RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CASC10Q5T4H9 136 aa11.76□□□□□ -0.53
SHANK3-203ENST00000445220 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
SHANK3-203ENST00000445220 HRES1P13985 223 aa11.76□□□□□ -0.53
SHANK3-203ENST00000445220 TRANK1O15050 2925 aa11.75□□□□□ -0.53
SHANK3-203ENST00000445220 A0A1B0GU33 70 aa11.75□□□□□ -0.53
SHANK3-203ENST00000445220 CR1P17927 2039 aa11.74□□□□□ -0.53
SHANK3-203ENST00000445220 MKI67P46013 3256 aaKnown RBP11.72□□□□□ -0.53
SHANK3-203ENST00000445220 MMP24-AS1A0A0U1RRL7 71 aa11.7□□□□□ -0.54
SHANK3-203ENST00000445220 SPINK7P58062 85 aa11.68□□□□□ -0.54
SHANK3-203ENST00000445220 CSAG1Q6PB30 78 aa11.67□□□□□ -0.54
SHANK3-203ENST00000445220 DSPP15924 2871 aaKnown RBP11.66□□□□□ -0.54
SHANK3-203ENST00000445220 Q8NDZ9 215 aa11.62□□□□□ -0.55
SHANK3-203ENST00000445220 BRCA2P51587 3418 aa11.61□□□□□ -0.55
SHANK3-203ENST00000445220 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.56
SHANK3-203ENST00000445220 DMAC1Q96GE9 116 aa11.58□□□□□ -0.56
SHANK3-203ENST00000445220 PRUNE2Q8WUY3 3088 aa11.57□□□□□ -0.56
SHANK3-203ENST00000445220 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
SHANK3-203ENST00000445220 SPRR1AP35321 89 aa11.57□□□□□ -0.56
SHANK3-203ENST00000445220 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
SHANK3-203ENST00000445220 KRTAP21-3Q3LHN1 58 aa11.53□□□□□ -0.56
SHANK3-203ENST00000445220 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.56
SHANK3-203ENST00000445220 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
SHANK3-203ENST00000445220 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
SHANK3-203ENST00000445220 A0A0A0MQY5 61 aa11.48□□□□□ -0.57
SHANK3-203ENST00000445220 AKAP13Q12802 2813 aa11.47□□□□□ -0.57
SHANK3-203ENST00000445220 ASB16-AS1Q495Z4 193 aa11.47□□□□□ -0.57
SHANK3-203ENST00000445220 SPRR1BP22528 89 aa11.45□□□□□ -0.58
SHANK3-203ENST00000445220 Q5W150 140 aa11.45□□□□□ -0.58
SHANK3-203ENST00000445220 SMR3BP02814 79 aaPredicted RBP11.44□□□□□ -0.58
SHANK3-203ENST00000445220 ZCCHC13Q8WW36 166 aaKnown RBP11.4□□□□□ -0.58
SHANK3-203ENST00000445220 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
SHANK3-203ENST00000445220 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
SHANK3-203ENST00000445220 UNC80Q8N2C7 3258 aa11.37□□□□□ -0.59
SHANK3-203ENST00000445220 TNP2Q05952 138 aa11.36□□□□□ -0.59
SHANK3-203ENST00000445220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.36□□□□□ -0.59
SHANK3-203ENST00000445220 CFAP54Q96N23 3096 aa11.33□□□□□ -0.6
SHANK3-203ENST00000445220 CAMK2N1Q7Z7J9 78 aa11.33□□□□□ -0.6
SHANK3-203ENST00000445220 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
SHANK3-203ENST00000445220 ROMO1P60602 79 aa11.3□□□□□ -0.6
SHANK3-203ENST00000445220 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
SHANK3-203ENST00000445220 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
SHANK3-203ENST00000445220 TRIOO75962 3097 aa11.28□□□□□ -0.6
SHANK3-203ENST00000445220 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
SHANK3-203ENST00000445220 Q6ZR54 194 aa11.26□□□□□ -0.61
SHANK3-203ENST00000445220 LCE6AA0A183 80 aa11.26□□□□□ -0.61
SHANK3-203ENST00000445220 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
SHANK3-203ENST00000445220 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
SHANK3-203ENST00000445220 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
SHANK3-203ENST00000445220 A6NN06 94 aa11.24□□□□□ -0.61
SHANK3-203ENST00000445220 SPATA8Q6RVD6 105 aa11.19□□□□□ -0.62
SHANK3-203ENST00000445220 Q6ZSA8 131 aa11.19□□□□□ -0.62
SHANK3-203ENST00000445220 S4R3F8 94 aa11.19□□□□□ -0.62
SHANK3-203ENST00000445220 H1FX-AS1Q4G0G2 97 aa11.18□□□□□ -0.62
SHANK3-203ENST00000445220 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
SHANK3-203ENST00000445220 REV3LO60673 3130 aa11.15□□□□□ -0.62
SHANK3-203ENST00000445220 FLNCQ14315 2725 aa11.13□□□□□ -0.63
SHANK3-203ENST00000445220 SZT2Q5T011 3432 aa11.13□□□□□ -0.63
SHANK3-203ENST00000445220 KRTAP4-16G5E9R7 235 aaPredicted RBP11.11□□□□□ -0.63
SHANK3-203ENST00000445220 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
SHANK3-203ENST00000445220 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.63
SHANK3-203ENST00000445220 COL6A3P12111 3177 aa11.08□□□□□ -0.64
SHANK3-203ENST00000445220 KRTAP1-5Q9BYS1 174 aa11.07□□□□□ -0.64
SHANK3-203ENST00000445220 HIVEP1P15822 2718 aa11.06□□□□□ -0.64
SHANK3-203ENST00000445220 ITPR2Q14571 2701 aa11.05□□□□□ -0.64
SHANK3-203ENST00000445220 R4GN34 69 aa11.03□□□□□ -0.64
SHANK3-203ENST00000445220 TENM4Q6N022 2769 aa11.02□□□□□ -0.64
SHANK3-203ENST00000445220 MAP1AP78559 2803 aaPredicted RBP11.02□□□□□ -0.65
SHANK3-203ENST00000445220 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.65
SHANK3-203ENST00000445220 VPS13AQ96RL7 3174 aa10.99□□□□□ -0.65
SHANK3-203ENST00000445220 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
SHANK3-203ENST00000445220 FRYLO94915 3013 aa10.96□□□□□ -0.66
SHANK3-203ENST00000445220 STAB2Q8WWQ8 2551 aa10.96□□□□□ -0.66
SHANK3-203ENST00000445220 ADM2Q7Z4H4 148 aa10.93□□□□□ -0.66
SHANK3-203ENST00000445220 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
SHANK3-203ENST00000445220 A8MU10 97 aa10.91□□□□□ -0.66
SHANK3-203ENST00000445220 LAMA1P25391 3075 aa10.9□□□□□ -0.66
SHANK3-203ENST00000445220 ITPR1Q14643 2758 aa10.84□□□□□ -0.67
SHANK3-203ENST00000445220 VCANP13611 3396 aa10.84□□□□□ -0.67
SHANK3-203ENST00000445220 A0A087X002 238 aa10.84□□□□□ -0.67
SHANK3-203ENST00000445220 NOTCH2NLQ7Z3S9 236 aa10.84□□□□□ -0.67
SHANK3-203ENST00000445220 DMBT1Q9UGM3 2413 aaPredicted RBP10.84□□□□□ -0.67
SHANK3-203ENST00000445220 FRYQ5TBA9 3013 aa10.83□□□□□ -0.68
SHANK3-203ENST00000445220 DNAH14Q0VDD8 3507 aa10.83□□□□□ -0.68
SHANK3-203ENST00000445220 M0QZ58 72 aa10.83□□□□□ -0.68
SHANK3-203ENST00000445220 KRTAP10-1P60331 282 aa10.82□□□□□ -0.68
SHANK3-203ENST00000445220 PANO1I0J062 215 aa10.81□□□□□ -0.68
SHANK3-203ENST00000445220 Q5VSD8 79 aa10.81□□□□□ -0.68
SHANK3-203ENST00000445220 FREM2Q5SZK8 3169 aa10.78□□□□□ -0.68
SHANK3-203ENST00000445220 COL12A1Q99715 3063 aa10.78□□□□□ -0.68
SHANK3-203ENST00000445220 KRTAP10-2P60368 255 aa10.77□□□□□ -0.68
SHANK3-203ENST00000445220 NDUFAF8A1L188 74 aa10.77□□□□□ -0.69
SHANK3-203ENST00000445220 DMXL2Q8TDJ6 3036 aa10.75□□□□□ -0.69
SHANK3-203ENST00000445220 CELSR3Q9NYQ7 3312 aa10.75□□□□□ -0.69
SHANK3-203ENST00000445220 TACC2O95359 2948 aa10.74□□□□□ -0.69
SHANK3-203ENST00000445220 NBEAL2Q6ZNJ1 2754 aa10.72□□□□□ -0.69
SHANK3-203ENST00000445220 ATMQ13315 3056 aa10.71□□□□□ -0.69
SHANK3-203ENST00000445220 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
SHANK3-203ENST00000445220 M0R2T5 61 aa10.67□□□□□ -0.7
SHANK3-203ENST00000445220 KMT2BQ9UMN6 2715 aaPredicted RBP10.65□□□□□ -0.7
SHANK3-203ENST00000445220 APCP25054 2843 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 304.9 ms