RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 STAB1Q9NY15 2570 aa6.46□□□□□ -1.37
LDLRAD4-204ENST00000435606 SPRR1BP22528 89 aa6.46□□□□□ -1.38
LDLRAD4-204ENST00000435606 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
LDLRAD4-204ENST00000435606 Q5W150 140 aa6.44□□□□□ -1.38
LDLRAD4-204ENST00000435606 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
LDLRAD4-204ENST00000435606 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
LDLRAD4-204ENST00000435606 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
LDLRAD4-204ENST00000435606 Q75L30 129 aa6.41□□□□□ -1.38
LDLRAD4-204ENST00000435606 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
LDLRAD4-204ENST00000435606 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
LDLRAD4-204ENST00000435606 C5orf42Q9H799 3197 aa6.39□□□□□ -1.39
LDLRAD4-204ENST00000435606 TEX15Q9BXT5 2789 aa6.36□□□□□ -1.39
LDLRAD4-204ENST00000435606 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
LDLRAD4-204ENST00000435606 M0QZ58 72 aa6.36□□□□□ -1.39
LDLRAD4-204ENST00000435606 NBEAL1Q6ZS30 2694 aa6.32□□□□□ -1.4
LDLRAD4-204ENST00000435606 AKAP13Q12802 2813 aa6.32□□□□□ -1.4
LDLRAD4-204ENST00000435606 Q8NDZ9 215 aa6.32□□□□□ -1.4
LDLRAD4-204ENST00000435606 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
LDLRAD4-204ENST00000435606 Q6ZR54 194 aa6.31□□□□□ -1.4
LDLRAD4-204ENST00000435606 CEP350Q5VT06 3117 aa6.31□□□□□ -1.4
LDLRAD4-204ENST00000435606 CENPEQ02224 2701 aa6.3□□□□□ -1.4
LDLRAD4-204ENST00000435606 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
LDLRAD4-204ENST00000435606 BAHCC1Q9P281 2608 aa6.27□□□□□ -1.41
LDLRAD4-204ENST00000435606 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
LDLRAD4-204ENST00000435606 TEP1Q99973 2627 aaKnown RBP6.27□□□□□ -1.41
LDLRAD4-204ENST00000435606 SETXQ7Z333 2677 aaKnown RBP6.26□□□□□ -1.41
LDLRAD4-204ENST00000435606 XIRP2A4UGR9 3374 aa6.26□□□□□ -1.41
LDLRAD4-204ENST00000435606 CHD6Q8TD26 2715 aa6.26□□□□□ -1.41
LDLRAD4-204ENST00000435606 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
LDLRAD4-204ENST00000435606 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
LDLRAD4-204ENST00000435606 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
LDLRAD4-204ENST00000435606 ROMO1P60602 79 aa6.25□□□□□ -1.41
LDLRAD4-204ENST00000435606 UNC79Q9P2D8 2635 aa6.24□□□□□ -1.41
LDLRAD4-204ENST00000435606 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
LDLRAD4-204ENST00000435606 KMT2BQ9UMN6 2715 aaPredicted RBP6.22□□□□□ -1.41
LDLRAD4-204ENST00000435606 COL6A5A8TX70 2615 aa6.21□□□□□ -1.42
LDLRAD4-204ENST00000435606 MKI67P46013 3256 aaKnown RBP6.2□□□□□ -1.42
LDLRAD4-204ENST00000435606 A0A087X002 238 aa6.2□□□□□ -1.42
LDLRAD4-204ENST00000435606 PANO1I0J062 215 aa6.19□□□□□ -1.42
LDLRAD4-204ENST00000435606 BRCA2P51587 3418 aa6.18□□□□□ -1.42
LDLRAD4-204ENST00000435606 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
LDLRAD4-204ENST00000435606 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
LDLRAD4-204ENST00000435606 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
LDLRAD4-204ENST00000435606 Q5VV11 94 aa6.15□□□□□ -1.42
LDLRAD4-204ENST00000435606 ITPR2Q14571 2701 aa6.14□□□□□ -1.43
LDLRAD4-204ENST00000435606 CHD7Q9P2D1 2997 aa6.14□□□□□ -1.43
LDLRAD4-204ENST00000435606 ZNF292O60281 2723 aa6.11□□□□□ -1.43
LDLRAD4-204ENST00000435606 GCN1Q92616 2671 aaKnown RBP6.11□□□□□ -1.43
LDLRAD4-204ENST00000435606 A8MUU9 505 aa6.09□□□□□ -1.43
LDLRAD4-204ENST00000435606 Q6ZRN7 208 aaPredicted RBP6.09□□□□□ -1.43
LDLRAD4-204ENST00000435606 PRAC1Q96KF2 57 aa6.09□□□□□ -1.44
LDLRAD4-204ENST00000435606 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
LDLRAD4-204ENST00000435606 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
LDLRAD4-204ENST00000435606 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
LDLRAD4-204ENST00000435606 NOTCH1P46531 2555 aa6.05□□□□□ -1.44
LDLRAD4-204ENST00000435606 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
LDLRAD4-204ENST00000435606 Q5XG85 94 aa6.05□□□□□ -1.44
LDLRAD4-204ENST00000435606 CDH23Q9H251 3354 aa6.02□□□□□ -1.45
LDLRAD4-204ENST00000435606 STAB2Q8WWQ8 2551 aa6.02□□□□□ -1.45
LDLRAD4-204ENST00000435606 PRUNE2Q8WUY3 3088 aa6.02□□□□□ -1.45
LDLRAD4-204ENST00000435606 IGSF10Q6WRI0 2623 aa6.02□□□□□ -1.45
LDLRAD4-204ENST00000435606 NSD1Q96L73 2696 aaPredicted RBP6.01□□□□□ -1.45
LDLRAD4-204ENST00000435606 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
LDLRAD4-204ENST00000435606 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
LDLRAD4-204ENST00000435606 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
LDLRAD4-204ENST00000435606 TRANK1O15050 2925 aa5.99□□□□□ -1.45
LDLRAD4-204ENST00000435606 CHD9Q3L8U1 2897 aa5.99□□□□□ -1.45
LDLRAD4-204ENST00000435606 CFAP54Q96N23 3096 aa5.98□□□□□ -1.45
LDLRAD4-204ENST00000435606 DNAH14Q0VDD8 3507 aa5.98□□□□□ -1.45
LDLRAD4-204ENST00000435606 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
LDLRAD4-204ENST00000435606 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
LDLRAD4-204ENST00000435606 A0A0C4DFX4 3053 aa5.94□□□□□ -1.46
LDLRAD4-204ENST00000435606 SZT2Q5T011 3432 aa5.94□□□□□ -1.46
LDLRAD4-204ENST00000435606 TNP1P09430 55 aa5.93□□□□□ -1.46
LDLRAD4-204ENST00000435606 CELSR3Q9NYQ7 3312 aa5.93□□□□□ -1.46
LDLRAD4-204ENST00000435606 MAP1AP78559 2803 aaPredicted RBP5.93□□□□□ -1.46
LDLRAD4-204ENST00000435606 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
LDLRAD4-204ENST00000435606 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
LDLRAD4-204ENST00000435606 NBEAL2Q6ZNJ1 2754 aa5.92□□□□□ -1.46
LDLRAD4-204ENST00000435606 LAMA2P24043 3122 aaKnown RBP5.9□□□□□ -1.46
LDLRAD4-204ENST00000435606 RANBP2P49792 3224 aaKnown RBP5.9□□□□□ -1.46
LDLRAD4-204ENST00000435606 UBR5O95071 2799 aaPredicted RBP5.89□□□□□ -1.47
LDLRAD4-204ENST00000435606 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
LDLRAD4-204ENST00000435606 FRYQ5TBA9 3013 aa5.86□□□□□ -1.47
LDLRAD4-204ENST00000435606 H3BS24 57 aa5.85□□□□□ -1.47
LDLRAD4-204ENST00000435606 A8MU10 97 aa5.84□□□□□ -1.47
LDLRAD4-204ENST00000435606 HTTP42858 3142 aa5.83□□□□□ -1.48
LDLRAD4-204ENST00000435606 WDFY4Q6ZS81 3184 aa5.82□□□□□ -1.48
LDLRAD4-204ENST00000435606 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
LDLRAD4-204ENST00000435606 APCP25054 2843 aa5.8□□□□□ -1.48
LDLRAD4-204ENST00000435606 UNC80Q8N2C7 3258 aa5.79□□□□□ -1.48
LDLRAD4-204ENST00000435606 ITPR1Q14643 2758 aa5.79□□□□□ -1.48
LDLRAD4-204ENST00000435606 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
LDLRAD4-204ENST00000435606 USP34Q70CQ2 3546 aa5.77□□□□□ -1.49
LDLRAD4-204ENST00000435606 SPTBN5Q9NRC6 3674 aaKnown RBP5.77□□□□□ -1.49
LDLRAD4-204ENST00000435606 XP32Q5T750 250 aa5.76□□□□□ -1.49
LDLRAD4-204ENST00000435606 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
LDLRAD4-204ENST00000435606 UTP20O75691 2785 aaKnown RBP5.76□□□□□ -1.49
LDLRAD4-204ENST00000435606 TRIOO75962 3097 aa5.75□□□□□ -1.49
LDLRAD4-204ENST00000435606 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms