RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 UQCR10Q9UDW1 63 aa9.75□□□□□ -0.85
CTSD-203ENST00000429746 PRO1854Q9UHT4 67 aa9.75□□□□□ -0.85
CTSD-203ENST00000429746 SLC25A20O43772 301 aa9.74□□□□□ -0.85
CTSD-203ENST00000429746 CD164Q04900 197 aa9.73□□□□□ -0.85
CTSD-203ENST00000429746 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
CTSD-203ENST00000429746 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
CTSD-203ENST00000429746 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
CTSD-203ENST00000429746 TMEM238LA0A1B0GVL6 79 aa9.72□□□□□ -0.85
CTSD-203ENST00000429746 A6NJY4 79 aa9.72□□□□□ -0.85
CTSD-203ENST00000429746 K7ERJ3 54 aa9.72□□□□□ -0.85
CTSD-203ENST00000429746 HRCT1Q6UXD1 115 aa9.71□□□□□ -0.86
CTSD-203ENST00000429746 CDIP1Q9H305 208 aa9.71□□□□□ -0.86
CTSD-203ENST00000429746 TRIAP1O43715 76 aa9.7□□□□□ -0.86
CTSD-203ENST00000429746 H0YGX0 51 aa9.69□□□□□ -0.86
CTSD-203ENST00000429746 Q5XG85 94 aa9.69□□□□□ -0.86
CTSD-203ENST00000429746 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
CTSD-203ENST00000429746 LOC105371267A0A1B0GV96 52 aa9.65□□□□□ -0.86
CTSD-203ENST00000429746 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
CTSD-203ENST00000429746 IGFL1Q6UW32 110 aa9.64□□□□□ -0.87
CTSD-203ENST00000429746 LIMD2Q9BT23 127 aa9.64□□□□□ -0.87
CTSD-203ENST00000429746 OCIAD2Q56VL3 154 aa9.63□□□□□ -0.87
CTSD-203ENST00000429746 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
CTSD-203ENST00000429746 A0A1B0GX51 115 aa9.62□□□□□ -0.87
CTSD-203ENST00000429746 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
CTSD-203ENST00000429746 F8WEM9 126 aa9.59□□□□□ -0.87
CTSD-203ENST00000429746 H3BUT2 72 aa9.59□□□□□ -0.87
CTSD-203ENST00000429746 Q6JHZ5 121 aa9.59□□□□□ -0.87
CTSD-203ENST00000429746 FAT4Q6V0I7 4981 aa9.57□□□□□ -0.88
CTSD-203ENST00000429746 XP32Q5T750 250 aa9.56□□□□□ -0.88
CTSD-203ENST00000429746 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
CTSD-203ENST00000429746 TRBV7-7A0A0K0K1E9 115 aa9.55□□□□□ -0.88
CTSD-203ENST00000429746 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
CTSD-203ENST00000429746 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
CTSD-203ENST00000429746 PSMB2P49721 201 aa9.52□□□□□ -0.89
CTSD-203ENST00000429746 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
CTSD-203ENST00000429746 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
CTSD-203ENST00000429746 Q6Q795 121 aa9.51□□□□□ -0.89
CTSD-203ENST00000429746 SNCGO76070 127 aa9.5□□□□□ -0.89
CTSD-203ENST00000429746 LST1O00453 97 aa9.49□□□□□ -0.89
CTSD-203ENST00000429746 H3BMG7 143 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 TCL1BO95988 128 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 TRACP01848 142 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 COX6CP09669 75 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 FABP2P12104 132 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 SEC61BP60468 96 aaKnown RBP9.47□□□□□ -0.89
CTSD-203ENST00000429746 ORMDL1Q9P0S3 153 aa9.47□□□□□ -0.89
CTSD-203ENST00000429746 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
CTSD-203ENST00000429746 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
CTSD-203ENST00000429746 M0R143 59 aa9.46□□□□□ -0.9
CTSD-203ENST00000429746 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
CTSD-203ENST00000429746 NAA38Q9BRA0 125 aaKnown RBP9.44□□□□□ -0.9
CTSD-203ENST00000429746 DNAL4O96015 105 aa9.43□□□□□ -0.9
CTSD-203ENST00000429746 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
CTSD-203ENST00000429746 GHRHP01286 108 aa9.42□□□□□ -0.9
CTSD-203ENST00000429746 Q96NJ1 140 aa9.41□□□□□ -0.9
CTSD-203ENST00000429746 H3BQ85 93 aa9.4□□□□□ -0.9
CTSD-203ENST00000429746 TMEM256-PLSCR3K7ERE1 68 aa9.4□□□□□ -0.9
CTSD-203ENST00000429746 UBE2V1Q13404 147 aa9.4□□□□□ -0.9
CTSD-203ENST00000429746 SCGB1C2P0DMR2 95 aa9.39□□□□□ -0.91
CTSD-203ENST00000429746 A0A087WSZ3 146 aa9.38□□□□□ -0.91
CTSD-203ENST00000429746 A0A1B0GV72 72 aa9.38□□□□□ -0.91
CTSD-203ENST00000429746 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
CTSD-203ENST00000429746 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
CTSD-203ENST00000429746 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
CTSD-203ENST00000429746 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
CTSD-203ENST00000429746 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
CTSD-203ENST00000429746 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
CTSD-203ENST00000429746 RPL37P61927 97 aaKnown RBP9.32□□□□□ -0.92
CTSD-203ENST00000429746 TAX1BP3O14907 124 aa9.31□□□□□ -0.92
CTSD-203ENST00000429746 BATFQ16520 125 aa9.31□□□□□ -0.92
CTSD-203ENST00000429746 ATXN8Q156A1 80 aa9.3□□□□□ -0.92
CTSD-203ENST00000429746 KRTAP19-2Q3LHN2 52 aa9.3□□□□□ -0.92
CTSD-203ENST00000429746 CCKP06307 115 aa9.28□□□□□ -0.92
CTSD-203ENST00000429746 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
CTSD-203ENST00000429746 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
CTSD-203ENST00000429746 RBM3P98179 157 aaKnown RBP9.26□□□□□ -0.93
CTSD-203ENST00000429746 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
CTSD-203ENST00000429746 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
CTSD-203ENST00000429746 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
CTSD-203ENST00000429746 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
CTSD-203ENST00000429746 Q75L30 129 aa9.21□□□□□ -0.94
CTSD-203ENST00000429746 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
CTSD-203ENST00000429746 Q6ZQT0 140 aa9.2□□□□□ -0.94
CTSD-203ENST00000429746 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
CTSD-203ENST00000429746 C9JAW5 83 aa9.19□□□□□ -0.94
CTSD-203ENST00000429746 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
CTSD-203ENST00000429746 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
CTSD-203ENST00000429746 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
CTSD-203ENST00000429746 DEFB116Q30KQ4 102 aa9.18□□□□□ -0.94
CTSD-203ENST00000429746 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
CTSD-203ENST00000429746 A8MUU9 505 aa9.17□□□□□ -0.94
CTSD-203ENST00000429746 DSCR10P59022 87 aa9.17□□□□□ -0.94
CTSD-203ENST00000429746 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
CTSD-203ENST00000429746 IGKV4-1P06312 121 aa9.16□□□□□ -0.94
CTSD-203ENST00000429746 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
CTSD-203ENST00000429746 SIGMAR1Q99720 223 aa9.15□□□□□ -0.94
CTSD-203ENST00000429746 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
CTSD-203ENST00000429746 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
CTSD-203ENST00000429746 FLGP20930 4061 aaPredicted RBP9.12□□□□□ -0.95
CTSD-203ENST00000429746 H3BT86 120 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms