RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 Q6ZR54 194 aa9.48□□□□□ -0.89
C4A-243ENST00000428956 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
C4A-243ENST00000428956 SPINK7P58062 85 aa9.46□□□□□ -0.89
C4A-243ENST00000428956 CSAG1Q6PB30 78 aa9.45□□□□□ -0.9
C4A-243ENST00000428956 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
C4A-243ENST00000428956 CEP350Q5VT06 3117 aa9.44□□□□□ -0.9
C4A-243ENST00000428956 S4R3F8 94 aa9.43□□□□□ -0.9
C4A-243ENST00000428956 CHD9Q3L8U1 2897 aa9.43□□□□□ -0.9
C4A-243ENST00000428956 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.9
C4A-243ENST00000428956 MAST4O15021 2626 aa9.4□□□□□ -0.91
C4A-243ENST00000428956 CAMK2N1Q7Z7J9 78 aa9.39□□□□□ -0.91
C4A-243ENST00000428956 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
C4A-243ENST00000428956 CFAP46Q8IYW2 2715 aa9.33□□□□□ -0.92
C4A-243ENST00000428956 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
C4A-243ENST00000428956 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.93
C4A-243ENST00000428956 Q5VSD8 79 aa9.27□□□□□ -0.93
C4A-243ENST00000428956 KRTAP10-1P60331 282 aa9.26□□□□□ -0.93
C4A-243ENST00000428956 TRANK1O15050 2925 aa9.26□□□□□ -0.93
C4A-243ENST00000428956 ROMO1P60602 79 aa9.25□□□□□ -0.93
C4A-243ENST00000428956 C5orf42Q9H799 3197 aa9.25□□□□□ -0.93
C4A-243ENST00000428956 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
C4A-243ENST00000428956 R4GN34 69 aa9.22□□□□□ -0.93
C4A-243ENST00000428956 PANO1I0J062 215 aa9.21□□□□□ -0.93
C4A-243ENST00000428956 ZNF292O60281 2723 aa9.21□□□□□ -0.93
C4A-243ENST00000428956 CENPEQ02224 2701 aa9.21□□□□□ -0.94
C4A-243ENST00000428956 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
C4A-243ENST00000428956 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.94
C4A-243ENST00000428956 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
C4A-243ENST00000428956 M0R2T5 61 aa9.19□□□□□ -0.94
C4A-243ENST00000428956 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
C4A-243ENST00000428956 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
C4A-243ENST00000428956 AKAP13Q12802 2813 aa9.16□□□□□ -0.94
C4A-243ENST00000428956 HTTP42858 3142 aa9.16□□□□□ -0.94
C4A-243ENST00000428956 STAB1Q9NY15 2570 aa9.13□□□□□ -0.95
C4A-243ENST00000428956 GCN1Q92616 2671 aaKnown RBP9.13□□□□□ -0.95
C4A-243ENST00000428956 H3BS24 57 aa9.12□□□□□ -0.95
C4A-243ENST00000428956 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
C4A-243ENST00000428956 NBEAL1Q6ZS30 2694 aa9.11□□□□□ -0.95
C4A-243ENST00000428956 A0A0A0MQY5 61 aa9.11□□□□□ -0.95
C4A-243ENST00000428956 A0A087X002 238 aa9.11□□□□□ -0.95
C4A-243ENST00000428956 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
C4A-243ENST00000428956 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
C4A-243ENST00000428956 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
C4A-243ENST00000428956 MGAQ8IWI9 3026 aa9.08□□□□□ -0.96
C4A-243ENST00000428956 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
C4A-243ENST00000428956 KRTAP11-1Q8IUC1 163 aa9.06□□□□□ -0.96
C4A-243ENST00000428956 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
C4A-243ENST00000428956 UTRNP46939 3433 aa9.05□□□□□ -0.96
C4A-243ENST00000428956 A6NN06 94 aa9.04□□□□□ -0.96
C4A-243ENST00000428956 M0QZ58 72 aa9.04□□□□□ -0.96
C4A-243ENST00000428956 CFAP54Q96N23 3096 aa9.01□□□□□ -0.97
C4A-243ENST00000428956 A0A0C4DFX4 3053 aa9□□□□□ -0.97
C4A-243ENST00000428956 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
C4A-243ENST00000428956 TEP1Q99973 2627 aaKnown RBP8.97□□□□□ -0.97
C4A-243ENST00000428956 PCNTO95613 3336 aa8.97□□□□□ -0.97
C4A-243ENST00000428956 COL6A5A8TX70 2615 aa8.96□□□□□ -0.98
C4A-243ENST00000428956 SETXQ7Z333 2677 aaKnown RBP8.93□□□□□ -0.98
C4A-243ENST00000428956 RANBP2P49792 3224 aaKnown RBP8.92□□□□□ -0.98
C4A-243ENST00000428956 NOTCH1P46531 2555 aa8.91□□□□□ -0.98
C4A-243ENST00000428956 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.98
C4A-243ENST00000428956 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.99
C4A-243ENST00000428956 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
C4A-243ENST00000428956 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
C4A-243ENST00000428956 IGSF10Q6WRI0 2623 aa8.89□□□□□ -0.99
C4A-243ENST00000428956 FLG2Q5D862 2391 aaPredicted RBP8.83□□□□□ -1
C4A-243ENST00000428956 NSD1Q96L73 2696 aaPredicted RBP8.81□□□□□ -1
C4A-243ENST00000428956 PLAC4Q8WY50 150 aa8.81□□□□□ -1
C4A-243ENST00000428956 UBR5O95071 2799 aaPredicted RBP8.78□□□□□ -1
C4A-243ENST00000428956 A8MU10 97 aa8.77□□□□□ -1.01
C4A-243ENST00000428956 DSPP15924 2871 aaKnown RBP8.76□□□□□ -1.01
C4A-243ENST00000428956 WDFY4Q6ZS81 3184 aa8.75□□□□□ -1.01
C4A-243ENST00000428956 MKI67P46013 3256 aaKnown RBP8.75□□□□□ -1.01
C4A-243ENST00000428956 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
C4A-243ENST00000428956 A8MUU9 505 aa8.73□□□□□ -1.01
C4A-243ENST00000428956 FRYQ5TBA9 3013 aa8.71□□□□□ -1.01
C4A-243ENST00000428956 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
C4A-243ENST00000428956 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.02
C4A-243ENST00000428956 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
C4A-243ENST00000428956 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
C4A-243ENST00000428956 LAMA3Q16787 3333 aa8.69□□□□□ -1.02
C4A-243ENST00000428956 MAP1AP78559 2803 aaPredicted RBP8.69□□□□□ -1.02
C4A-243ENST00000428956 TRIOO75962 3097 aa8.66□□□□□ -1.02
C4A-243ENST00000428956 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.03
C4A-243ENST00000428956 ITPR1Q14643 2758 aa8.64□□□□□ -1.03
C4A-243ENST00000428956 VPS13AQ96RL7 3174 aa8.57□□□□□ -1.04
C4A-243ENST00000428956 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
C4A-243ENST00000428956 KALRNO60229 2985 aa8.51□□□□□ -1.05
C4A-243ENST00000428956 FLNCQ14315 2725 aa8.5□□□□□ -1.05
C4A-243ENST00000428956 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
C4A-243ENST00000428956 APCP25054 2843 aa8.47□□□□□ -1.05
C4A-243ENST00000428956 TNP1P09430 55 aa8.47□□□□□ -1.05
C4A-243ENST00000428956 NDUFAF8A1L188 74 aa8.46□□□□□ -1.06
C4A-243ENST00000428956 BRCA2P51587 3418 aa8.45□□□□□ -1.06
C4A-243ENST00000428956 UTP20O75691 2785 aaKnown RBP8.43□□□□□ -1.06
C4A-243ENST00000428956 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
C4A-243ENST00000428956 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
C4A-243ENST00000428956 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
C4A-243ENST00000428956 ATMQ13315 3056 aa8.39□□□□□ -1.07
C4A-243ENST00000428956 HIVEP1P15822 2718 aa8.37□□□□□ -1.07
C4A-243ENST00000428956 XP32Q5T750 250 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms