RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 AKAP6Q13023 2319 aa1.68□□□□□ -2.14
R3HDM1-209ENST00000441871 SPRR1BP22528 89 aa1.68□□□□□ -2.14
R3HDM1-209ENST00000441871 S4R3F8 94 aa1.68□□□□□ -2.14
R3HDM1-209ENST00000441871 REV3LO60673 3130 aa1.68□□□□□ -2.14
R3HDM1-209ENST00000441871 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
R3HDM1-209ENST00000441871 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
R3HDM1-209ENST00000441871 ACACAQ13085 2346 aa1.66□□□□□ -2.14
R3HDM1-209ENST00000441871 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
R3HDM1-209ENST00000441871 CHD7Q9P2D1 2997 aa1.65□□□□□ -2.15
R3HDM1-209ENST00000441871 HIVEP2P31629 2446 aa1.64□□□□□ -2.15
R3HDM1-209ENST00000441871 DSPP15924 2871 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-209ENST00000441871 SPINK1P00995 79 aa1.63□□□□□ -2.15
R3HDM1-209ENST00000441871 LCE3EQ5T5B0 92 aa1.63□□□□□ -2.15
R3HDM1-209ENST00000441871 SPTBN1Q01082 2364 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-209ENST00000441871 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
R3HDM1-209ENST00000441871 MGAQ8IWI9 3026 aa1.62□□□□□ -2.15
R3HDM1-209ENST00000441871 NOP10Q9NPE3 64 aaKnown RBP1.62□□□□□ -2.15
R3HDM1-209ENST00000441871 DEFB119Q8N690 84 aa1.61□□□□□ -2.15
R3HDM1-209ENST00000441871 F8P00451 2351 aa1.61□□□□□ -2.15
R3HDM1-209ENST00000441871 WNK1Q9H4A3 2382 aa1.61□□□□□ -2.15
R3HDM1-209ENST00000441871 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
R3HDM1-209ENST00000441871 SPTA1P02549 2419 aa1.6□□□□□ -2.15
R3HDM1-209ENST00000441871 ABCA2Q9BZC7 2435 aa1.59□□□□□ -2.15
R3HDM1-209ENST00000441871 PRRC2CQ9Y520 2896 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-209ENST00000441871 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.15
R3HDM1-209ENST00000441871 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.16
R3HDM1-209ENST00000441871 ASH1LQ9NR48 2969 aaKnown RBP1.59□□□□□ -2.16
R3HDM1-209ENST00000441871 TENM2Q9NT68 2774 aa1.59□□□□□ -2.16
R3HDM1-209ENST00000441871 KRTAP10-10P60014 251 aa1.58□□□□□ -2.16
R3HDM1-209ENST00000441871 A0A0D9SG42 100 aa1.57□□□□□ -2.16
R3HDM1-209ENST00000441871 STATHP02808 62 aa1.57□□□□□ -2.16
R3HDM1-209ENST00000441871 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
R3HDM1-209ENST00000441871 ABCA12Q86UK0 2595 aa1.57□□□□□ -2.16
R3HDM1-209ENST00000441871 CEP290O15078 2479 aa1.56□□□□□ -2.16
R3HDM1-209ENST00000441871 APELAP0DMC3 54 aa1.56□□□□□ -2.16
R3HDM1-209ENST00000441871 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
R3HDM1-209ENST00000441871 CACNA1HO95180 2353 aa1.56□□□□□ -2.16
R3HDM1-209ENST00000441871 GVINP1Q7Z2Y8 2422 aa1.56□□□□□ -2.16
R3HDM1-209ENST00000441871 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
R3HDM1-209ENST00000441871 NBPF19A0A087WUL8 3843 aa1.53□□□□□ -2.16
R3HDM1-209ENST00000441871 KRTAP13-1Q8IUC0 172 aa1.53□□□□□ -2.16
R3HDM1-209ENST00000441871 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
R3HDM1-209ENST00000441871 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
R3HDM1-209ENST00000441871 TRANK1O15050 2925 aa1.53□□□□□ -2.17
R3HDM1-209ENST00000441871 OTOGQ6ZRI0 2925 aa1.52□□□□□ -2.17
R3HDM1-209ENST00000441871 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
R3HDM1-209ENST00000441871 RP1L1Q8IWN7 2480 aaPredicted RBP1.52□□□□□ -2.17
R3HDM1-209ENST00000441871 CCDC168Q8NDH2 2452 aa1.52□□□□□ -2.17
R3HDM1-209ENST00000441871 ZNF292O60281 2723 aa1.52□□□□□ -2.17
R3HDM1-209ENST00000441871 UBR5O95071 2799 aaPredicted RBP1.51□□□□□ -2.17
R3HDM1-209ENST00000441871 CELSR2Q9HCU4 2923 aa1.51□□□□□ -2.17
R3HDM1-209ENST00000441871 TTC28Q96AY4 2481 aa1.5□□□□□ -2.17
R3HDM1-209ENST00000441871 CREBBPQ92793 2442 aa1.5□□□□□ -2.17
R3HDM1-209ENST00000441871 CELSR1Q9NYQ6 3014 aa1.5□□□□□ -2.17
R3HDM1-209ENST00000441871 MEGF8Q7Z7M0 2845 aa1.5□□□□□ -2.17
R3HDM1-209ENST00000441871 EP300Q09472 2414 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-209ENST00000441871 H0YGG7 62 aa1.49□□□□□ -2.17
R3HDM1-209ENST00000441871 DEFB1P60022 68 aa1.49□□□□□ -2.17
R3HDM1-209ENST00000441871 SRRM2Q9UQ35 2752 aaKnown RBP1.49□□□□□ -2.17
R3HDM1-209ENST00000441871 PKD1L2Q7Z442 2459 aa1.48□□□□□ -2.17
R3HDM1-209ENST00000441871 NAV2Q8IVL1 2488 aa1.47□□□□□ -2.17
R3HDM1-209ENST00000441871 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
R3HDM1-209ENST00000441871 COX14Q96I36 57 aa1.47□□□□□ -2.17
R3HDM1-209ENST00000441871 VWFP04275 2813 aa1.46□□□□□ -2.18
R3HDM1-209ENST00000441871 COL6A3P12111 3177 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 BSNQ9UPA5 3926 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 H3BUX3 64 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 M0QZ58 72 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 AKAP9Q99996 3911 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 AKAP13Q12802 2813 aa1.45□□□□□ -2.18
R3HDM1-209ENST00000441871 NOTCH2Q04721 2471 aa1.44□□□□□ -2.18
R3HDM1-209ENST00000441871 J3QKU1 62 aa1.44□□□□□ -2.18
R3HDM1-209ENST00000441871 RHPN1-AS1Q9BWJ2 59 aa1.44□□□□□ -2.18
R3HDM1-209ENST00000441871 TNRC18O15417 2968 aaPredicted RBP1.44□□□□□ -2.18
R3HDM1-209ENST00000441871 WDR87Q6ZQQ6 2873 aa1.43□□□□□ -2.18
R3HDM1-209ENST00000441871 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
R3HDM1-209ENST00000441871 LYSTQ99698 3801 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 ZFHX4Q86UP3 3567 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 SACSQ9NZJ4 4579 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 HTN1P15515 57 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 MAP1BP46821 2468 aaKnown RBP1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 POLQO75417 2590 aa1.42□□□□□ -2.18
R3HDM1-209ENST00000441871 RANBP2P49792 3224 aaKnown RBP1.41□□□□□ -2.18
R3HDM1-209ENST00000441871 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
R3HDM1-209ENST00000441871 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
R3HDM1-209ENST00000441871 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
R3HDM1-209ENST00000441871 NCOR1O75376 2440 aa1.4□□□□□ -2.19
R3HDM1-209ENST00000441871 SETD2Q9BYW2 2564 aaPredicted RBP1.39□□□□□ -2.19
R3HDM1-209ENST00000441871 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
R3HDM1-209ENST00000441871 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
R3HDM1-209ENST00000441871 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 CHD6Q8TD26 2715 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 DEFB136Q30KP8 78 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 LCE3DQ9BYE3 92 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 CHD9Q3L8U1 2897 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 APC2O95996 2303 aa1.38□□□□□ -2.19
R3HDM1-209ENST00000441871 NBASA2RRP1 2371 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms