RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
CAST-209ENST00000437034 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 C2CD3Q4AC94 2353 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 H0YAA0 97 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 KRTAP1-1Q07627 177 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 LELP1Q5T871 98 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 CELSR2Q9HCU4 2923 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 ABCA12Q86UK0 2595 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 GVQW2A0A096LPI5 108 aaPredicted RBP2.91□□□□□ -1.94
CAST-209ENST00000437034 H3BUA1 57 aa2.91□□□□□ -1.94
CAST-209ENST00000437034 NAV2Q8IVL1 2488 aa2.9□□□□□ -1.94
CAST-209ENST00000437034 LYNX1G3V0Z9 82 aa2.9□□□□□ -1.94
CAST-209ENST00000437034 AKAP6Q13023 2319 aa2.89□□□□□ -1.95
CAST-209ENST00000437034 ASPMQ8IZT6 3477 aa2.88□□□□□ -1.95
CAST-209ENST00000437034 DNAH7Q8WXX0 4024 aa2.88□□□□□ -1.95
CAST-209ENST00000437034 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
CAST-209ENST00000437034 KRTAP24-1Q3LI83 254 aa2.88□□□□□ -1.95
CAST-209ENST00000437034 DMXL2Q8TDJ6 3036 aa2.88□□□□□ -1.95
CAST-209ENST00000437034 DEFB1P60022 68 aa2.87□□□□□ -1.95
CAST-209ENST00000437034 UBE2DNLQ8IWF7 75 aa2.87□□□□□ -1.95
CAST-209ENST00000437034 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
CAST-209ENST00000437034 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
CAST-209ENST00000437034 ZNF469Q96JG9 3925 aaPredicted RBP2.87□□□□□ -1.95
CAST-209ENST00000437034 CFAP46Q8IYW2 2715 aa2.87□□□□□ -1.95
CAST-209ENST00000437034 CEP290O15078 2479 aa2.86□□□□□ -1.95
CAST-209ENST00000437034 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
CAST-209ENST00000437034 Q6ZSA8 131 aa2.86□□□□□ -1.95
CAST-209ENST00000437034 HTN1P15515 57 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 DEFB108BQ8NET1 73 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 LOC400499M0QZD8 3231 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 CELSR3Q9NYQ7 3312 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 NBASA2RRP1 2371 aa2.85□□□□□ -1.95
CAST-209ENST00000437034 FBN2P35556 2912 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 ABCA2Q9BZC7 2435 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 NBEAQ8NFP9 2946 aa2.84□□□□□ -1.95
CAST-209ENST00000437034 DCHS2Q6V1P9 2916 aa2.84□□□□□ -1.96
CAST-209ENST00000437034 INE1O15225 51 aa2.84□□□□□ -1.96
CAST-209ENST00000437034 IGKV2-30P06310 120 aa2.83□□□□□ -1.96
CAST-209ENST00000437034 PRKDCP78527 4128 aaKnown RBP2.83□□□□□ -1.96
CAST-209ENST00000437034 PRLHP81277 87 aa2.83□□□□□ -1.96
CAST-209ENST00000437034 CACNA1HO95180 2353 aa2.83□□□□□ -1.96
CAST-209ENST00000437034 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CAST-209ENST00000437034 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
CAST-209ENST00000437034 LAMA5O15230 3695 aa2.82□□□□□ -1.96
CAST-209ENST00000437034 KRTAP21-3Q3LHN1 58 aa2.81□□□□□ -1.96
CAST-209ENST00000437034 SPINK1P00995 79 aa2.81□□□□□ -1.96
CAST-209ENST00000437034 HIVEP2P31629 2446 aa2.8□□□□□ -1.96
CAST-209ENST00000437034 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
CAST-209ENST00000437034 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
CAST-209ENST00000437034 PKD1L2Q7Z442 2459 aa2.8□□□□□ -1.96
CAST-209ENST00000437034 SRRM2Q9UQ35 2752 aaKnown RBP2.79□□□□□ -1.96
CAST-209ENST00000437034 RELNP78509 3460 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 ALMS1Q8TCU4 4167 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 F8P00451 2351 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 TRRAPQ9Y4A5 3859 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 J3QKU1 62 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 IGKV2D-30A0A075B6S6 120 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 SPTBN4Q9H254 2564 aa2.79□□□□□ -1.96
CAST-209ENST00000437034 SPINK13Q1W4C9 94 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 KRTAP7-1Q8IUC3 87 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 SVEP1Q4LDE5 3571 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 CLPSL2Q6UWE3 100 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 UNQ6190/PRO20217Q6UXQ8 127 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 APLNQ9ULZ1 77 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 IGSF10Q6WRI0 2623 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 USMG5Q96IX5 58 aa2.78□□□□□ -1.96
CAST-209ENST00000437034 DEFB131AP59861 70 aa2.77□□□□□ -1.97
CAST-209ENST00000437034 RP1L1Q8IWN7 2480 aaPredicted RBP2.77□□□□□ -1.97
CAST-209ENST00000437034 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
CAST-209ENST00000437034 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
CAST-209ENST00000437034 PRRC2CQ9Y520 2896 aaKnown RBP2.77□□□□□ -1.97
CAST-209ENST00000437034 CUBNO60494 3623 aa2.76□□□□□ -1.97
CAST-209ENST00000437034 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
CAST-209ENST00000437034 FAM186AA6NE01 2351 aa2.76□□□□□ -1.97
CAST-209ENST00000437034 CELSR1Q9NYQ6 3014 aa2.76□□□□□ -1.97
CAST-209ENST00000437034 RIF1Q5UIP0 2472 aaKnown RBP2.76□□□□□ -1.97
CAST-209ENST00000437034 MUC6Q6W4X9 2439 aa2.76□□□□□ -1.97
CAST-209ENST00000437034 ANKRD11Q6UB99 2663 aaPredicted RBP2.76□□□□□ -1.97
CAST-209ENST00000437034 HUWE1Q7Z6Z7 4374 aaKnown RBP2.76□□□□□ -1.97
CAST-209ENST00000437034 LYSTQ99698 3801 aa2.75□□□□□ -1.97
CAST-209ENST00000437034 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
CAST-209ENST00000437034 TTC28Q96AY4 2481 aa2.75□□□□□ -1.97
CAST-209ENST00000437034 DMBT1Q9UGM3 2413 aaPredicted RBP2.75□□□□□ -1.97
CAST-209ENST00000437034 K7EIL1 84 aa2.74□□□□□ -1.97
CAST-209ENST00000437034 KRTAP10-9P60411 292 aa2.74□□□□□ -1.97
CAST-209ENST00000437034 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
CAST-209ENST00000437034 PKHD1P08F94 4074 aa2.74□□□□□ -1.97
CAST-209ENST00000437034 HECTD4Q9Y4D8 3996 aa2.73□□□□□ -1.97
CAST-209ENST00000437034 MAP1BP46821 2468 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms