RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
ATP2C1-204ENST00000428331 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
ATP2C1-204ENST00000428331 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
ATP2C1-204ENST00000428331 A8MUN3 132 aa6.86□□□□□ -1.31
ATP2C1-204ENST00000428331 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
ATP2C1-204ENST00000428331 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
ATP2C1-204ENST00000428331 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
ATP2C1-204ENST00000428331 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
ATP2C1-204ENST00000428331 C16orf90A8MZG2 172 aa6.84□□□□□ -1.32
ATP2C1-204ENST00000428331 NDUFS5O43920 106 aa6.83□□□□□ -1.32
ATP2C1-204ENST00000428331 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
ATP2C1-204ENST00000428331 A8MWP4 228 aa6.82□□□□□ -1.32
ATP2C1-204ENST00000428331 VWFP04275 2813 aa6.81□□□□□ -1.32
ATP2C1-204ENST00000428331 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
ATP2C1-204ENST00000428331 IGLV8-61A0A075B6I0 122 aa6.79□□□□□ -1.32
ATP2C1-204ENST00000428331 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
ATP2C1-204ENST00000428331 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
ATP2C1-204ENST00000428331 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
ATP2C1-204ENST00000428331 KRTAP7-1Q8IUC3 87 aa6.77□□□□□ -1.33
ATP2C1-204ENST00000428331 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
ATP2C1-204ENST00000428331 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
ATP2C1-204ENST00000428331 IGLV9-49A0A0B4J1Y8 123 aa6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 COA5Q86WW8 74 aa6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 PDZD2O15018 2839 aa6.74□□□□□ -1.33
ATP2C1-204ENST00000428331 CHTF8P0CG12 524 aa6.73□□□□□ -1.33
ATP2C1-204ENST00000428331 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
ATP2C1-204ENST00000428331 NOTCH1P46531 2555 aa6.73□□□□□ -1.33
ATP2C1-204ENST00000428331 FLNBO75369 2602 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-204ENST00000428331 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-204ENST00000428331 Q5VV11 94 aa6.72□□□□□ -1.33
ATP2C1-204ENST00000428331 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.33
ATP2C1-204ENST00000428331 TENM1Q9UKZ4 2725 aa6.71□□□□□ -1.34
ATP2C1-204ENST00000428331 AKAP9Q99996 3911 aa6.71□□□□□ -1.34
ATP2C1-204ENST00000428331 MOBPQ13875 183 aa6.71□□□□□ -1.34
ATP2C1-204ENST00000428331 KTN1-AS1Q86SY8 53 aa6.71□□□□□ -1.34
ATP2C1-204ENST00000428331 SPRR1BP22528 89 aa6.7□□□□□ -1.34
ATP2C1-204ENST00000428331 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
ATP2C1-204ENST00000428331 MAST4O15021 2626 aa6.69□□□□□ -1.34
ATP2C1-204ENST00000428331 KRTAP24-1Q3LI83 254 aa6.69□□□□□ -1.34
ATP2C1-204ENST00000428331 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
ATP2C1-204ENST00000428331 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
ATP2C1-204ENST00000428331 NBPF19A0A087WUL8 3843 aa6.68□□□□□ -1.34
ATP2C1-204ENST00000428331 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
ATP2C1-204ENST00000428331 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
ATP2C1-204ENST00000428331 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
ATP2C1-204ENST00000428331 LOC101927531A0A1B0GV80 90 aa6.67□□□□□ -1.34
ATP2C1-204ENST00000428331 STAB1Q9NY15 2570 aa6.67□□□□□ -1.34
ATP2C1-204ENST00000428331 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
ATP2C1-204ENST00000428331 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
ATP2C1-204ENST00000428331 C9orf163Q8N9P6 203 aa6.66□□□□□ -1.34
ATP2C1-204ENST00000428331 Q75L30 129 aa6.65□□□□□ -1.35
ATP2C1-204ENST00000428331 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-204ENST00000428331 TENM4Q6N022 2769 aa6.64□□□□□ -1.35
ATP2C1-204ENST00000428331 PKD1L1Q8TDX9 2849 aa6.64□□□□□ -1.35
ATP2C1-204ENST00000428331 KMT2BQ9UMN6 2715 aaPredicted RBP6.63□□□□□ -1.35
ATP2C1-204ENST00000428331 SPINK6Q6UWN8 80 aa6.62□□□□□ -1.35
ATP2C1-204ENST00000428331 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
ATP2C1-204ENST00000428331 A0A1B0GVX0 72 aa6.62□□□□□ -1.35
ATP2C1-204ENST00000428331 COL6A5A8TX70 2615 aa6.61□□□□□ -1.35
ATP2C1-204ENST00000428331 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
ATP2C1-204ENST00000428331 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
ATP2C1-204ENST00000428331 K7EIL1 84 aa6.6□□□□□ -1.35
ATP2C1-204ENST00000428331 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
ATP2C1-204ENST00000428331 LCA10Q71F78 164 aa6.59□□□□□ -1.35
ATP2C1-204ENST00000428331 RETNLBQ9BQ08 111 aa6.58□□□□□ -1.36
ATP2C1-204ENST00000428331 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
ATP2C1-204ENST00000428331 KRTAP11-1Q8IUC1 163 aa6.58□□□□□ -1.36
ATP2C1-204ENST00000428331 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
ATP2C1-204ENST00000428331 NBDYA0A0U1RRE5 68 aa6.57□□□□□ -1.36
ATP2C1-204ENST00000428331 C7orf65Q6ZTY9 151 aa6.57□□□□□ -1.36
ATP2C1-204ENST00000428331 A8MU10 97 aa6.57□□□□□ -1.36
ATP2C1-204ENST00000428331 OTOGQ6ZRI0 2925 aa6.56□□□□□ -1.36
ATP2C1-204ENST00000428331 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
ATP2C1-204ENST00000428331 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
ATP2C1-204ENST00000428331 ACYP2P14621 99 aa6.55□□□□□ -1.36
ATP2C1-204ENST00000428331 Q6ZR54 194 aa6.54□□□□□ -1.36
ATP2C1-204ENST00000428331 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
ATP2C1-204ENST00000428331 HRES1P13985 223 aa6.52□□□□□ -1.37
ATP2C1-204ENST00000428331 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
ATP2C1-204ENST00000428331 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
ATP2C1-204ENST00000428331 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
ATP2C1-204ENST00000428331 ZNF861PO60384 105 aa6.5□□□□□ -1.37
ATP2C1-204ENST00000428331 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 STAB2Q8WWQ8 2551 aa6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 Q96NJ1 140 aa6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 PSORS1C2Q9UIG4 136 aa6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
ATP2C1-204ENST00000428331 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
ATP2C1-204ENST00000428331 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
ATP2C1-204ENST00000428331 PANO1I0J062 215 aa6.47□□□□□ -1.37
ATP2C1-204ENST00000428331 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
ATP2C1-204ENST00000428331 SPINK7P58062 85 aa6.47□□□□□ -1.37
ATP2C1-204ENST00000428331 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
ATP2C1-204ENST00000428331 A0A1B0GU69 56 aa6.46□□□□□ -1.37
ATP2C1-204ENST00000428331 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
ATP2C1-204ENST00000428331 RTL8CO15255 209 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms