RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
LINC01953-201ENST00000426870 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
LINC01953-201ENST00000426870 MMP24-AS1A0A0U1RRL7 71 aa0.71□□□□□ -2.3
LINC01953-201ENST00000426870 POLR2KP53803 58 aaKnown RBP0.71□□□□□ -2.3
LINC01953-201ENST00000426870 DEFB104AQ8WTQ1 72 aa0.71□□□□□ -2.3
LINC01953-201ENST00000426870 A0A0D9SG42 100 aa0.7□□□□□ -2.3
LINC01953-201ENST00000426870 WT1-ASQ06250 92 aa0.7□□□□□ -2.3
LINC01953-201ENST00000426870 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
LINC01953-201ENST00000426870 IGLV5-48A0A075B6I7 105 aa0.69□□□□□ -2.3
LINC01953-201ENST00000426870 A8MTW9 85 aa0.69□□□□□ -2.3
LINC01953-201ENST00000426870 Q5VSD8 79 aa0.69□□□□□ -2.3
LINC01953-201ENST00000426870 DEFB106AQ8N104 65 aa0.69□□□□□ -2.3
LINC01953-201ENST00000426870 S4R3F8 94 aa0.69□□□□□ -2.3
LINC01953-201ENST00000426870 SPINK1P00995 79 aa0.68□□□□□ -2.3
LINC01953-201ENST00000426870 CNTRLQ7Z7A1 2325 aa0.68□□□□□ -2.3
LINC01953-201ENST00000426870 PIEZO2Q9H5I5 2752 aa0.68□□□□□ -2.3
LINC01953-201ENST00000426870 TOMM7Q9P0U1 55 aa0.68□□□□□ -2.3
LINC01953-201ENST00000426870 DOPEY2Q9Y3R5 2298 aa0.68□□□□□ -2.3
LINC01953-201ENST00000426870 CNOT1A5YKK6 2376 aaKnown RBP0.67□□□□□ -2.3
LINC01953-201ENST00000426870 ZDBF2Q9HCK1 2354 aa0.67□□□□□ -2.3
LINC01953-201ENST00000426870 DEFB131AP59861 70 aa0.67□□□□□ -2.3
LINC01953-201ENST00000426870 PTPRQQ9UMZ3 2332 aa0.66□□□□□ -2.3
LINC01953-201ENST00000426870 JMJD1CQ15652 2540 aa0.66□□□□□ -2.3
LINC01953-201ENST00000426870 H3BUA1 57 aa0.66□□□□□ -2.3
LINC01953-201ENST00000426870 PRCDQ00LT1 54 aa0.66□□□□□ -2.3
LINC01953-201ENST00000426870 FAM208BQ5VWN6 2430 aa0.66□□□□□ -2.3
LINC01953-201ENST00000426870 M0QY20 66 aa0.65□□□□□ -2.31
LINC01953-201ENST00000426870 CLPSL2Q6UWE3 100 aa0.65□□□□□ -2.31
LINC01953-201ENST00000426870 REV3LO60673 3130 aa0.65□□□□□ -2.31
LINC01953-201ENST00000426870 AHCTF1Q8WYP5 2266 aa0.64□□□□□ -2.31
LINC01953-201ENST00000426870 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
LINC01953-201ENST00000426870 ASH1LQ9NR48 2969 aaKnown RBP0.63□□□□□ -2.31
LINC01953-201ENST00000426870 NAV3Q8IVL0 2385 aa0.62□□□□□ -2.31
LINC01953-201ENST00000426870 DEFB109BQ30KR1 87 aa0.62□□□□□ -2.31
LINC01953-201ENST00000426870 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
LINC01953-201ENST00000426870 PLCE1Q9P212 2302 aa0.61□□□□□ -2.31
LINC01953-201ENST00000426870 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
LINC01953-201ENST00000426870 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
LINC01953-201ENST00000426870 PCNX1Q96RV3 2341 aa0.61□□□□□ -2.31
LINC01953-201ENST00000426870 IGF2RP11717 2491 aa0.61□□□□□ -2.31
LINC01953-201ENST00000426870 A0A0C4DFX4 3053 aa0.61□□□□□ -2.31
LINC01953-201ENST00000426870 RPL39P5Q59GN2 51 aa0.6□□□□□ -2.31
LINC01953-201ENST00000426870 NOP10Q9NPE3 64 aaKnown RBP0.6□□□□□ -2.31
LINC01953-201ENST00000426870 ZNF462Q96JM2 2506 aa0.6□□□□□ -2.31
LINC01953-201ENST00000426870 DEFB108AA8MXU0 73 aa0.59□□□□□ -2.31
LINC01953-201ENST00000426870 DSPP15924 2871 aaKnown RBP0.59□□□□□ -2.32
LINC01953-201ENST00000426870 CELSR2Q9HCU4 2923 aa0.58□□□□□ -2.32
LINC01953-201ENST00000426870 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
LINC01953-201ENST00000426870 TMEM167AQ8TBQ9 72 aa0.58□□□□□ -2.32
LINC01953-201ENST00000426870 TRANK1O15050 2925 aa0.58□□□□□ -2.32
LINC01953-201ENST00000426870 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
LINC01953-201ENST00000426870 TPRP12270 2363 aaKnown RBP0.57□□□□□ -2.32
LINC01953-201ENST00000426870 CHD7Q9P2D1 2997 aa0.57□□□□□ -2.32
LINC01953-201ENST00000426870 KNL1Q8NG31 2342 aa0.57□□□□□ -2.32
LINC01953-201ENST00000426870 K7EIM0 57 aa0.57□□□□□ -2.32
LINC01953-201ENST00000426870 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
LINC01953-201ENST00000426870 H0YGG7 62 aa0.56□□□□□ -2.32
LINC01953-201ENST00000426870 APELAP0DMC3 54 aa0.56□□□□□ -2.32
LINC01953-201ENST00000426870 PDE4DIPQ5VU43 2346 aa0.56□□□□□ -2.32
LINC01953-201ENST00000426870 C2CD3Q4AC94 2353 aa0.56□□□□□ -2.32
LINC01953-201ENST00000426870 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
LINC01953-201ENST00000426870 CSMD3Q7Z407 3707 aa0.55□□□□□ -2.32
LINC01953-201ENST00000426870 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
LINC01953-201ENST00000426870 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
LINC01953-201ENST00000426870 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
LINC01953-201ENST00000426870 LYSTQ99698 3801 aa0.54□□□□□ -2.32
LINC01953-201ENST00000426870 ZNF292O60281 2723 aa0.54□□□□□ -2.32
LINC01953-201ENST00000426870 TTC28Q96AY4 2481 aa0.54□□□□□ -2.32
LINC01953-201ENST00000426870 ANK2Q01484 3957 aa0.53□□□□□ -2.32
LINC01953-201ENST00000426870 M0R2T5 61 aa0.53□□□□□ -2.32
LINC01953-201ENST00000426870 DEFB1P60022 68 aa0.53□□□□□ -2.32
LINC01953-201ENST00000426870 AKAP13Q12802 2813 aa0.53□□□□□ -2.32
LINC01953-201ENST00000426870 OTOGQ6ZRI0 2925 aa0.53□□□□□ -2.32
LINC01953-201ENST00000426870 CSPG4Q6UVK1 2322 aa0.53□□□□□ -2.33
LINC01953-201ENST00000426870 CACNA1HO95180 2353 aa0.53□□□□□ -2.33
LINC01953-201ENST00000426870 FSIP2Q5CZC0 6907 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 MACF1Q9UPN3 7388 aaKnown RBP0.52□□□□□ -2.33
LINC01953-201ENST00000426870 F8P00451 2351 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 SPTBN1Q01082 2364 aaKnown RBP0.52□□□□□ -2.33
LINC01953-201ENST00000426870 ZFHX4Q86UP3 3567 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 STATHP02808 62 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 BSNQ9UPA5 3926 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 TNRC18O15417 2968 aaPredicted RBP0.52□□□□□ -2.33
LINC01953-201ENST00000426870 SPTBN2O15020 2390 aa0.52□□□□□ -2.33
LINC01953-201ENST00000426870 A0A096LNI7 61 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 M0QZ58 72 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 EP300Q09472 2414 aaPredicted RBP0.51□□□□□ -2.33
LINC01953-201ENST00000426870 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 SPINK6Q6UWN8 80 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 KRTAP19-3Q7Z4W3 81 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 MYCBP2O75592 4640 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 PDZD2O15018 2839 aa0.51□□□□□ -2.33
LINC01953-201ENST00000426870 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
LINC01953-201ENST00000426870 UBR5O95071 2799 aaPredicted RBP0.5□□□□□ -2.33
LINC01953-201ENST00000426870 POLQO75417 2590 aa0.5□□□□□ -2.33
LINC01953-201ENST00000426870 H3BNG1 76 aa0.5□□□□□ -2.33
LINC01953-201ENST00000426870 PRM1P04553 51 aa0.5□□□□□ -2.33
LINC01953-201ENST00000426870 HTN1P15515 57 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms