RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 HRCT1Q6UXD1 115 aa13.63□□□□□ -0.23
C9orf3-207ENST00000445181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-207ENST00000445181 F8WEM9 126 aa13.61□□□□□ -0.23
C9orf3-207ENST00000445181 SMIM6P0DI80 62 aa13.6□□□□□ -0.23
C9orf3-207ENST00000445181 K7ERJ3 54 aa13.59□□□□□ -0.23
C9orf3-207ENST00000445181 FP248Q71RG6 208 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-207ENST00000445181 TRIAP1O43715 76 aa13.55□□□□□ -0.24
C9orf3-207ENST00000445181 PSMB2P49721 201 aa13.55□□□□□ -0.24
C9orf3-207ENST00000445181 FAM218AQ96MZ4 157 aa13.55□□□□□ -0.24
C9orf3-207ENST00000445181 LIMD2Q9BT23 127 aa13.55□□□□□ -0.24
C9orf3-207ENST00000445181 PPDPFLQ8WWR9 84 aa13.54□□□□□ -0.24
C9orf3-207ENST00000445181 CD164Q04900 197 aa13.53□□□□□ -0.24
C9orf3-207ENST00000445181 SNHG12Q9BXW3 62 aa13.53□□□□□ -0.24
C9orf3-207ENST00000445181 TPRXLQ17RH7 258 aa13.52□□□□□ -0.25
C9orf3-207ENST00000445181 A0A0G2JQZ4 141 aa13.51□□□□□ -0.25
C9orf3-207ENST00000445181 OCIAD2Q56VL3 154 aa13.51□□□□□ -0.25
C9orf3-207ENST00000445181 CDIP1Q9H305 208 aa13.5□□□□□ -0.25
C9orf3-207ENST00000445181 A0A1B0GX51 115 aa13.48□□□□□ -0.25
C9orf3-207ENST00000445181 COX6CP09669 75 aa13.48□□□□□ -0.25
C9orf3-207ENST00000445181 CLEC2BQ92478 149 aa13.47□□□□□ -0.25
C9orf3-207ENST00000445181 LOC105371267A0A1B0GV96 52 aa13.46□□□□□ -0.25
C9orf3-207ENST00000445181 Q6JHZ5 121 aa13.45□□□□□ -0.26
C9orf3-207ENST00000445181 GHRHP01286 108 aa13.44□□□□□ -0.26
C9orf3-207ENST00000445181 IGLV8-61A0A075B6I0 122 aa13.43□□□□□ -0.26
C9orf3-207ENST00000445181 M0R143 59 aa13.43□□□□□ -0.26
C9orf3-207ENST00000445181 TSTD3H0UI37 97 aa13.42□□□□□ -0.26
C9orf3-207ENST00000445181 DNAL4O96015 105 aa13.42□□□□□ -0.26
C9orf3-207ENST00000445181 IGFL1Q6UW32 110 aa13.4□□□□□ -0.26
C9orf3-207ENST00000445181 H3BUT2 72 aa13.39□□□□□ -0.27
C9orf3-207ENST00000445181 SCGB1C2P0DMR2 95 aa13.39□□□□□ -0.27
C9orf3-207ENST00000445181 FABP2P12104 132 aa13.39□□□□□ -0.27
C9orf3-207ENST00000445181 KRTAP13-3Q3SY46 172 aa13.38□□□□□ -0.27
C9orf3-207ENST00000445181 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
C9orf3-207ENST00000445181 Q5XG85 94 aa13.37□□□□□ -0.27
C9orf3-207ENST00000445181 TCL1BO95988 128 aa13.35□□□□□ -0.27
C9orf3-207ENST00000445181 ORMDL1Q9P0S3 153 aa13.35□□□□□ -0.27
C9orf3-207ENST00000445181 A0A0U1RQV1 116 aa13.34□□□□□ -0.27
C9orf3-207ENST00000445181 MUC2Q02817 5179 aa13.34□□□□□ -0.27
C9orf3-207ENST00000445181 TRBV7-7A0A0K0K1E9 115 aa13.31□□□□□ -0.28
C9orf3-207ENST00000445181 H3BMG7 143 aa13.31□□□□□ -0.28
C9orf3-207ENST00000445181 H3BQ85 93 aa13.31□□□□□ -0.28
C9orf3-207ENST00000445181 C1orf195Q5TG92 126 aa13.29□□□□□ -0.28
C9orf3-207ENST00000445181 TRACP01848 142 aa13.27□□□□□ -0.29
C9orf3-207ENST00000445181 TMEM256-PLSCR3K7ERE1 68 aa13.26□□□□□ -0.29
C9orf3-207ENST00000445181 LST1O00453 97 aa13.26□□□□□ -0.29
C9orf3-207ENST00000445181 BATFQ16520 125 aa13.26□□□□□ -0.29
C9orf3-207ENST00000445181 NAA38Q9BRA0 125 aaKnown RBP13.24□□□□□ -0.29
C9orf3-207ENST00000445181 A0A1B0GV72 72 aa13.23□□□□□ -0.29
C9orf3-207ENST00000445181 MUC17Q685J3 4493 aa13.22□□□□□ -0.29
C9orf3-207ENST00000445181 TEN1Q86WV5 123 aa13.21□□□□□ -0.29
C9orf3-207ENST00000445181 C9orf92A6NGG3 77 aa13.2□□□□□ -0.3
C9orf3-207ENST00000445181 Q6Q795 121 aa13.2□□□□□ -0.3
C9orf3-207ENST00000445181 ASB16-AS1Q495Z4 193 aa13.19□□□□□ -0.3
C9orf3-207ENST00000445181 UBE2V1Q13404 147 aa13.17□□□□□ -0.3
C9orf3-207ENST00000445181 XP32Q5T750 250 aa13.17□□□□□ -0.3
C9orf3-207ENST00000445181 ANKRD29Q8N6D5 301 aa13.17□□□□□ -0.3
C9orf3-207ENST00000445181 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
C9orf3-207ENST00000445181 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
C9orf3-207ENST00000445181 LYRM7Q5U5X0 104 aa13.13□□□□□ -0.31
C9orf3-207ENST00000445181 A0A087WSZ3 146 aa13.12□□□□□ -0.31
C9orf3-207ENST00000445181 BAALC-AS2P0C853 105 aa13.12□□□□□ -0.31
C9orf3-207ENST00000445181 SEC61BP60468 96 aaKnown RBP13.12□□□□□ -0.31
C9orf3-207ENST00000445181 A0A1W2PNM2 257 aa13.1□□□□□ -0.31
C9orf3-207ENST00000445181 LCE2AQ5TA79 106 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-207ENST00000445181 RBM3P98179 157 aaKnown RBP13.06□□□□□ -0.32
C9orf3-207ENST00000445181 TRBV7-4A0A0J9YYF1 115 aa13.05□□□□□ -0.32
C9orf3-207ENST00000445181 CCKP06307 115 aa13.05□□□□□ -0.32
C9orf3-207ENST00000445181 DSCR8Q96T75 97 aa13.04□□□□□ -0.32
C9orf3-207ENST00000445181 TRBV20-1A0A075B6N2 111 aa13.03□□□□□ -0.32
C9orf3-207ENST00000445181 C9orf118A6NHY6 69 aa13.02□□□□□ -0.33
C9orf3-207ENST00000445181 VPS25Q9BRG1 176 aa13.02□□□□□ -0.33
C9orf3-207ENST00000445181 FAT4Q6V0I7 4981 aa13.01□□□□□ -0.33
C9orf3-207ENST00000445181 TAX1BP3O14907 124 aa13.01□□□□□ -0.33
C9orf3-207ENST00000445181 KRTAP4-1Q9BYQ7 146 aa12.97□□□□□ -0.33
C9orf3-207ENST00000445181 A0A1W2PPM0 123 aa12.96□□□□□ -0.33
C9orf3-207ENST00000445181 C9JAW5 83 aa12.96□□□□□ -0.33
C9orf3-207ENST00000445181 Q96NJ1 140 aa12.95□□□□□ -0.34
C9orf3-207ENST00000445181 JMJD7-PLA2G4BH0Y9G9 81 aa12.94□□□□□ -0.34
C9orf3-207ENST00000445181 OBSCN-AS1Q96MR7 158 aa12.94□□□□□ -0.34
C9orf3-207ENST00000445181 PCOTHQ58A44 107 aa12.93□□□□□ -0.34
C9orf3-207ENST00000445181 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
C9orf3-207ENST00000445181 RPL37P61927 97 aaKnown RBP12.89□□□□□ -0.35
C9orf3-207ENST00000445181 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
C9orf3-207ENST00000445181 COL5A1-AS1Q5SY13 56 aa12.87□□□□□ -0.35
C9orf3-207ENST00000445181 DEFB116Q30KQ4 102 aa12.85□□□□□ -0.35
C9orf3-207ENST00000445181 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
C9orf3-207ENST00000445181 C14orf132Q9NPU4 83 aa12.84□□□□□ -0.35
C9orf3-207ENST00000445181 LOC110117498A0A087WWA1 95 aa12.83□□□□□ -0.36
C9orf3-207ENST00000445181 PDE6GP18545 87 aa12.83□□□□□ -0.36
C9orf3-207ENST00000445181 Q6ZQT0 140 aa12.83□□□□□ -0.36
C9orf3-207ENST00000445181 KRTAP9-2Q9BYQ4 174 aa12.83□□□□□ -0.36
C9orf3-207ENST00000445181 LINC00472Q9H8W2 130 aa12.83□□□□□ -0.36
C9orf3-207ENST00000445181 H3BT86 120 aa12.82□□□□□ -0.36
C9orf3-207ENST00000445181 MTURNQ8N3F0 131 aa12.82□□□□□ -0.36
C9orf3-207ENST00000445181 SPCS1Q9Y6A9 102 aa12.82□□□□□ -0.36
C9orf3-207ENST00000445181 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
C9orf3-207ENST00000445181 DSCR10P59022 87 aa12.79□□□□□ -0.36
C9orf3-207ENST00000445181 Q75L30 129 aa12.77□□□□□ -0.37
C9orf3-207ENST00000445181 A0A1B0GW54 56 aa12.75□□□□□ -0.37
C9orf3-207ENST00000445181 LINC00313P59037 77 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms