.21□□□□□ -0.45
APOE-204ENST00000446996 A0A1W2PNM2 257 aa12.18□□□□□ -0.46
APOE-204ENST00000446996 A0A1W2PPM0 123 aa12.18□□□□□ -0.46
APOE-204ENST00000446996 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
APOE-204ENST00000446996 TRBV7-4A0A0J9YYF1 115 aa12.17□□□□□ -0.46
APOE-204ENST00000446996 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.46
APOE-204ENST00000446996 JMJD7-PLA2G4BH0Y9G9 81 aa12.13□□□□□ -0.47
APOE-204ENST00000446996 DSCR8Q96T75 97 aa12.13□□□□□ -0.47
APOE-204ENST00000446996 A0A087WSZ3 146 aa12.12□□□□□ -0.47
APOE-204ENST00000446996 A0A1B0GV72 72 aa12.1□□□□□ -0.47
APOE-204ENST00000446996 C9JAW5 83 aa12.1□□□□□ -0.47
APOE-204ENST00000446996 CCKP06307 115 aa12.1□□□□□ -0.47
APOE-204ENST00000446996 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
APOE-204ENST00000446996 XP32Q5T750 250 aa12.08□□□□□ -0.48
APOE-204ENST00000446996 C21orf62-AS1Q17RA5 79 aa12.07□□□□□ -0.48
APOE-204ENST00000446996 H3BT86 120 aa12.06□□□□□ -0.48
APOE-204ENST00000446996 PDE6GP18545 87 aa12.05□□□□□ -0.48
APOE-204ENST00000446996 PCP4L1A6NKN8 68 aa12.04□□□□□ -0.48
APOE-204ENST00000446996 MUC2Q02817 5179 aa12.04□□□□□ -0.48
APOE-204ENST00000446996 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
APOE-204ENST00000446996 SPCS1Q9Y6A9 102 aa12.03□□□□□ -0.48
APOE-204ENST00000446996 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
APOE-204ENST00000446996 C9orf92A6NGG3 77 aa12.02□□□□□ -0.49
APOE-204ENST00000446996 A0A1B0GW54 56 aa12.01□□□□□ -0.49
APOE-204ENST00000446996 SEC61BP60468 96 aaKnown RBP12.01□□□□□ -0.49
APOE-204ENST00000446996 Q96NJ1 140 aa12.01□□□□□ -0.49
APOE-204ENST00000446996 Q6ZQT0 140 aa11.99□□□□□ -0.49
APOE-204ENST00000446996 VPS25Q9BRG1 176 aa11.98□□□□□ -0.49
APOE-204ENST00000446996 LINC00472Q9H8W2 130 aa11.95□□□□□ -0.5
APOE-204ENST00000446996 C14orf132Q9NPU4 83 aa11.93□□□□□ -0.5
APOE-204ENST00000446996 K7EP34 96 aa11.91□□□□□ -0.5
APOE-204ENST00000446996 MTURNQ8N3F0 131 aa11.9□□□□□ -0.5
APOE-204ENST00000446996 IGKV4-1P06312 121 aa11.89□□□□□ -0.51
APOE-204ENST00000446996 RPL37P61927 97 aaKnown RBP11.86□□□□□ -0.51
APOE-204ENST00000446996 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
APOE-204ENST00000446996 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
APOE-204ENST00000446996 SMCPP49901 116 aaPredicted RBP11.85□□□□□ -0.51
APOE-204ENST00000446996 J3KT08 172 aa11.84□□□□□ -0.51
APOE-204ENST00000446996 PRO0461Q9UI25 63 aa11.84□□□□□ -0.51
APOE-204ENST00000446996 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
APOE-204ENST00000446996 DEFB116Q30KQ4 102 aa11.8□□□□□ -0.52
APOE-204ENST00000446996 Q75L30 129 aa11.8□□□□□ -0.52
APOE-204ENST00000446996 PCOTHQ58A44 107 aa11.79□□□□□ -0.52
APOE-204ENST00000446996 LINC00313P59037 77 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms