RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.13□□□□□ -0.63
SEMA3B-206ENST00000439487 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
SEMA3B-206ENST00000439487 TRIAP1O43715 76 aa11.12□□□□□ -0.63
SEMA3B-206ENST00000439487 HRCT1Q6UXD1 115 aa11.09□□□□□ -0.63
SEMA3B-206ENST00000439487 PSMB2P49721 201 aa11.08□□□□□ -0.64
SEMA3B-206ENST00000439487 SNCGO76070 127 aa11.07□□□□□ -0.64
SEMA3B-206ENST00000439487 RPS29P62273 56 aaKnown RBP11.07□□□□□ -0.64
SEMA3B-206ENST00000439487 A0A0G2JQZ4 141 aa11.06□□□□□ -0.64
SEMA3B-206ENST00000439487 F8WEM9 126 aa11.05□□□□□ -0.64
SEMA3B-206ENST00000439487 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
SEMA3B-206ENST00000439487 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
SEMA3B-206ENST00000439487 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
SEMA3B-206ENST00000439487 A0A1B0GX51 115 aa11.03□□□□□ -0.64
SEMA3B-206ENST00000439487 M0R143 59 aa11.03□□□□□ -0.64
SEMA3B-206ENST00000439487 PPDPFLQ8WWR9 84 aa11.03□□□□□ -0.64
SEMA3B-206ENST00000439487 COX6CP09669 75 aa11.02□□□□□ -0.65
SEMA3B-206ENST00000439487 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
SEMA3B-206ENST00000439487 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.65
SEMA3B-206ENST00000439487 CD164Q04900 197 aa11□□□□□ -0.65
SEMA3B-206ENST00000439487 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
SEMA3B-206ENST00000439487 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
SEMA3B-206ENST00000439487 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
SEMA3B-206ENST00000439487 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.65
SEMA3B-206ENST00000439487 H3BUT2 72 aa10.95□□□□□ -0.66
SEMA3B-206ENST00000439487 DNAL4O96015 105 aa10.95□□□□□ -0.66
SEMA3B-206ENST00000439487 Q6JHZ5 121 aa10.95□□□□□ -0.66
SEMA3B-206ENST00000439487 IGFL1Q6UW32 110 aa10.95□□□□□ -0.66
SEMA3B-206ENST00000439487 FABP2P12104 132 aa10.94□□□□□ -0.66
SEMA3B-206ENST00000439487 GHRHP01286 108 aa10.93□□□□□ -0.66
SEMA3B-206ENST00000439487 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
SEMA3B-206ENST00000439487 TPRXLQ17RH7 258 aa10.93□□□□□ -0.66
SEMA3B-206ENST00000439487 BATFQ16520 125 aa10.92□□□□□ -0.66
SEMA3B-206ENST00000439487 NAA38Q9BRA0 125 aaKnown RBP10.92□□□□□ -0.66
SEMA3B-206ENST00000439487 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
SEMA3B-206ENST00000439487 LST1O00453 97 aa10.89□□□□□ -0.67
SEMA3B-206ENST00000439487 Q5XG85 94 aa10.89□□□□□ -0.67
SEMA3B-206ENST00000439487 TRACP01848 142 aa10.88□□□□□ -0.67
SEMA3B-206ENST00000439487 CDIP1Q9H305 208 aa10.88□□□□□ -0.67
SEMA3B-206ENST00000439487 H3BMG7 143 aa10.87□□□□□ -0.67
SEMA3B-206ENST00000439487 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
SEMA3B-206ENST00000439487 H3BQ85 93 aa10.86□□□□□ -0.67
SEMA3B-206ENST00000439487 TRBV7-7A0A0K0K1E9 115 aa10.85□□□□□ -0.67
SEMA3B-206ENST00000439487 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
SEMA3B-206ENST00000439487 TCL1BO95988 128 aa10.83□□□□□ -0.68
SEMA3B-206ENST00000439487 C1orf195Q5TG92 126 aa10.83□□□□□ -0.68
SEMA3B-206ENST00000439487 A0A1B0GV72 72 aa10.82□□□□□ -0.68
SEMA3B-206ENST00000439487 KRTAP9-2Q9BYQ4 174 aa10.82□□□□□ -0.68
SEMA3B-206ENST00000439487 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
SEMA3B-206ENST00000439487 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
SEMA3B-206ENST00000439487 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
SEMA3B-206ENST00000439487 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.69
SEMA3B-206ENST00000439487 Q6Q795 121 aa10.77□□□□□ -0.69
SEMA3B-206ENST00000439487 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
SEMA3B-206ENST00000439487 TAX1BP3O14907 124 aa10.76□□□□□ -0.69
SEMA3B-206ENST00000439487 ASB16-AS1Q495Z4 193 aa10.76□□□□□ -0.69
SEMA3B-206ENST00000439487 ANKRD29Q8N6D5 301 aa10.76□□□□□ -0.69
SEMA3B-206ENST00000439487 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
SEMA3B-206ENST00000439487 C9orf118A6NHY6 69 aa10.74□□□□□ -0.69
SEMA3B-206ENST00000439487 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
SEMA3B-206ENST00000439487 C9orf92A6NGG3 77 aa10.72□□□□□ -0.69
SEMA3B-206ENST00000439487 A0A087WSZ3 146 aa10.71□□□□□ -0.69
SEMA3B-206ENST00000439487 KRTAP9-6A0A140TA67 174 aa10.71□□□□□ -0.69
SEMA3B-206ENST00000439487 FAT4Q6V0I7 4981 aa10.69□□□□□ -0.7
SEMA3B-206ENST00000439487 TRBV20-1A0A075B6N2 111 aa10.69□□□□□ -0.7
SEMA3B-206ENST00000439487 XP32Q5T750 250 aa10.69□□□□□ -0.7
SEMA3B-206ENST00000439487 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
SEMA3B-206ENST00000439487 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
SEMA3B-206ENST00000439487 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
SEMA3B-206ENST00000439487 CCKP06307 115 aa10.66□□□□□ -0.7
SEMA3B-206ENST00000439487 TRBV7-4A0A0J9YYF1 115 aa10.65□□□□□ -0.7
SEMA3B-206ENST00000439487 C9JAW5 83 aa10.65□□□□□ -0.7
SEMA3B-206ENST00000439487 MUC2Q02817 5179 aa10.65□□□□□ -0.71
SEMA3B-206ENST00000439487 DSCR8Q96T75 97 aa10.64□□□□□ -0.71
SEMA3B-206ENST00000439487 PCP4L1A6NKN8 68 aa10.62□□□□□ -0.71
SEMA3B-206ENST00000439487 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
SEMA3B-206ENST00000439487 COL5A1-AS1Q5SY13 56 aa10.61□□□□□ -0.71
SEMA3B-206ENST00000439487 Q96NJ1 140 aa10.6□□□□□ -0.71
SEMA3B-206ENST00000439487 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
SEMA3B-206ENST00000439487 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.72
SEMA3B-206ENST00000439487 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
SEMA3B-206ENST00000439487 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
SEMA3B-206ENST00000439487 H3BT86 120 aa10.53□□□□□ -0.72
SEMA3B-206ENST00000439487 Q6ZQT0 140 aa10.53□□□□□ -0.72
SEMA3B-206ENST00000439487 C14orf132Q9NPU4 83 aa10.53□□□□□ -0.72
SEMA3B-206ENST00000439487 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
SEMA3B-206ENST00000439487 OBSCN-AS1Q96MR7 158 aa10.52□□□□□ -0.73
SEMA3B-206ENST00000439487 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
SEMA3B-206ENST00000439487 DEFB116Q30KQ4 102 aa10.5□□□□□ -0.73
SEMA3B-206ENST00000439487 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
SEMA3B-206ENST00000439487 LINC00472Q9H8W2 130 aa10.5□□□□□ -0.73
SEMA3B-206ENST00000439487 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
SEMA3B-206ENST00000439487 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
SEMA3B-206ENST00000439487 PDE6GP18545 87 aa10.48□□□□□ -0.73
SEMA3B-206ENST00000439487 RPL37P61927 97 aaKnown RBP10.47□□□□□ -0.73
SEMA3B-206ENST00000439487 C21orf62-AS1Q17RA5 79 aa10.45□□□□□ -0.74
SEMA3B-206ENST00000439487 K7EP34 96 aa10.43□□□□□ -0.74
SEMA3B-206ENST00000439487 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
SEMA3B-206ENST00000439487 DSCR10P59022 87 aa10.43□□□□□ -0.74
SEMA3B-206ENST00000439487 A0A0U1RQV1 116 aa10.4□□□□□ -0.74
SEMA3B-206ENST00000439487 A0A1B0GW54 56 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms