RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 DMXL1Q9Y485 3027 aa-0.13□□□□□ -2.43
PTPN4-205ENST00000433888 KALRNO60229 2985 aa-0.13□□□□□ -2.43
PTPN4-205ENST00000433888 TGP01266 2768 aa-0.13□□□□□ -2.43
PTPN4-205ENST00000433888 LCE6AA0A183 80 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 KRTAP6-2Q3LI66 62 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 ENHOQ6UWT2 76 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 HILPDAQ9Y5L2 63 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 MYO5CQ9NQX4 1742 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 ABCC1P33527 1531 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 PDE4DIPQ5VU43 2346 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 RRBP1Q9P2E9 1410 aaKnown RBP-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 NF1P21359 2839 aa-0.14□□□□□ -2.43
PTPN4-205ENST00000433888 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 PCNX1Q96RV3 2341 aa-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 DNAH6Q9C0G6 4158 aa-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 HERC2O95714 4834 aa-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 SETD2Q9BYW2 2564 aaPredicted RBP-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 CFAP74Q9C0B2 1584 aa-0.15□□□□□ -2.43
PTPN4-205ENST00000433888 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.43
PTPN4-205ENST00000433888 IQGAP3Q86VI3 1631 aa-0.16□□□□□ -2.43
PTPN4-205ENST00000433888 ZZEF1O43149 2961 aa-0.16□□□□□ -2.43
PTPN4-205ENST00000433888 DEFB130BP0DP73 79 aa-0.16□□□□□ -2.44
PTPN4-205ENST00000433888 DEFB130AP0DP74 79 aa-0.16□□□□□ -2.44
PTPN4-205ENST00000433888 ABCA8O94911 1581 aa-0.16□□□□□ -2.44
PTPN4-205ENST00000433888 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.44
PTPN4-205ENST00000433888 NBPF19A0A087WUL8 3843 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 MAP3K1Q13233 1512 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 FAT3Q8TDW7 4589 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 HTTP42858 3142 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 MUC17Q685J3 4493 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 CRIP1P50238 77 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 ANKARQ7Z5J8 1434 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 NRAPQ86VF7 1730 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 SPTBN4Q9H254 2564 aa-0.17□□□□□ -2.44
PTPN4-205ENST00000433888 AKAP9Q99996 3911 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 NBASA2RRP1 2371 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 DNAH2Q9P225 4427 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 DNAH9Q9NYC9 4486 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 HECTD1Q9ULT8 2610 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 IAPPP10997 89 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 NEBP20929 6669 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 LMTK2Q8IWU2 1503 aa-0.18□□□□□ -2.44
PTPN4-205ENST00000433888 USH2AO75445 5202 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 RYR3Q15413 4870 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 DIP2AQ14689 1571 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 H3BNG1 76 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 CD163L1Q9NR16 1453 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 ITSN1Q15811 1721 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 DNAH3Q8TD57 4116 aa-0.19□□□□□ -2.44
PTPN4-205ENST00000433888 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 APOBP04114 4563 aaKnown RBP-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 WIZO95785 1651 aa-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 CUBNO60494 3623 aa-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 UGGT2Q9NYU1 1516 aa-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 EPPK1P58107 5090 aaKnown RBP-0.2□□□□□ -2.44
PTPN4-205ENST00000433888 HIVEP1P15822 2718 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 PARP4Q9UKK3 1724 aaKnown RBP-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 LAMA5O15230 3695 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 UBL5Q9BZL1 73 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 SMCO4Q9NRQ5 59 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 GNG13Q9P2W3 67 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 PCLOQ9Y6V0 5065 aa-0.21□□□□□ -2.44
PTPN4-205ENST00000433888 ANK3Q12955 4377 aaKnown RBP-0.22□□□□□ -2.44
PTPN4-205ENST00000433888 DNAH11Q96DT5 4516 aa-0.22□□□□□ -2.44
PTPN4-205ENST00000433888 BIRC6Q9NR09 4857 aa-0.22□□□□□ -2.44
PTPN4-205ENST00000433888 DEFB131BA0A096LNP1 70 aa-0.22□□□□□ -2.44
PTPN4-205ENST00000433888 RYR1P21817 5038 aa-0.22□□□□□ -2.45
PTPN4-205ENST00000433888 CCDC88BA6NC98 1476 aa-0.22□□□□□ -2.45
PTPN4-205ENST00000433888 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 PKHD1L1Q86WI1 4243 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 ANKRD36CQ5JPF3 1778 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 LYNX1G3V0Z9 82 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 ATXN8Q156A1 80 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 ANKRD50Q9ULJ7 1429 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 CDC42BPGQ6DT37 1551 aa-0.23□□□□□ -2.45
PTPN4-205ENST00000433888 DEPDC5O75140 1603 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 GCN1Q92616 2671 aaKnown RBP-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 TACC2O95359 2948 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 PDCD5O14737 125 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 SPRR2AP35326 72 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 DEFB106AQ8N104 65 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 KCNQ1DNQ9H478 68 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 HFM1A2PYH4 1435 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 RALGAPBQ86X10 1494 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 MXRA5Q9NR99 2828 aa-0.24□□□□□ -2.45
PTPN4-205ENST00000433888 STAB2Q8WWQ8 2551 aa-0.25□□□□□ -2.45
PTPN4-205ENST00000433888 ETDCA0A1B0GVM5 59 aa-0.25□□□□□ -2.45
PTPN4-205ENST00000433888 SCRIBQ14160 1630 aa-0.26□□□□□ -2.45
PTPN4-205ENST00000433888 ABCA9Q8IUA7 1624 aa-0.26□□□□□ -2.45
PTPN4-205ENST00000433888 MRPL33O75394 65 aaKnown RBP-0.26□□□□□ -2.45
PTPN4-205ENST00000433888 PRLHP81277 87 aa-0.26□□□□□ -2.45
PTPN4-205ENST00000433888 BPTFQ12830 3046 aa-0.26□□□□□ -2.45
PTPN4-205ENST00000433888 SACSQ9NZJ4 4579 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms