RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
TTC28-202ENST00000431039 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
TTC28-202ENST00000431039 H3BQ85 93 aa9.88□□□□□ -0.83
TTC28-202ENST00000431039 GHRHP01286 108 aa9.88□□□□□ -0.83
TTC28-202ENST00000431039 SPRR4Q96PI1 79 aa9.88□□□□□ -0.83
TTC28-202ENST00000431039 H3BMG7 143 aa9.87□□□□□ -0.83
TTC28-202ENST00000431039 SPRR1BP22528 89 aa9.87□□□□□ -0.83
TTC28-202ENST00000431039 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
TTC28-202ENST00000431039 TEX49A0A1B0GTD5 131 aa9.86□□□□□ -0.83
TTC28-202ENST00000431039 A0A1B0GV90 55 aa9.86□□□□□ -0.83
TTC28-202ENST00000431039 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
TTC28-202ENST00000431039 ORMDL1Q9P0S3 153 aa9.86□□□□□ -0.83
TTC28-202ENST00000431039 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
TTC28-202ENST00000431039 GAGE2AQ6NT46 116 aa9.85□□□□□ -0.83
TTC28-202ENST00000431039 Q8N377 158 aa9.85□□□□□ -0.83
TTC28-202ENST00000431039 DEFB105AQ8NG35 78 aa9.85□□□□□ -0.83
TTC28-202ENST00000431039 C9JAW5 83 aa9.84□□□□□ -0.83
TTC28-202ENST00000431039 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
TTC28-202ENST00000431039 BAALC-AS2P0C853 105 aa9.83□□□□□ -0.84
TTC28-202ENST00000431039 KRTAP1-4P0C5Y4 121 aa9.81□□□□□ -0.84
TTC28-202ENST00000431039 PRR26Q8N8Z3 221 aa9.81□□□□□ -0.84
TTC28-202ENST00000431039 H3BT86 120 aa9.79□□□□□ -0.84
TTC28-202ENST00000431039 UBE2V1Q13404 147 aa9.79□□□□□ -0.84
TTC28-202ENST00000431039 FAM229BQ4G0N7 80 aa9.79□□□□□ -0.84
TTC28-202ENST00000431039 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
TTC28-202ENST00000431039 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
TTC28-202ENST00000431039 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
TTC28-202ENST00000431039 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
TTC28-202ENST00000431039 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
TTC28-202ENST00000431039 ANKRD29Q8N6D5 301 aa9.76□□□□□ -0.85
TTC28-202ENST00000431039 F8W1H4 67 aa9.75□□□□□ -0.85
TTC28-202ENST00000431039 NDUFV3P56181 108 aaKnown RBP9.75□□□□□ -0.85
TTC28-202ENST00000431039 CRYGAP11844 174 aa9.74□□□□□ -0.85
TTC28-202ENST00000431039 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
TTC28-202ENST00000431039 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
TTC28-202ENST00000431039 A0A087X002 238 aa9.71□□□□□ -0.86
TTC28-202ENST00000431039 F8WEM9 126 aa9.71□□□□□ -0.86
TTC28-202ENST00000431039 MUC2Q02817 5179 aa9.7□□□□□ -0.86
TTC28-202ENST00000431039 IGLV8-61A0A075B6I0 122 aa9.7□□□□□ -0.86
TTC28-202ENST00000431039 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
TTC28-202ENST00000431039 KRTAP13-2Q52LG2 175 aa9.69□□□□□ -0.86
TTC28-202ENST00000431039 JMJD7-PLA2G4BH0Y9G9 81 aa9.68□□□□□ -0.86
TTC28-202ENST00000431039 OBSCN-AS1Q96MR7 158 aa9.68□□□□□ -0.86
TTC28-202ENST00000431039 PRR4Q16378 134 aa9.67□□□□□ -0.86
TTC28-202ENST00000431039 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
TTC28-202ENST00000431039 Q8NBF4 154 aa9.67□□□□□ -0.86
TTC28-202ENST00000431039 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
TTC28-202ENST00000431039 MOBPQ13875 183 aa9.66□□□□□ -0.86
TTC28-202ENST00000431039 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
TTC28-202ENST00000431039 Q6JHZ5 121 aa9.65□□□□□ -0.86
TTC28-202ENST00000431039 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
TTC28-202ENST00000431039 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
TTC28-202ENST00000431039 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
TTC28-202ENST00000431039 A0A1B0GV72 72 aa9.61□□□□□ -0.87
TTC28-202ENST00000431039 ETDBQ3ZM63 59 aa9.61□□□□□ -0.87
TTC28-202ENST00000431039 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
TTC28-202ENST00000431039 IGFL1Q6UW32 110 aa9.6□□□□□ -0.87
TTC28-202ENST00000431039 LOC110117498A0A087WWA1 95 aa9.59□□□□□ -0.87
TTC28-202ENST00000431039 PDE6GP18545 87 aa9.59□□□□□ -0.87
TTC28-202ENST00000431039 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
TTC28-202ENST00000431039 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
TTC28-202ENST00000431039 C21orf62-AS1Q17RA5 79 aa9.56□□□□□ -0.88
TTC28-202ENST00000431039 CD164Q04900 197 aa9.55□□□□□ -0.88
TTC28-202ENST00000431039 Q6Q795 121 aa9.55□□□□□ -0.88
TTC28-202ENST00000431039 Q6ZQT0 140 aa9.55□□□□□ -0.88
TTC28-202ENST00000431039 A0A1W2PNM2 257 aa9.53□□□□□ -0.88
TTC28-202ENST00000431039 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
TTC28-202ENST00000431039 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
TTC28-202ENST00000431039 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
TTC28-202ENST00000431039 A0A0U1RQV1 116 aa9.52□□□□□ -0.89
TTC28-202ENST00000431039 CCKP06307 115 aa9.52□□□□□ -0.89
TTC28-202ENST00000431039 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
TTC28-202ENST00000431039 SPINK1P00995 79 aa9.49□□□□□ -0.89
TTC28-202ENST00000431039 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 A0A1B0GW54 56 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 VPS25Q9BRG1 176 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 KRTAP9-2Q9BYQ4 174 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
TTC28-202ENST00000431039 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
TTC28-202ENST00000431039 Q5XG85 94 aa9.44□□□□□ -0.9
TTC28-202ENST00000431039 RETNLBQ9BQ08 111 aa9.43□□□□□ -0.9
TTC28-202ENST00000431039 A0A087WSZ3 146 aa9.42□□□□□ -0.9
TTC28-202ENST00000431039 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
TTC28-202ENST00000431039 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
TTC28-202ENST00000431039 J3QR89 54 aa9.38□□□□□ -0.91
TTC28-202ENST00000431039 ASB16-AS1Q495Z4 193 aa9.38□□□□□ -0.91
TTC28-202ENST00000431039 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
TTC28-202ENST00000431039 FAM240AA0A1B0GVK7 77 aa9.37□□□□□ -0.91
TTC28-202ENST00000431039 ACYP1P07311 99 aa9.37□□□□□ -0.91
TTC28-202ENST00000431039 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
TTC28-202ENST00000431039 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
TTC28-202ENST00000431039 NREPQ16612 68 aa9.32□□□□□ -0.92
TTC28-202ENST00000431039 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
TTC28-202ENST00000431039 K7ERU9 68 aa9.3□□□□□ -0.92
TTC28-202ENST00000431039 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
TTC28-202ENST00000431039 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
TTC28-202ENST00000431039 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
TTC28-202ENST00000431039 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
TTC28-202ENST00000431039 Q6ZVQ6 151 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms