RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 JMJD1CQ15652 2540 aa3.99□□□□□ -1.77
CPS1-203ENST00000430249 CEP295Q9C0D2 2601 aa3.98□□□□□ -1.77
CPS1-203ENST00000430249 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
CPS1-203ENST00000430249 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.78
CPS1-203ENST00000430249 A6NN06 94 aa3.96□□□□□ -1.78
CPS1-203ENST00000430249 A8MUU9 505 aa3.95□□□□□ -1.78
CPS1-203ENST00000430249 F8P00451 2351 aa3.95□□□□□ -1.78
CPS1-203ENST00000430249 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
CPS1-203ENST00000430249 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
CPS1-203ENST00000430249 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
CPS1-203ENST00000430249 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
CPS1-203ENST00000430249 CHD8Q9HCK8 2581 aa3.93□□□□□ -1.78
CPS1-203ENST00000430249 ZFYVE26Q68DK2 2539 aa3.92□□□□□ -1.78
CPS1-203ENST00000430249 FASNP49327 2511 aaKnown RBP3.92□□□□□ -1.78
CPS1-203ENST00000430249 H3BS24 57 aa3.91□□□□□ -1.78
CPS1-203ENST00000430249 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
CPS1-203ENST00000430249 BPTFQ12830 3046 aa3.88□□□□□ -1.79
CPS1-203ENST00000430249 MTORP42345 2549 aa3.87□□□□□ -1.79
CPS1-203ENST00000430249 POLQO75417 2590 aa3.86□□□□□ -1.79
CPS1-203ENST00000430249 TNP1P09430 55 aa3.86□□□□□ -1.79
CPS1-203ENST00000430249 ACANP16112 2415 aa3.84□□□□□ -1.79
CPS1-203ENST00000430249 SPTBN4Q9H254 2564 aa3.84□□□□□ -1.8
CPS1-203ENST00000430249 KRTAP16-1A8MUX0 517 aa3.82□□□□□ -1.8
CPS1-203ENST00000430249 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
CPS1-203ENST00000430249 A8MU10 97 aa3.8□□□□□ -1.8
CPS1-203ENST00000430249 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
CPS1-203ENST00000430249 FLNAP21333 2647 aaKnown RBP3.78□□□□□ -1.8
CPS1-203ENST00000430249 XP32Q5T750 250 aa3.77□□□□□ -1.81
CPS1-203ENST00000430249 WDR87Q6ZQQ6 2873 aa3.77□□□□□ -1.81
CPS1-203ENST00000430249 SETD2Q9BYW2 2564 aaPredicted RBP3.76□□□□□ -1.81
CPS1-203ENST00000430249 SRCAPQ6ZRS2 3230 aa3.75□□□□□ -1.81
CPS1-203ENST00000430249 ITPR3Q14573 2671 aa3.73□□□□□ -1.81
CPS1-203ENST00000430249 HECTD1Q9ULT8 2610 aa3.7□□□□□ -1.82
CPS1-203ENST00000430249 KMT2BQ9UMN6 2715 aaPredicted RBP3.7□□□□□ -1.82
CPS1-203ENST00000430249 EPG5Q9HCE0 2579 aa3.69□□□□□ -1.82
CPS1-203ENST00000430249 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
CPS1-203ENST00000430249 KRTAP13-3Q3SY46 172 aa3.68□□□□□ -1.82
CPS1-203ENST00000430249 HELZ2Q9BYK8 2649 aaKnown RBP3.66□□□□□ -1.82
CPS1-203ENST00000430249 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CPS1-203ENST00000430249 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
CPS1-203ENST00000430249 H0YAA0 97 aa3.64□□□□□ -1.83
CPS1-203ENST00000430249 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
CPS1-203ENST00000430249 P0C880 135 aa3.62□□□□□ -1.83
CPS1-203ENST00000430249 ATRQ13535 2644 aa3.62□□□□□ -1.83
CPS1-203ENST00000430249 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
CPS1-203ENST00000430249 CHD9Q3L8U1 2897 aa3.59□□□□□ -1.83
CPS1-203ENST00000430249 CENPFP49454 3210 aa3.59□□□□□ -1.83
CPS1-203ENST00000430249 USP24Q9UPU5 2620 aa3.58□□□□□ -1.84
CPS1-203ENST00000430249 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
CPS1-203ENST00000430249 MAST4O15021 2626 aa3.55□□□□□ -1.84
CPS1-203ENST00000430249 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
CPS1-203ENST00000430249 TRANK1O15050 2925 aa3.55□□□□□ -1.84
CPS1-203ENST00000430249 ZNF292O60281 2723 aa3.53□□□□□ -1.84
CPS1-203ENST00000430249 CHD7Q9P2D1 2997 aa3.52□□□□□ -1.85
CPS1-203ENST00000430249 CFAP46Q8IYW2 2715 aa3.51□□□□□ -1.85
CPS1-203ENST00000430249 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
CPS1-203ENST00000430249 A0A0C4DFX4 3053 aa3.5□□□□□ -1.85
CPS1-203ENST00000430249 TEP1Q99973 2627 aaKnown RBP3.5□□□□□ -1.85
CPS1-203ENST00000430249 DNAH12Q6ZR08 3092 aa3.5□□□□□ -1.85
CPS1-203ENST00000430249 KRTAP13-4Q3LI77 160 aa3.5□□□□□ -1.85
CPS1-203ENST00000430249 FLNBO75369 2602 aaKnown RBP3.48□□□□□ -1.85
CPS1-203ENST00000430249 GOLGB1Q14789 3259 aaKnown RBP3.46□□□□□ -1.86
CPS1-203ENST00000430249 IGSF10Q6WRI0 2623 aa3.45□□□□□ -1.86
CPS1-203ENST00000430249 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
CPS1-203ENST00000430249 DMBT1Q9UGM3 2413 aaPredicted RBP3.44□□□□□ -1.86
CPS1-203ENST00000430249 CENPEQ02224 2701 aa3.44□□□□□ -1.86
CPS1-203ENST00000430249 NBEAL1Q6ZS30 2694 aa3.43□□□□□ -1.86
CPS1-203ENST00000430249 AKAP13Q12802 2813 aa3.42□□□□□ -1.86
CPS1-203ENST00000430249 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
CPS1-203ENST00000430249 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
CPS1-203ENST00000430249 CHD6Q8TD26 2715 aa3.41□□□□□ -1.86
CPS1-203ENST00000430249 GCN1Q92616 2671 aaKnown RBP3.4□□□□□ -1.86
CPS1-203ENST00000430249 ITPR2Q14571 2701 aa3.39□□□□□ -1.87
CPS1-203ENST00000430249 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
CPS1-203ENST00000430249 STAB1Q9NY15 2570 aa3.38□□□□□ -1.87
CPS1-203ENST00000430249 HTTP42858 3142 aa3.36□□□□□ -1.87
CPS1-203ENST00000430249 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
CPS1-203ENST00000430249 TEX15Q9BXT5 2789 aa3.35□□□□□ -1.87
CPS1-203ENST00000430249 BAHCC1Q9P281 2608 aa3.34□□□□□ -1.87
CPS1-203ENST00000430249 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.87
CPS1-203ENST00000430249 PRRC2CQ9Y520 2896 aaKnown RBP3.34□□□□□ -1.87
CPS1-203ENST00000430249 CEP350Q5VT06 3117 aa3.34□□□□□ -1.88
CPS1-203ENST00000430249 UTRNP46939 3433 aa3.33□□□□□ -1.88
CPS1-203ENST00000430249 MAP1AP78559 2803 aaPredicted RBP3.33□□□□□ -1.88
CPS1-203ENST00000430249 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
CPS1-203ENST00000430249 C5orf42Q9H799 3197 aa3.29□□□□□ -1.88
CPS1-203ENST00000430249 UBR5O95071 2799 aaPredicted RBP3.29□□□□□ -1.88
CPS1-203ENST00000430249 PCNTO95613 3336 aa3.28□□□□□ -1.88
CPS1-203ENST00000430249 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CPS1-203ENST00000430249 MGAQ8IWI9 3026 aa3.27□□□□□ -1.89
CPS1-203ENST00000430249 STAB2Q8WWQ8 2551 aa3.27□□□□□ -1.89
CPS1-203ENST00000430249 INE1O15225 51 aa3.26□□□□□ -1.89
CPS1-203ENST00000430249 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
CPS1-203ENST00000430249 LAMA1P25391 3075 aa3.25□□□□□ -1.89
CPS1-203ENST00000430249 NBEAL2Q6ZNJ1 2754 aa3.25□□□□□ -1.89
CPS1-203ENST00000430249 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
CPS1-203ENST00000430249 HIVEP1P15822 2718 aa3.24□□□□□ -1.89
CPS1-203ENST00000430249 FLG2Q5D862 2391 aaPredicted RBP3.23□□□□□ -1.89
CPS1-203ENST00000430249 ALMS1Q8TCU4 4167 aa3.23□□□□□ -1.89
CPS1-203ENST00000430249 CFAP54Q96N23 3096 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms